EnhancerDB
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  3. vista53186[chr6:112552727-112553228]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53186[chr6:112552727-112553228]
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Tissue distribution of vista53186
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Transcription factor that possibly regulate vista53186[chr6:112552727-112553228]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 112552735 112552745 EVX2 JASPAR yes 70420260
chr6 112552735 112552745 GSX1 JASPAR yes 70420261
chr6 112552735 112552745 HOXA2 JASPAR yes 70420262
chr6 112552735 112552745 NOTO JASPAR yes 70420263
chr6 112552735 112552745 EVX2 JASPAR yes 104405179
chr6 112552735 112552745 GSX1 JASPAR yes 104405180
chr6 112552735 112552745 HOXA2 JASPAR yes 104405181
chr6 112552735 112552745 NOTO JASPAR yes 104405182
chr6 112552736 112552750 POU1F1 JASPAR yes 70420264
chr6 112552736 112552750 POU1F1 JASPAR yes 104405183
chr6 112552738 112552742 YY1 TRANSFAC yes 70420265
chr6 112552738 112552742 YY1 TRANSFAC yes 104405184
chr6 112552750 112552761 RUNX1 JASPAR yes 70420266
chr6 112552750 112552761 RUNX1 JASPAR yes 104405185
chr6 112552777 112552790 ZBTB18 JASPAR yes 70420267
chr6 112552777 112552790 ZBTB18 JASPAR yes 104405186
chr6 112552787 112552792 GATA2 JASPAR yes 70420268
chr6 112552787 112552792 GATA2 JASPAR yes 104405187
chr6 112552793 112552801 TBX15 JASPAR yes 70420269
chr6 112552793 112552801 TBX1 JASPAR yes 70420270
chr6 112552793 112552801 TBX4 JASPAR yes 70420271
chr6 112552793 112552801 TBX5 JASPAR yes 70420272
chr6 112552793 112552801 TBX15 JASPAR yes 104405188
chr6 112552793 112552801 TBX1 JASPAR yes 104405189
chr6 112552793 112552801 TBX4 JASPAR yes 104405190
chr6 112552793 112552801 TBX5 JASPAR yes 104405191
chr6 112552802 112552808 LEF1 TRANSFAC yes 70420273
chr6 112552802 112552808 SOX10 JASPAR yes 70420274
chr6 112552802 112552808 LEF1 TRANSFAC yes 104405192
chr6 112552802 112552808 SOX10 JASPAR yes 104405193
chr6 112552810 112552814 YY1 TRANSFAC yes 70420275
chr6 112552810 112552814 YY1 TRANSFAC yes 104405194
chr6 112552836 112552843 NFATC2 JASPAR yes 70420276
chr6 112552836 112552843 NFATC2 JASPAR yes 104405195
chr6 112552851 112552857 SOX10 JASPAR yes 70420277
chr6 112552851 112552857 SOX10 JASPAR yes 104405196
chr6 112552864 112552875 GCM1 JASPAR yes 70420278
chr6 112552864 112552875 GCM1 JASPAR yes 104405197
chr6 112552875 112552888 ZBTB18 JASPAR yes 70420279
chr6 112552875 112552888 ZBTB18 JASPAR yes 104405198
chr6 112552877 112552886 SNAI2 JASPAR yes 70420280
chr6 112552877 112552886 SNAI2 JASPAR yes 104405199
chr6 112552877 112552887 FIGLA JASPAR yes 70420281
chr6 112552877 112552887 ID4 JASPAR yes 70420282
chr6 112552877 112552887 TCF3 JASPAR yes 70420283
chr6 112552877 112552887 TCF4 JASPAR yes 70420284
chr6 112552877 112552887 FIGLA JASPAR yes 104405200
chr6 112552877 112552887 ID4 JASPAR yes 104405201
chr6 112552877 112552887 TCF3 JASPAR yes 104405202
chr6 112552877 112552887 TCF4 JASPAR yes 104405203
chr6 112552892 112552903 FOS JASPAR yes 70420285
chr6 112552892 112552903 JUND JASPAR yes 70420286
chr6 112552892 112552903 FOS JASPAR yes 104405204
chr6 112552892 112552903 JUND JASPAR yes 104405205
chr6 112552894 112552900 JUN TRANSFAC yes 70420287
chr6 112552894 112552900 JUN TRANSFAC yes 104405206
chr6 112552901 112552914 ZBTB18 JASPAR yes 70420288
chr6 112552901 112552914 ZBTB18 JASPAR yes 104405207
chr6 112552903 112552913 NEUROG2 JASPAR yes 70420289
chr6 112552903 112552913 NEUROG2 JASPAR yes 104405208
chr6 112552922 112552936 CREB3L1 JASPAR yes 70420290
chr6 112552922 112552936 CREB3L1 JASPAR yes 104405209
chr6 112552927 112552945 ESR2 JASPAR yes 70420291
chr6 112552927 112552945 ESR2 JASPAR yes 104405210
chr6 112552928 112552945 ESR1 JASPAR yes 70420292
chr6 112552928 112552945 ESR1 JASPAR yes 104405211
chr6 112552928 112552946 ESR2 JASPAR yes 70420293
