EnhancerDB
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  3. vista53106[chr6:111049772-111049981]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53106[chr6:111049772-111049981]
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Tissue distribution of vista53106
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Transcription factor that possibly regulate vista53106[chr6:111049772-111049981]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 111049773 111049788 FOXP1 JASPAR yes 70416415
chr6 111049773 111049794 IRF1 JASPAR yes 70416416
chr6 111049774 111049780 TBP TRANSFAC yes 70416417
chr6 111049774 111049789 FOXP1 JASPAR yes 70416418
chr6 111049777 111049792 STAT2 JASPAR yes 70416419
chr6 111049797 111049811 JUN JASPAR yes 70416420
chr6 111049797 111049811 STAT1 JASPAR yes 70416421
chr6 111049803 111049807 YY1 TRANSFAC yes 70416422
chr6 111049823 111049833 POU6F2 JASPAR yes 70416423
chr6 111049827 111049831 YY1 TRANSFAC yes 70416424
chr6 111049830 111049833 MYB TRANSFAC yes 70416425
chr6 111049841 111049853 NHLH1 JASPAR yes 70416426
chr6 111049841 111049854 ZBTB18 JASPAR yes 70416427
chr6 111049842 111049852 NHLH1 JASPAR yes 70416428
chr6 111049848 111049859 USF1 JASPAR yes 70416429
chr6 111049848 111049859 USF2 JASPAR yes 70416430
chr6 111049863 111049877 GLIS3 JASPAR yes 70416431
chr6 111049867 111049879 ZBTB7B JASPAR yes 70416432
chr6 111049870 111049881 NFKB1 JASPAR yes 70416433
chr6 111049871 111049884 NFKB1 JASPAR yes 70416434
chr6 111049871 111049884 NFKB2 JASPAR yes 70416435
chr6 111049872 111049883 NFKB1 JASPAR yes 70416436
chr6 111049882 111049902 ESR1 JASPAR yes 70416437
chr6 111049885 111049903 ESR2 JASPAR yes 70416438
chr6 111049886 111049903 ESR1 JASPAR yes 70416439
chr6 111049887 111049902 ESR2 JASPAR yes 70416440
chr6 111049888 111049892 ESR1 TRANSFAC yes 70416441
chr6 111049889 111049904 LEF1 JASPAR yes 70416442
chr6 111049890 111049904 TCF7L2 JASPAR yes 70416443
chr6 111049890 111049905 PRDM1 JASPAR yes 70416444
chr6 111049895 111049916 MAFG JASPAR yes 70416445
chr6 111049900 111049918 MAFF JASPAR yes 70416446
chr6 111049901 111049915 PAX6 JASPAR yes 70416447
chr6 111049901 111049916 MAFK JASPAR yes 70416448
chr6 111049902 111049913 BATF JASPAR yes 70416449
chr6 111049920 111049931 GCM1 JASPAR yes 70416450
chr6 111049948 111049968 TP63 JASPAR yes 70416451
chr6 111049949 111049967 TP53 JASPAR yes 70416452
chr6 111049949 111049967 TP63 JASPAR yes 70416453
chr6 111049949 111049967 TP73 JASPAR yes 70416454
chr6 111049950 111049965 TP53 JASPAR yes 70416455
chr6 111049951 111049966 TP53 JASPAR yes 70416456
chr6 111049953 111049964 NFE2L2 JASPAR yes 70416457
chr6 111049956 111049962 ATF1 TRANSFAC yes 70416458
chr6 111049956 111049963 XBP1 TRANSFAC yes 70416459
SNP sites on vista53106[chr6:111049772-111049981]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 111049775 rs566504823 T TAAA,TAAAA
FOXP1 IRF1 TBP
9259285
chr6 111049842 rs78444365 A T
NHLH1 ZBTB18
9259286
chr6 111049949 rs139944193 T A
TP53 TP63 TP73
9259287
chr6 111049960 rs114014093 G A,T
ATF1 NFE2L2 TP53 TP63 TP73 XBP1
9259288
Genes possibly regulated by vista53106[chr6:111049772-111049981]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 110931181 111137161 - CDK19 ENSG00000155111.10 111137161 0.76 0.99 6869 12820
Expression level of Genes
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miRNAs possibly regulated by vista53106[chr6:111049772-111049981]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results