EnhancerDB
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  3. vista53086[chr6:110360700-110361043]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53086[chr6:110360700-110361043]
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Tissue distribution of vista53086
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Transcription factor that possibly regulate vista53086[chr6:110360700-110361043]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 110360593 110361015 CTCF UCSC Txn Factor no Conserved 108541267
chr6 110360672 110360936 RAD21 UCSC Txn Factor no Conserved 108541268
chr6 110360681 110360952 RUNX3 UCSC Txn Factor no Conserved 108541269
chr6 110360684 110360954 SMC3 UCSC Txn Factor no Conserved 108541270
chr6 110360700 110360709 SRY JASPAR yes 70415747
chr6 110360700 110360709 SRY JASPAR yes 104271057
chr6 110360713 110360717 YY1 TRANSFAC yes 70415748
chr6 110360713 110360717 YY1 TRANSFAC yes 104271058
chr6 110360725 110360731 ETS1 JASPAR yes 70415749
chr6 110360725 110360731 SPI1 JASPAR yes 70415750
chr6 110360725 110360731 ETS1 JASPAR yes 104271059
chr6 110360725 110360731 SPI1 JASPAR yes 104271060
chr6 110360725 110360735 ELK1 JASPAR yes 70415751
chr6 110360725 110360735 ELK1 JASPAR yes 104271061
chr6 110360751 110360762 ETV2 JASPAR yes 70415752
chr6 110360751 110360762 ETV2 JASPAR yes 104271062
chr6 110360752 110360760 FEV JASPAR yes 70415753
chr6 110360752 110360760 FEV JASPAR yes 104271063
chr6 110360754 110360761 SPIB JASPAR yes 70415754
chr6 110360754 110360761 SPIB JASPAR yes 104271064
chr6 110360775 110360786 RUNX1 JASPAR yes 70415755
chr6 110360775 110360786 RUNX1 JASPAR yes 104271065
chr6 110360791 110360810 CTCF JASPAR yes 70415756
chr6 110360791 110360810 CTCF JASPAR yes 104271066
chr6 110360802 110360821 CTCF JASPAR yes 70415757
chr6 110360802 110360821 CTCF JASPAR yes 104271067
chr6 110360822 110360834 INSM1 JASPAR yes 70415758
chr6 110360822 110360834 INSM1 JASPAR yes 104271068
chr6 110360829 110360833 ESR1 TRANSFAC yes 70415759
chr6 110360829 110360833 ESR1 TRANSFAC yes 104271069
chr6 110360867 110360881 STAT1 JASPAR yes 70415760
chr6 110360867 110360881 STAT1 JASPAR yes 104271070
chr6 110360874 110360885 ETV2 JASPAR yes 70415761
chr6 110360874 110360885 ETV2 JASPAR yes 104271071
chr6 110360874 110360888 SPIC JASPAR yes 70415762
chr6 110360874 110360888 SPIC JASPAR yes 104271072
chr6 110360875 110360883 FEV JASPAR yes 70415763
chr6 110360875 110360883 FEV JASPAR yes 104271073
chr6 110360877 110360884 SPIB JASPAR yes 70415764
chr6 110360877 110360884 SPIB JASPAR yes 104271074
chr6 110360887 110360891 TEAD2 TRANSFAC yes 70415765
chr6 110360887 110360891 TEAD2 TRANSFAC yes 104271075
chr6 110360902 110360915 DUXA JASPAR yes 70415766
chr6 110360902 110360915 DUXA JASPAR yes 104271076
chr6 110360903 110360914 DUX4 JASPAR yes 70415767
chr6 110360903 110360914 DUX4 JASPAR yes 104271077
chr6 110360904 110360909 NFY TRANSFAC yes 70415768
chr6 110360904 110360909 NFY TRANSFAC yes 104271078
chr6 110360906 110360916 GSC2 JASPAR yes 70415769
chr6 110360906 110360916 GSC JASPAR yes 70415770
chr6 110360906 110360916 GSC2 JASPAR yes 104271079
chr6 110360906 110360916 GSC JASPAR yes 104271080
chr6 110360907 110360916 PITX3 JASPAR yes 70415771
chr6 110360907 110360916 PITX3 JASPAR yes 104271081
chr6 110360979 110360989 TEAD1 JASPAR yes 70415772
chr6 110360979 110360989 TEAD4 JASPAR yes 70415773
chr6 110360979 110360989 TEAD1 JASPAR yes 104271082
chr6 110360979 110360989 TEAD4 JASPAR yes 104271083
chr6 110360979 110360991 TEAD1 JASPAR yes 70415774
chr6 110360979 110360991 TEAD1 JASPAR yes 104271084
chr6 110360987 110360997 TBX21 JASPAR yes 70415775
chr6 110360987 110360997 TBX21 JASPAR yes 104271085
chr6 110360987 110360998 TBX20 JASPAR yes 70415776
chr6 110360987 110360998 TBX2 JASPAR yes 70415777
chr6 110360987 110360998 TBX20 JASPAR yes 104271086
chr6 110360987 110360998 TBX2 JASPAR yes 104271087
chr6 110360988 110360996 MGA JASPAR yes 70415778
chr6 110360988 110360996 TBX15 JASPAR yes 70415779
chr6 110360988 110360996 TBX1 JASPAR yes 70415780
chr6 110360988 110360996 TBX4 JASPAR yes 70415781
chr6 110360988 110360996 TBX5 JASPAR yes 70415782
chr6 110360988 110360996 MGA JASPAR yes 104271088
chr6 110360988 110360996 TBX15 JASPAR yes 104271089
chr6 110360988 110360996 TBX1 JASPAR yes 104271090
chr6 110360988 110360996 TBX4 JASPAR yes 104271091
chr6 110360988 110360996 TBX5 JASPAR yes 104271092
chr6 110360988 110361005 ZNF410 JASPAR yes 70415783
chr6 110360988 110361005 ZNF410 JASPAR yes 104271093
chr6 110361021 110361026 TFAP2A TRANSFAC yes 70415784
chr6 110361021 110361026 TFAP2A TRANSFAC yes 104271094
chr6 110361021 110361027 MZF1 JASPAR yes 70415785
chr6 110361021 110361027 MZF1 JASPAR yes 104271095
chr6 110361023 110361028 ETS2 TRANSFAC yes 70415786
chr6 110361023 110361028 ETS2 TRANSFAC yes 104271096
chr6 110361037 110361053 SRF JASPAR yes 70415787
chr6 110361037 110361053 SRF JASPAR yes 104271097
SNP sites on vista53086[chr6:110360700-110361043]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 110360771 rs551826257 G A
CTCF RAD21 RUNX3 SMC3
9255628
chr6 110360819 rs537987466 C G
CTCF RAD21 RUNX3 SMC3
9255629
chr6 110360839 rs548639872 T C
CTCF RAD21 RUNX3 SMC3
9255630
chr6 110360917 rs191245490 G A
CTCF RAD21 RUNX3 SMC3
9255631
Genes possibly regulated by vista53086[chr6:110360700-110361043]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 110299514 110301921 + GPR6 ENSG00000146360.7 110299514 0.97 0.0 6863 38814
Expression level of Genes
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miRNAs possibly regulated by vista53086[chr6:110360700-110361043]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results