EnhancerDB
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  3. vista53101[chr6:110864475-110864588]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53101[chr6:110864475-110864588]
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Tissue distribution of vista53101
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Transcription factor that possibly regulate vista53101[chr6:110864475-110864588]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 110864489 110864493 NFE TRANSFAC yes 70416277
chr6 110864489 110864493 NFE TRANSFAC yes 104296220
chr6 110864509 110864521 GRHL1 JASPAR yes 70416278
chr6 110864509 110864521 GRHL1 JASPAR yes 104296221
chr6 110864510 110864520 TFCP2 JASPAR yes 70416279
chr6 110864510 110864520 TFCP2 JASPAR yes 104296222
chr6 110864524 110864536 IRF1 JASPAR yes 70416280
chr6 110864524 110864536 IRF1 JASPAR yes 104296223
chr6 110864524 110864538 IRF7 JASPAR yes 70416281
chr6 110864524 110864538 IRF7 JASPAR yes 104296224
chr6 110864527 110864541 TLX1 JASPAR yes 70416282
chr6 110864527 110864541 TLX1 JASPAR yes 104296225
chr6 110864528 110864542 TLX1 JASPAR yes 70416283
chr6 110864528 110864542 TLX1 JASPAR yes 104296226
chr6 110864533 110864551 ESR2 JASPAR yes 70416284
chr6 110864533 110864551 ESR2 JASPAR yes 104296227
chr6 110864534 110864546 YY1 JASPAR yes 70416285
chr6 110864534 110864546 YY1 JASPAR yes 104296228
chr6 110864535 110864555 ESR1 JASPAR yes 70416286
chr6 110864535 110864555 ESR1 JASPAR yes 104296229
chr6 110864539 110864543 YY1 TRANSFAC yes 70416287
chr6 110864539 110864543 YY1 TRANSFAC yes 104296230
chr6 110864545 110864554 TFAP2A JASPAR yes 70416288
chr6 110864545 110864554 TFAP2A JASPAR yes 104296231
chr6 110864550 110864554 LFA1 TRANSFAC yes 70416289
chr6 110864550 110864554 LFA1 TRANSFAC yes 104296232
chr6 110864582 110864601 CTCF JASPAR yes 70416290
chr6 110864582 110864601 CTCF JASPAR yes 104296233
SNP sites on vista53101[chr6:110864475-110864588]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 110864507 rs60898668 AG A no 9258050
chr6 110864507 rs796908152 AG A no 9258051
chr6 110864520 rs535946708 TG T
GRHL1 TFCP2
9258052
Genes possibly regulated by vista53101[chr6:110864475-110864588]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 110745890 110797844 - SLC22A16 ENSG00000004809.9 110797844 0.87 0.98 6868 33369
Expression level of Genes
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miRNAs possibly regulated by vista53101[chr6:110864475-110864588]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results