EnhancerDB
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  3. vista53178[chr6:112449250-112449618]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53178[chr6:112449250-112449618]
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Tissue distribution of vista53178
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Transcription factor that possibly regulate vista53178[chr6:112449250-112449618]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 112449280 112449294 POU1F1 JASPAR yes 70419970
chr6 112449281 112449293 POU3F1 JASPAR yes 70419971
chr6 112449281 112449293 POU3F2 JASPAR yes 70419972
chr6 112449281 112449294 POU3F3 JASPAR yes 70419973
chr6 112449282 112449292 NFATC3 JASPAR yes 70419974
chr6 112449282 112449294 POU2F1 JASPAR yes 70419975
chr6 112449302 112449317 SOX21 JASPAR yes 70419976
chr6 112449302 112449318 SOX4 JASPAR yes 70419977
chr6 112449313 112449325 HLF JASPAR yes 70419978
chr6 112449322 112449337 IRF9 JASPAR yes 70419979
chr6 112449354 112449370 SOX8 JASPAR yes 70419980
chr6 112449357 112449373 POU4F3 JASPAR yes 70419981
chr6 112449359 112449367 FOXL1 JASPAR yes 70419982
chr6 112449359 112449373 POU4F1 JASPAR yes 70419983
chr6 112449360 112449374 POU4F1 JASPAR yes 70419984
chr6 112449360 112449376 POU4F3 JASPAR yes 70419985
chr6 112449363 112449377 POU4F1 JASPAR yes 70419986
chr6 112449364 112449376 FOXC2 JASPAR yes 70419987
chr6 112449365 112449376 FOXB1 JASPAR yes 70419988
chr6 112449365 112449376 FOXC1 JASPAR yes 70419989
chr6 112449366 112449370 YY1 TRANSFAC yes 70419990
chr6 112449394 112449398 YY1 TRANSFAC yes 70419991
chr6 112449410 112449415 ETS2 TRANSFAC yes 70419992
chr6 112449439 112449457 MAFF JASPAR yes 70419993
chr6 112449441 112449456 MAFK JASPAR yes 70419994
chr6 112449442 112449456 JUN JASPAR yes 70419995
chr6 112449454 112449472 NFYA JASPAR yes 70419996
chr6 112449474 112449487 ATF4 JASPAR yes 70419997
chr6 112449503 112449518 AR JASPAR yes 70419998
chr6 112449503 112449520 NR3C2 JASPAR yes 70419999
chr6 112449503 112449521 RARA JASPAR yes 70420000
chr6 112449505 112449522 ZNF410 JASPAR yes 70420001
chr6 112449508 112449512 YY1 TRANSFAC yes 70420002
chr6 112449509 112449521 POU2F1 JASPAR yes 70420003
chr6 112449531 112449546 AR JASPAR yes 70420004
chr6 112449551 112449565 GATA2 JASPAR yes 70420005
chr6 112449561 112449571 NKX2-3 JASPAR yes 70420006
chr6 112449562 112449571 NKX3-2 JASPAR yes 70420007
chr6 112449599 112449614 RUNX2 JASPAR yes 70420008
chr6 112449602 112449613 RUNX1 JASPAR yes 70420009
chr6 112449603 112449613 RUNX3 JASPAR yes 70420010
chr6 112449604 112449613 RUNX2 JASPAR yes 70420011
SNP sites on vista53178[chr6:112449250-112449618]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 112449345 rs558632864 TA T no 9266664
chr6 112449427 rs77886563 G T no 9266665
chr6 112449481 rs147532237 T C
ATF4
9266666
Genes possibly regulated by vista53178[chr6:112449250-112449618]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 112375275 112392171 + WISP3 ENSG00000112761.14 112375275 0.93 1.0 6878 26025
chr6 112391980 112408732 - TUBE1 ENSG00000074935.9 112408732 0.66 1.0 6879 59482
chr6 112408802 112423993 + FAM229B ENSG00000203778.3 112408802 0.79 0.99 6880 59552
Expression level of Genes
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miRNAs possibly regulated by vista53178[chr6:112449250-112449618]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results