EnhancerDB
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  3. vista53172[chr6:112349180-112349430]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53172[chr6:112349180-112349430]
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Tissue distribution of vista53172
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Transcription factor that possibly regulate vista53172[chr6:112349180-112349430]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 112349203 112349462 RUNX3 UCSC Txn Factor no Conserved 108541350
chr6 112349161 112349181 RREB1 JASPAR yes 70419767
chr6 112349161 112349181 RREB1 JASPAR yes 104398668
chr6 112349180 112349193 SMAD2 JASPAR yes 70419768
chr6 112349180 112349193 SMAD2 JASPAR yes 104398671
chr6 112349185 112349195 MAX JASPAR yes 70419769
chr6 112349185 112349195 MAX JASPAR yes 104398672
chr6 112349199 112349203 YY1 TRANSFAC yes 70419770
chr6 112349199 112349203 YY1 TRANSFAC yes 104398673
chr6 112349204 112349212 FOXL1 JASPAR yes 70419771
chr6 112349204 112349212 FOXL1 JASPAR yes 104398674
chr6 112349204 112349216 TAL1 JASPAR yes 70419772
chr6 112349204 112349216 TAL1 JASPAR yes 104398675
chr6 112349205 112349217 BHLHE23 JASPAR yes 70419773
chr6 112349205 112349217 BHLHE23 JASPAR yes 104398676
chr6 112349206 112349216 BHLHE22 JASPAR yes 70419774
chr6 112349206 112349216 NEUROD2 JASPAR yes 70419775
chr6 112349206 112349216 OLIG1 JASPAR yes 70419776
chr6 112349206 112349216 OLIG2 JASPAR yes 70419777
chr6 112349206 112349216 OLIG3 JASPAR yes 70419778
chr6 112349206 112349216 BHLHE22 JASPAR yes 104398677
chr6 112349206 112349216 NEUROD2 JASPAR yes 104398678
chr6 112349206 112349216 OLIG1 JASPAR yes 104398679
chr6 112349206 112349216 OLIG2 JASPAR yes 104398680
chr6 112349206 112349216 OLIG3 JASPAR yes 104398681
chr6 112349206 112349218 TAL1 JASPAR yes 70419779
chr6 112349206 112349218 TAL1 JASPAR yes 104398682
chr6 112349221 112349233 TAL1 JASPAR yes 70419780
chr6 112349221 112349233 TAL1 JASPAR yes 104398683
chr6 112349221 112349234 ZBTB18 JASPAR yes 70419781
chr6 112349221 112349234 ZBTB18 JASPAR yes 104398684
chr6 112349222 112349232 MAX JASPAR yes 70419782
chr6 112349222 112349232 MAX JASPAR yes 104398685
chr6 112349234 112349239 ATF1 TRANSFAC yes 70419783
chr6 112349234 112349239 ATF1 TRANSFAC yes 104398686
chr6 112349250 112349265 TP53 JASPAR yes 70419784
chr6 112349250 112349265 TP53 JASPAR yes 104398687
chr6 112349277 112349292 AR JASPAR yes 70419785
chr6 112349277 112349292 AR JASPAR yes 104398688
chr6 112349280 112349300 TP63 JASPAR yes 70419786
chr6 112349280 112349300 TP63 JASPAR yes 104398689
chr6 112349285 112349297 YY1 JASPAR yes 70419787
chr6 112349285 112349297 YY1 JASPAR yes 104398690
chr6 112349297 112349311 PLAG1 JASPAR yes 70419788
chr6 112349297 112349311 PLAG1 JASPAR yes 104398691
chr6 112349330 112349334 NFE TRANSFAC yes 70419789
chr6 112349330 112349334 NFE TRANSFAC yes 104398692
chr6 112349335 112349338 MYB TRANSFAC yes 70419790
chr6 112349335 112349338 MYB TRANSFAC yes 104398693
chr6 112349338 112349349 FLI1 JASPAR yes 70419791
chr6 112349338 112349349 FLI1 JASPAR yes 104398694
chr6 112349339 112349349 ERF JASPAR yes 70419792
chr6 112349339 112349349 ERG JASPAR yes 70419793
chr6 112349339 112349349 ETS1 JASPAR yes 70419794
chr6 112349339 112349349 ERF JASPAR yes 104398695
chr6 112349339 112349349 ERG JASPAR yes 104398696
chr6 112349339 112349349 ETS1 JASPAR yes 104398697
chr6 112349339 112349350 ETV2 JASPAR yes 70419795
chr6 112349339 112349350 SPDEF JASPAR yes 70419796
chr6 112349339 112349350 ETV2 JASPAR yes 104398698
chr6 112349339 112349350 SPDEF JASPAR yes 104398699
chr6 112349339 112349353 ZIC1 JASPAR yes 70419797
chr6 112349339 112349353 ZIC1 JASPAR yes 104398700
chr6 112349339 112349354 ZIC3 JASPAR yes 70419798
chr6 112349339 112349354 ZIC3 JASPAR yes 104398701
chr6 112349389 112349392 MYB TRANSFAC yes 70419799
chr6 112349389 112349392 MYB TRANSFAC yes 104398702
chr6 112349404 112349412 NR4A2 JASPAR yes 70419800
chr6 112349404 112349412 NR4A2 JASPAR yes 104398703
chr6 112349418 112349431 HSF1 JASPAR yes 70419801
chr6 112349418 112349431 HSF2 JASPAR yes 70419802
chr6 112349418 112349431 HSF1 JASPAR yes 104398704
chr6 112349418 112349431 HSF2 JASPAR yes 104398705
chr6 112349426 112349430 TEAD2 TRANSFAC yes 70419803
chr6 112349426 112349430 TEAD2 TRANSFAC yes 104398706
chr6 112349426 112349436 MNX1 JASPAR yes 70419804
chr6 112349426 112349436 MNX1 JASPAR yes 104398707
SNP sites on vista53172[chr6:112349180-112349430]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 112349264 rs141578474 T C
RUNX3 TP53
9266383
chr6 112349302 rs587642667 A G
PLAG1 RUNX3
9266384
Genes possibly regulated by vista53172[chr6:112349180-112349430]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 112375275 112392171 + WISP3 ENSG00000112761.14 112375275 0.93 1.0 6878 74155
chr6 112391980 112408732 - TUBE1 ENSG00000074935.9 112408732 0.66 1.0 6879 40698
chr6 112408802 112423993 + FAM229B ENSG00000203778.3 112408802 0.79 0.99 6880 40628
Expression level of Genes
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miRNAs possibly regulated by vista53172[chr6:112349180-112349430]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results