EnhancerDB
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  3. vista53160[chr6:112170510-112170904]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53160[chr6:112170510-112170904]
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Tissue distribution of vista53160
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Transcription factor that possibly regulate vista53160[chr6:112170510-112170904]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 112170533 112170544 CDX2 JASPAR yes 70419086
chr6 112170533 112170544 CDX2 JASPAR yes 104382623
chr6 112170533 112170548 FOXP1 JASPAR yes 70419087
chr6 112170533 112170548 FOXP1 JASPAR yes 104382624
chr6 112170533 112170554 IRF1 JASPAR yes 70419088
chr6 112170533 112170554 IRF1 JASPAR yes 104382625
chr6 112170534 112170545 HOXA10 JASPAR yes 70419089
chr6 112170534 112170545 HOXA10 JASPAR yes 104382626
chr6 112170535 112170545 HOXA13 JASPAR yes 70419090
chr6 112170535 112170545 HOXA13 JASPAR yes 104382627
chr6 112170535 112170547 FOXC2 JASPAR yes 70419091
chr6 112170535 112170547 MEF2D JASPAR yes 70419092
chr6 112170535 112170547 FOXC2 JASPAR yes 104382628
chr6 112170535 112170547 MEF2D JASPAR yes 104382629
chr6 112170536 112170548 FOXI1 JASPAR yes 70419093
chr6 112170536 112170548 FOXI1 JASPAR yes 104382630
chr6 112170537 112170552 STAT2 JASPAR yes 70419094
chr6 112170537 112170552 STAT2 JASPAR yes 104382631
chr6 112170559 112170574 NR2C2 JASPAR yes 70419095
chr6 112170559 112170574 NR2C2 JASPAR yes 104382632
chr6 112170576 112170587 DMRT3 JASPAR yes 70419096
chr6 112170576 112170587 DMRT3 JASPAR yes 104382633
chr6 112170585 112170591 YY1 JASPAR yes 70419097
chr6 112170585 112170591 YY1 JASPAR yes 104382634
chr6 112170590 112170611 ZNF263 JASPAR yes 70419098
chr6 112170590 112170611 ZNF263 JASPAR yes 104382635
chr6 112170594 112170611 RXRA JASPAR yes 70419099
chr6 112170594 112170611 RXRA JASPAR yes 104382636
chr6 112170599 112170613 PLAG1 JASPAR yes 70419100
chr6 112170599 112170613 PLAG1 JASPAR yes 104382637
chr6 112170621 112170627 ETS1 JASPAR yes 70419101
chr6 112170621 112170627 ETS1 JASPAR yes 104382638
chr6 112170628 112170637 HIC2 JASPAR yes 70419102
chr6 112170628 112170637 HIC2 JASPAR yes 104382639
chr6 112170628 112170643 RUNX2 JASPAR yes 70419103
chr6 112170628 112170643 RUNX2 JASPAR yes 104382640
chr6 112170658 112170678 TP63 JASPAR yes 70419104
chr6 112170658 112170678 TP63 JASPAR yes 104382641
chr6 112170663 112170667 LFA1 TRANSFAC yes 70419105
chr6 112170663 112170667 LFA1 TRANSFAC yes 104382642
chr6 112170677 112170690 SCRT2 JASPAR yes 70419106
chr6 112170677 112170690 SCRT2 JASPAR yes 104382643
chr6 112170746 112170761 RFX5 JASPAR yes 70419107
chr6 112170746 112170761 RFX5 JASPAR yes 104382644
chr6 112170762 112170775 SMAD2 JASPAR yes 70419108
chr6 112170762 112170775 SMAD2 JASPAR yes 104382645
chr6 112170763 112170784 ZNF263 JASPAR yes 70419109
chr6 112170763 112170784 ZNF263 JASPAR yes 104382646
chr6 112170773 112170784 E2F6 JASPAR yes 70419110
chr6 112170773 112170784 E2F6 JASPAR yes 104382647
chr6 112170775 112170796 ZNF263 JASPAR yes 70419111
chr6 112170775 112170796 ZNF263 JASPAR yes 104382648
chr6 112170778 112170799 ZNF263 JASPAR yes 70419112
chr6 112170778 112170799 ZNF263 JASPAR yes 104382649
chr6 112170783 112170793 TBX21 JASPAR yes 70419113
chr6 112170783 112170793 TBX21 JASPAR yes 104382650
chr6 112170783 112170794 TBX20 JASPAR yes 70419114
chr6 112170783 112170794 TBX20 JASPAR yes 104382651
chr6 112170784 112170792 TBX15 JASPAR yes 70419115
chr6 112170784 112170792 TBX15 JASPAR yes 104382652
chr6 112170785 112170790 SP1 TRANSFAC yes 70419116
chr6 112170785 112170790 SP1 TRANSFAC yes 104382653
chr6 112170788 112170793 ETS2 TRANSFAC yes 70419117
chr6 112170788 112170793 ETS2 TRANSFAC yes 104382654
chr6 112170793 112170808 HNF4G JASPAR yes 70419118
chr6 112170793 112170808 HNF4G JASPAR yes 104382655
chr6 112170794 112170809 HNF4A JASPAR yes 70419119
chr6 112170794 112170809 HNF4A JASPAR yes 104382656
chr6 112170842 112170855 ELF3 JASPAR yes 70419120
chr6 112170842 112170855 ELF3 JASPAR yes 104382657
chr6 112170865 112170880 FOXP1 JASPAR yes 70419121
chr6 112170865 112170880 FOXP1 JASPAR yes 104382658
chr6 112170866 112170877 FOXP2 JASPAR yes 70419122
chr6 112170866 112170877 FOXP2 JASPAR yes 104382659
chr6 112170868 112170876 FOXO3 JASPAR yes 70419123
chr6 112170868 112170876 FOXO3 JASPAR yes 104382660
chr6 112170884 112170888 NFE TRANSFAC yes 70419124
chr6 112170884 112170888 NFE TRANSFAC yes 104382661
chr6 112170885 112170890 GATA2 JASPAR yes 70419125
chr6 112170885 112170890 GATA2 JASPAR yes 104382662
chr6 112170897 112170918 IRF1 JASPAR yes 70419126
chr6 112170897 112170918 IRF1 JASPAR yes 104382663
chr6 112170900 112170914 IRF7 JASPAR yes 70419127
chr6 112170900 112170914 IRF8 JASPAR yes 70419128
chr6 112170900 112170914 IRF7 JASPAR yes 104382664
chr6 112170900 112170914 IRF8 JASPAR yes 104382665
chr6 112170901 112170916 PRDM1 JASPAR yes 70419129
chr6 112170901 112170916 STAT2 JASPAR yes 70419130
chr6 112170901 112170916 PRDM1 JASPAR yes 104382666
chr6 112170901 112170916 STAT2 JASPAR yes 104382667
chr6 112170901 112170919 IRF2 JASPAR yes 70419131
chr6 112170901 112170919 IRF2 JASPAR yes 104382668
SNP sites on vista53160[chr6:112170510-112170904]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 112170569 rs576194926 AG A
NR2C2
9264944
chr6 112170686 rs9400511 A G
SCRT2
9264945
chr6 112170715 rs368443764 C G,T no 9264946
chr6 112170749 rs542148941 A G
RFX5
9264947
Genes possibly regulated by vista53160[chr6:112170510-112170904]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 111981535 112194655 - FYN ENSG00000010810.13 112194655 0.83 0.99 6877 76249
Expression level of Genes
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miRNAs possibly regulated by vista53160[chr6:112170510-112170904]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results