EnhancerDB
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  3. vista531[chr1:16669074-16669169]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista531[chr1:16669074-16669169]
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Tissue distribution of vista531
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Transcription factor that possibly regulate vista531[chr1:16669074-16669169]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 16669074 16669089 FOXP1 JASPAR yes 118239086
chr1 16669075 16669090 FOXP1 JASPAR yes 118239087
chr1 16669076 16669091 FOXP1 JASPAR yes 118239088
chr1 16669076 16669097 IRF1 JASPAR yes 118239089
chr1 16669077 16669092 FOXP1 JASPAR yes 118239090
chr1 16669078 16669093 FOXP1 JASPAR yes 118239091
chr1 16669078 16669099 IRF1 JASPAR yes 118239092
chr1 16669079 16669094 FOXP1 JASPAR yes 118239093
chr1 16669082 16669097 PRDM1 JASPAR yes 118239094
chr1 16669082 16669097 STAT2 JASPAR yes 118239095
chr1 16669107 16669128 ZNF263 JASPAR yes 118239096
chr1 16669108 16669129 ZNF263 JASPAR yes 118239097
chr1 16669117 16669123 TCF4 TRANSFAC yes 118239098
chr1 16669124 16669137 NR2F1 JASPAR yes 118239099
chr1 16669128 16669138 RORA JASPAR yes 118239100
chr1 16669142 16669152 MZF1 JASPAR yes 118239101
chr1 16669151 16669159 HOXA5 JASPAR yes 118239102
chr1 16669152 16669162 EMX1 JASPAR yes 118239103
chr1 16669152 16669162 EMX2 JASPAR yes 118239104
chr1 16669152 16669162 GBX2 JASPAR yes 118239105
chr1 16669152 16669162 GSX1 JASPAR yes 118239106
chr1 16669152 16669162 GSX2 JASPAR yes 118239107
chr1 16669152 16669162 HOXB2 JASPAR yes 118239108
chr1 16669152 16669162 HOXB3 JASPAR yes 118239109
chr1 16669152 16669162 LHX6 JASPAR yes 118239110
chr1 16669152 16669162 MEOX1 JASPAR yes 118239111
chr1 16669152 16669162 MEOX2 JASPAR yes 118239112
chr1 16669152 16669162 MNX1 JASPAR yes 118239113
chr1 16669152 16669162 POU6F1 JASPAR yes 118239114
chr1 16669152 16669162 RAX JASPAR yes 118239115
chr1 16669153 16669161 LMX1A JASPAR yes 118239116
chr1 16669153 16669161 LMX1B JASPAR yes 118239117
chr1 16669153 16669161 NKX6-1 JASPAR yes 118239118
chr1 16669153 16669161 NKX6-2 JASPAR yes 118239119
chr1 16669153 16669161 PDX1 JASPAR yes 118239120
chr1 16669153 16669161 VAX1 JASPAR yes 118239121
chr1 16669153 16669161 VAX2 JASPAR yes 118239122
chr1 16669153 16669161 VSX1 JASPAR yes 118239123
chr1 16669154 16669164 PAX3 JASPAR yes 118239124
chr1 16669154 16669164 PAX7 JASPAR yes 118239125
chr1 16669154 16669165 PROP1 JASPAR yes 118239126
SNP sites on vista531[chr1:16669074-16669169]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 16669076 rs397702501 C CA
FOXP1 IRF1
111773
chr1 16669076 rs528143177 C CA
FOXP1 IRF1
111774
chr1 16669076 rs58125011 C CA
FOXP1 IRF1
111775
chr1 16669094 rs12135674 G A
FOXP1 IRF1 PRDM1 STAT2
111776
Genes possibly regulated by vista531[chr1:16669074-16669169]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 16573334 16678949 - FBXO42 ENSG00000037637.6 16678949 0.55 1.0 229 90220
chr1 16679070 16724640 + SZRD1 ENSG00000055070.12 16679070 0.59 1.0 230 90099
chr1 16713612 16763919 - SPATA21 ENSG00000187144.7 16763919 0.91 1.0 231 5250
chr1 16767167 16786573 + NECAP2 ENSG00000157191.15 16767167 0.64 0.99 232 2002
Expression level of Genes
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miRNAs possibly regulated by vista531[chr1:16669074-16669169]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results