EnhancerDB
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  3. vista53176[chr6:112364338-112364486]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53176[chr6:112364338-112364486]
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Tissue distribution of vista53176
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Transcription factor that possibly regulate vista53176[chr6:112364338-112364486]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 112364198 112364616 CTCF UCSC Txn Factor no Conserved 108541351
chr6 112364249 112364515 RAD21 UCSC Txn Factor no Conserved 108541352
chr6 112364249 112364563 SMC3 UCSC Txn Factor no Conserved 108541353
chr6 112364331 112364343 FOXI1 JASPAR yes 70419954
chr6 112364331 112364343 FOXI1 JASPAR yes 104400840
chr6 112364332 112364344 FOXC2 JASPAR yes 70419955
chr6 112364332 112364344 FOXC2 JASPAR yes 104400841
chr6 112364333 112364344 FOXC1 JASPAR yes 70419956
chr6 112364333 112364344 FOXC1 JASPAR yes 104400842
chr6 112364334 112364345 FOXA1 JASPAR yes 70419957
chr6 112364334 112364345 FOXA1 JASPAR yes 104400843
chr6 112364370 112364384 ZIC1 JASPAR yes 70419958
chr6 112364370 112364384 ZIC1 JASPAR yes 104400844
chr6 112364370 112364385 ZIC4 JASPAR yes 70419959
chr6 112364370 112364385 ZIC4 JASPAR yes 104400845
chr6 112364381 112364400 CTCF JASPAR yes 70419960
chr6 112364381 112364400 CTCF JASPAR yes 104400846
chr6 112364395 112364407 TFAP2A JASPAR yes 70419961
chr6 112364395 112364407 TFAP2A JASPAR yes 104400847
chr6 112364395 112364410 TFAP2A JASPAR yes 70419962
chr6 112364395 112364410 TFAP2A JASPAR yes 104400848
chr6 112364396 112364405 TFAP2A JASPAR yes 70419963
chr6 112364396 112364405 TFAP2A JASPAR yes 104400849
chr6 112364403 112364408 ETS2 TRANSFAC yes 70419964
chr6 112364403 112364408 ETS2 TRANSFAC yes 104400850
chr6 112364408 112364422 PLAG1 JASPAR yes 70419965
chr6 112364408 112364422 PLAG1 JASPAR yes 104400851
chr6 112364436 112364446 SP1 JASPAR yes 70419966
chr6 112364436 112364446 SP1 JASPAR yes 104400852
chr6 112364484 112364498 STAT1 JASPAR yes 70419967
chr6 112364484 112364498 STAT1 JASPAR yes 104400853
SNP sites on vista53176[chr6:112364338-112364486]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 112364361 rs9384817 G A
CTCF RAD21 SMC3
9266589
chr6 112364364 rs587619818 C T
CTCF RAD21 SMC3
9266590
chr6 112364434 rs6907981 G T
CTCF RAD21 SMC3
9266591
Genes possibly regulated by vista53176[chr6:112364338-112364486]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 112375275 112392171 + WISP3 ENSG00000112761.14 112375275 0.93 1.0 6878 89211
chr6 112391980 112408732 - TUBE1 ENSG00000074935.9 112408732 0.66 1.0 6879 55754
chr6 112408802 112423993 + FAM229B ENSG00000203778.3 112408802 0.79 0.99 6880 55684
Expression level of Genes
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miRNAs possibly regulated by vista53176[chr6:112364338-112364486]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results