EnhancerDB
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  3. vista53077[chr6:109852596-109852917]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53077[chr6:109852596-109852917]
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Tissue distribution of vista53077
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Transcription factor that possibly regulate vista53077[chr6:109852596-109852917]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 109852625 109852629 H4TF2 TRANSFAC yes 70415424
chr6 109852643 109852653 TFEB JASPAR yes 70415425
chr6 109852643 109852653 TFEC JASPAR yes 70415426
chr6 109852643 109852654 USF2 JASPAR yes 70415427
chr6 109852675 109852687 TAL1 JASPAR yes 70415428
chr6 109852675 109852688 ZBTB18 JASPAR yes 70415429
chr6 109852677 109852687 FIGLA JASPAR yes 70415430
chr6 109852677 109852687 MSC JASPAR yes 70415431
chr6 109852677 109852687 MYF6 JASPAR yes 70415432
chr6 109852677 109852687 TFAP4 JASPAR yes 70415433
chr6 109852677 109852689 TAL1 JASPAR yes 70415434
chr6 109852687 109852691 NFE TRANSFAC yes 70415435
chr6 109852709 109852724 RUNX2 JASPAR yes 70415436
chr6 109852717 109852732 FOXA1 JASPAR yes 70415437
chr6 109852717 109852732 MEF2A JASPAR yes 70415438
chr6 109852718 109852730 FOXI1 JASPAR yes 70415439
chr6 109852718 109852733 MEF2C JASPAR yes 70415440
chr6 109852719 109852731 MEF2A JASPAR yes 70415441
chr6 109852719 109852731 MEF2B JASPAR yes 70415442
chr6 109852719 109852731 MEF2D JASPAR yes 70415443
chr6 109852720 109852730 MEF2A JASPAR yes 70415444
chr6 109852720 109852731 FOXB1 JASPAR yes 70415445
chr6 109852720 109852731 FOXC1 JASPAR yes 70415446
chr6 109852721 109852725 YY1 TRANSFAC yes 70415447
chr6 109852725 109852739 POU1F1 JASPAR yes 70415448
chr6 109852726 109852738 POU3F2 JASPAR yes 70415449
chr6 109852728 109852740 MEF2A JASPAR yes 70415450
chr6 109852735 109852744 SRY JASPAR yes 70415451
chr6 109852750 109852754 YY1 TRANSFAC yes 70415452
chr6 109852760 109852778 ESR1 JASPAR yes 70415453
chr6 109852771 109852782 PHOX2A JASPAR yes 70415454
chr6 109852771 109852782 PROP1 JASPAR yes 70415455
chr6 109852777 109852781 YY1 TRANSFAC yes 70415456
chr6 109852780 109852789 NKX2-8 JASPAR yes 70415457
chr6 109852780 109852790 NKX2-3 JASPAR yes 70415458
chr6 109852781 109852789 ISL2 JASPAR yes 70415459
chr6 109852781 109852790 NKX3-2 JASPAR yes 70415460
chr6 109852841 109852845 YY1 TRANSFAC yes 70415461
chr6 109852846 109852850 NFE TRANSFAC yes 70415462
chr6 109852859 109852864 H4TF1 TRANSFAC yes 70415463
chr6 109852875 109852889 RORA JASPAR yes 70415464
SNP sites on vista53077[chr6:109852596-109852917]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 109852613 rs73523129 C T no 9253805
chr6 109852650 rs73523131 T C
TFEB TFEC USF2
9253806
chr6 109852793 rs192314937 A T no 9253807
chr6 109852916 rs749517 G A no 9253808
Genes possibly regulated by vista53077[chr6:109852596-109852917]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 109711418 109762374 - PPIL6 ENSG00000185250.11 109762374 0.88 1.0 6857 9778
chr6 109761966 109765122 + SMPD2 ENSG00000135587.4 109761966 0.65 1.0 6858 9370
chr6 109765265 109787171 - MICAL1 ENSG00000135596.13 109787171 0.81 1.0 6859 34575
chr6 109783797 109804440 - ZBTB24 ENSG00000112365.4 109804440 0.65 0.99 6860 51844
Expression level of Genes
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miRNAs possibly regulated by vista53077[chr6:109852596-109852917]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results