EnhancerDB
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  3. vista53095[chr6:110617169-110617340]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53095[chr6:110617169-110617340]
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Tissue distribution of vista53095
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Transcription factor that possibly regulate vista53095[chr6:110617169-110617340]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 110617157 110617171 RORA JASPAR yes 70416102
chr6 110617157 110617171 RORA JASPAR yes 104282019
chr6 110617191 110617202 DMRT3 JASPAR yes 70416103
chr6 110617191 110617202 DMRT3 JASPAR yes 104282020
chr6 110617207 110617211 YY1 TRANSFAC yes 70416104
chr6 110617207 110617211 YY1 TRANSFAC yes 104282021
chr6 110617211 110617214 MYB TRANSFAC yes 70416105
chr6 110617211 110617214 MYB TRANSFAC yes 104282022
chr6 110617245 110617256 NFE2 JASPAR yes 70416106
chr6 110617245 110617256 NFE2 JASPAR yes 104282023
chr6 110617251 110617265 TLX1 JASPAR yes 70416107
chr6 110617251 110617265 TLX1 JASPAR yes 104282024
chr6 110617261 110617276 NFYB JASPAR yes 70416108
chr6 110617261 110617276 NFYB JASPAR yes 104282025
chr6 110617263 110617278 FOXA1 JASPAR yes 70416109
chr6 110617263 110617278 FOXA1 JASPAR yes 104282026
chr6 110617263 110617279 NFYA JASPAR yes 70416110
chr6 110617263 110617279 NFYA JASPAR yes 104282027
chr6 110617268 110617272 H1TF2 TRANSFAC yes 70416111
chr6 110617268 110617272 NFE TRANSFAC yes 70416112
chr6 110617268 110617272 SRF TRANSFAC yes 70416113
chr6 110617268 110617272 H1TF2 TRANSFAC yes 104282028
chr6 110617268 110617272 NFE TRANSFAC yes 104282029
chr6 110617268 110617272 SRF TRANSFAC yes 104282030
chr6 110617285 110617296 TBX20 JASPAR yes 70416114
chr6 110617285 110617296 TBX20 JASPAR yes 104282031
chr6 110617296 110617307 HOXC13 JASPAR yes 70416115
chr6 110617296 110617307 HOXC13 JASPAR yes 104282032
chr6 110617297 110617307 EMX1 JASPAR yes 70416116
chr6 110617297 110617307 EMX1 JASPAR yes 104282033
chr6 110617298 110617306 NKX6-1 JASPAR yes 70416117
chr6 110617298 110617306 NKX6-2 JASPAR yes 70416118
chr6 110617298 110617306 NKX6-1 JASPAR yes 104282034
chr6 110617298 110617306 NKX6-2 JASPAR yes 104282035
chr6 110617298 110617308 POU6F2 JASPAR yes 70416119
chr6 110617298 110617308 POU6F2 JASPAR yes 104282036
chr6 110617299 110617310 PROP1 JASPAR yes 70416120
chr6 110617299 110617310 PROP1 JASPAR yes 104282037
chr6 110617316 110617331 TFAP2C JASPAR yes 70416121
chr6 110617316 110617331 TFAP2C JASPAR yes 104282038
chr6 110617318 110617330 TFAP2A JASPAR yes 70416122
chr6 110617318 110617330 TFAP2B JASPAR yes 70416123
chr6 110617318 110617330 TFAP2C JASPAR yes 70416124
chr6 110617318 110617330 TFAP2A JASPAR yes 104282039
chr6 110617318 110617330 TFAP2B JASPAR yes 104282040
chr6 110617318 110617330 TFAP2C JASPAR yes 104282041
chr6 110617318 110617333 TFAP2A JASPAR yes 70416125
chr6 110617318 110617333 TFAP2A JASPAR yes 104282042
chr6 110617319 110617330 TFAP2A JASPAR yes 70416126
chr6 110617319 110617330 TFAP2B JASPAR yes 70416127
chr6 110617319 110617330 TFAP2C JASPAR yes 70416128
chr6 110617319 110617330 TFAP2A JASPAR yes 104282043
chr6 110617319 110617330 TFAP2B JASPAR yes 104282044
chr6 110617319 110617330 TFAP2C JASPAR yes 104282045
SNP sites on vista53095[chr6:110617169-110617340]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 110617179 rs75461090 A C no 9256667
chr6 110617193 rs578130323 AAGTATCATTGTCCTCATTTAACTGACAATCAAATTGAGTGCCAG A
DMRT3
9256668
chr6 110617260 rs116303378 C T
TLX1
9256669
chr6 110617324 rs75303570 T C
TFAP2A TFAP2B TFAP2C
9256670
Genes possibly regulated by vista53095[chr6:110617169-110617340]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 110567131 110679475 - METTL24 ENSG00000053328.8 110679475 0.85 1.0 6866 37865
Expression level of Genes
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miRNAs possibly regulated by vista53095[chr6:110617169-110617340]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results