EnhancerDB
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  3. vista53085[chr6:110215629-110215882]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53085[chr6:110215629-110215882]
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Tissue distribution of vista53085
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Transcription factor that possibly regulate vista53085[chr6:110215629-110215882]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 110215627 110215636 THAP1 JASPAR yes 70415699
chr6 110215627 110215636 THAP1 JASPAR yes 104265659
chr6 110215628 110215639 FOXA1 JASPAR yes 70415700
chr6 110215628 110215639 FOXA1 JASPAR yes 104265660
chr6 110215628 110215643 FOXA1 JASPAR yes 70415701
chr6 110215628 110215643 FOXA1 JASPAR yes 104265661
chr6 110215630 110215634 LFA1 TRANSFAC yes 70415702
chr6 110215630 110215634 LFA1 TRANSFAC yes 104265662
chr6 110215650 110215664 TCF7L2 JASPAR yes 70415703
chr6 110215650 110215664 TCF7L2 JASPAR yes 104265663
chr6 110215655 110215661 SOX10 JASPAR yes 70415704
chr6 110215655 110215661 SOX10 JASPAR yes 104265664
chr6 110215658 110215671 ZBTB18 JASPAR yes 70415705
chr6 110215658 110215671 ZBTB18 JASPAR yes 104265665
chr6 110215660 110215670 MYF6 JASPAR yes 70415706
chr6 110215660 110215670 MYF6 JASPAR yes 104265666
chr6 110215661 110215674 SCRT2 JASPAR yes 70415707
chr6 110215661 110215674 SCRT2 JASPAR yes 104265667
chr6 110215662 110215667 MYC TRANSFAC yes 70415708
chr6 110215662 110215667 MYC TRANSFAC yes 104265668
chr6 110215670 110215686 SOX4 JASPAR yes 70415709
chr6 110215670 110215686 SOX4 JASPAR yes 104265669
chr6 110215675 110215683 MEIS3 JASPAR yes 70415710
chr6 110215675 110215683 MEIS3 JASPAR yes 104265670
chr6 110215683 110215694 NFIL3 JASPAR yes 70415711
chr6 110215683 110215694 NFIL3 JASPAR yes 104265671
chr6 110215687 110215704 PAX1 JASPAR yes 70415712
chr6 110215687 110215704 PAX9 JASPAR yes 70415713
chr6 110215687 110215704 PAX1 JASPAR yes 104265672
chr6 110215687 110215704 PAX9 JASPAR yes 104265673
chr6 110215688 110215691 MYB TRANSFAC yes 70415714
chr6 110215688 110215691 MYB TRANSFAC yes 104265674
chr6 110215702 110215715 NR2F1 JASPAR yes 70415715
chr6 110215702 110215715 NR2F1 JASPAR yes 104265675
chr6 110215705 110215713 NR4A2 JASPAR yes 70415716
chr6 110215705 110215713 NR4A2 JASPAR yes 104265676
chr6 110215729 110215750 IRF1 JASPAR yes 70415717
chr6 110215729 110215750 IRF1 JASPAR yes 104265677
chr6 110215733 110215747 SPI1 JASPAR yes 70415718
chr6 110215733 110215747 SPI1 JASPAR yes 104265678
chr6 110215733 110215748 STAT2 JASPAR yes 70415719
chr6 110215733 110215748 STAT2 JASPAR yes 104265679
chr6 110215742 110215753 NFIL3 JASPAR yes 70415720
chr6 110215742 110215753 NFIL3 JASPAR yes 104265680
chr6 110215754 110215768 POU4F1 JASPAR yes 70415721
chr6 110215754 110215768 POU4F1 JASPAR yes 104265681
chr6 110215754 110215770 POU4F3 JASPAR yes 70415722
chr6 110215754 110215770 POU4F3 JASPAR yes 104265682
chr6 110215761 110215771 MNX1 JASPAR yes 70415723
chr6 110215761 110215771 MNX1 JASPAR yes 104265683
chr6 110215767 110215771 TEAD2 TRANSFAC yes 70415724
chr6 110215767 110215771 TEAD2 TRANSFAC yes 104265684
chr6 110215778 110215794 SOX8 JASPAR yes 70415725
chr6 110215778 110215794 SOX8 JASPAR yes 104265685
chr6 110215781 110215786 ETS2 TRANSFAC yes 70415726
chr6 110215781 110215786 ETS2 TRANSFAC yes 104265686
chr6 110215784 110215793 SOX9 JASPAR yes 70415727
chr6 110215784 110215793 SOX9 JASPAR yes 104265687
chr6 110215797 110215818 ZNF263 JASPAR yes 70415728
chr6 110215797 110215818 ZNF263 JASPAR yes 104265688
chr6 110215809 110215819 MZF1 JASPAR yes 70415729
chr6 110215809 110215819 MZF1 JASPAR yes 104265689
chr6 110215812 110215833 ZNF263 JASPAR yes 70415730
chr6 110215812 110215833 ZNF263 JASPAR yes 104265690
chr6 110215820 110215834 IRF7 JASPAR yes 70415731
chr6 110215820 110215834 IRF8 JASPAR yes 70415732
chr6 110215820 110215834 IRF7 JASPAR yes 104265691
chr6 110215820 110215834 IRF8 JASPAR yes 104265692
chr6 110215823 110215838 STAT2 JASPAR yes 70415733
chr6 110215823 110215838 STAT2 JASPAR yes 104265693
chr6 110215833 110215853 RREB1 JASPAR yes 70415734
chr6 110215833 110215853 RREB1 JASPAR yes 104265694
chr6 110215834 110215855 IRF1 JASPAR yes 70415735
chr6 110215834 110215855 IRF1 JASPAR yes 104265695
chr6 110215835 110215850 FOXP1 JASPAR yes 70415736
chr6 110215835 110215850 FOXP1 JASPAR yes 104265696
chr6 110215836 110215851 STAT2 JASPAR yes 70415737
chr6 110215836 110215851 STAT2 JASPAR yes 104265697
chr6 110215838 110215850 IRF1 JASPAR yes 70415738
chr6 110215838 110215850 IRF1 JASPAR yes 104265698
chr6 110215840 110215846 TCF4 TRANSFAC yes 70415739
chr6 110215840 110215846 TCF4 TRANSFAC yes 104265699
chr6 110215840 110215855 FOXP1 JASPAR yes 70415740
chr6 110215840 110215855 FOXP1 JASPAR yes 104265700
chr6 110215841 110215852 FOXP2 JASPAR yes 70415741
chr6 110215841 110215852 FOXP2 JASPAR yes 104265701
chr6 110215852 110215857 GATA1 TRANSFAC yes 70415742
chr6 110215852 110215857 GATA1 TRANSFAC yes 104265702
chr6 110215865 110215869 YY1 TRANSFAC yes 70415743
chr6 110215865 110215869 YY1 TRANSFAC yes 104265703
chr6 110215870 110215882 NHLH1 JASPAR yes 70415744
chr6 110215870 110215882 NHLH1 JASPAR yes 104265704
chr6 110215871 110215881 NHLH1 JASPAR yes 70415745
chr6 110215871 110215881 NHLH1 JASPAR yes 104265705
chr6 110215879 110215883 NFE TRANSFAC yes 70415746
chr6 110215879 110215883 NFE TRANSFAC yes 104265706
SNP sites on vista53085[chr6:110215629-110215882]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 110215641 rs530722387 G A
FOXA1
9255106
chr6 110215738 rs142998394 A G
IRF1 SPI1 STAT2
9255107
chr6 110215863 rs147458698 C G no 9255108
Genes possibly regulated by vista53085[chr6:110215629-110215882]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 110299514 110301921 + GPR6 ENSG00000146360.7 110299514 0.97 0.0 6863 16368
Expression level of Genes
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miRNAs possibly regulated by vista53085[chr6:110215629-110215882]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results