chr6 112552928 112552946 ESR2 JASPAR yes 104405212
chr6 112552930 112552944 TLX1 JASPAR yes 70420294
chr6 112552930 112552944 TLX1 JASPAR yes 104405213
chr6 112552938 112552950 BHLHE23 JASPAR yes 70420295
chr6 112552938 112552950 PKNOX1 JASPAR yes 70420296
chr6 112552938 112552950 PKNOX2 JASPAR yes 70420297
chr6 112552938 112552950 TGIF1 JASPAR yes 70420298
chr6 112552938 112552950 TGIF2 JASPAR yes 70420299
chr6 112552938 112552950 BHLHE23 JASPAR yes 104405214
chr6 112552938 112552950 PKNOX1 JASPAR yes 104405215
chr6 112552938 112552950 PKNOX2 JASPAR yes 104405216
chr6 112552938 112552950 TGIF1 JASPAR yes 104405217
chr6 112552938 112552950 TGIF2 JASPAR yes 104405218
chr6 112552939 112552949 BHLHE22 JASPAR yes 70420300
chr6 112552939 112552949 NEUROD2 JASPAR yes 70420301
chr6 112552939 112552949 NEUROG2 JASPAR yes 70420302
chr6 112552939 112552949 OLIG1 JASPAR yes 70420303
chr6 112552939 112552949 OLIG2 JASPAR yes 70420304
chr6 112552939 112552949 OLIG3 JASPAR yes 70420305
chr6 112552939 112552949 BHLHE22 JASPAR yes 104405219
chr6 112552939 112552949 NEUROD2 JASPAR yes 104405220
chr6 112552939 112552949 NEUROG2 JASPAR yes 104405221
chr6 112552939 112552949 OLIG1 JASPAR yes 104405222
chr6 112552939 112552949 OLIG2 JASPAR yes 104405223
chr6 112552939 112552949 OLIG3 JASPAR yes 104405224
chr6 112552944 112552957 SMAD2 JASPAR yes 70420306
chr6 112552944 112552957 SMAD2 JASPAR yes 104405225
chr6 112552959 112552962 MYB TRANSFAC yes 70420307
chr6 112552959 112552962 MYB TRANSFAC yes 104405226
chr6 112552976 112552986 HOXB13 JASPAR yes 70420308
chr6 112552976 112552986 HOXB13 JASPAR yes 104405227
chr6 112552987 112552998 CDX2 JASPAR yes 70420309
chr6 112552987 112552998 CDX2 JASPAR yes 104405228
chr6 112552988 112552998 MNX1 JASPAR yes 70420310
chr6 112552988 112552998 MNX1 JASPAR yes 104405229
chr6 112552988 112552999 HOXA10 JASPAR yes 70420311
chr6 112552988 112552999 HOXA10 JASPAR yes 104405230
chr6 112552989 112552998 CDX1 JASPAR yes 70420312
chr6 112552989 112552998 CDX1 JASPAR yes 104405231
chr6 112552989 112552999 HOXA13 JASPAR yes 70420313
chr6 112552989 112552999 HOXB13 JASPAR yes 70420314
chr6 112552989 112552999 HOXD13 JASPAR yes 70420315
chr6 112552989 112552999 HOXA13 JASPAR yes 104405232
chr6 112552989 112552999 HOXB13 JASPAR yes 104405233
chr6 112552989 112552999 HOXD13 JASPAR yes 104405234
chr6 112553002 112553017 SOX21 JASPAR yes 70420316
chr6 112553002 112553017 SOX21 JASPAR yes 104405235
chr6 112553027 112553039 IRF1 JASPAR yes 70420317
chr6 112553027 112553039 IRF1 JASPAR yes 104405236
chr6 112553047 112553066 REST JASPAR yes 70420318
chr6 112553047 112553066 REST JASPAR yes 104405237
chr6 112553055 112553060 ETS2 TRANSFAC yes 70420319
chr6 112553055 112553060 ETS2 TRANSFAC yes 104405238
chr6 112553055 112553063 EHF JASPAR yes 70420320
chr6 112553055 112553063 EHF JASPAR yes 104405239
chr6 112553066 112553080 GLIS3 JASPAR yes 70420321
chr6 112553066 112553080 GLIS3 JASPAR yes 104405240
chr6 112553084 112553087 MYB TRANSFAC yes 70420322
chr6 112553084 112553087 MYB TRANSFAC yes 104405241
chr6 112553125 112553129 NFE TRANSFAC yes 70420323
chr6 112553125 112553129 NFE TRANSFAC yes 104405242
chr6 112553127 112553137 TFE3 JASPAR yes 70420324
chr6 112553127 112553137 TFEB JASPAR yes 70420325
chr6 112553127 112553137 TFEC JASPAR yes 70420326
chr6 112553127 112553137 TFE3 JASPAR yes 104405243
chr6 112553127 112553137 TFEB JASPAR yes 104405244
chr6 112553127 112553137 TFEC JASPAR yes 104405245
chr6 112553134 112553144 HOXA13 JASPAR yes 70420327
chr6 112553134 112553144 HOXB13 JASPAR yes 70420328
chr6 112553134 112553144 HOXC10 JASPAR yes 70420329
chr6 112553134 112553144 HOXD11 JASPAR yes 70420330
chr6 112553134 112553144 HOXD13 JASPAR yes 70420331
chr6 112553134 112553144 HOXA13 JASPAR yes 104405246
chr6 112553134 112553144 HOXB13 JASPAR yes 104405247
chr6 112553134 112553144 HOXC10 JASPAR yes 104405248
chr6 112553134 112553144 HOXD11 JASPAR yes 104405249
chr6 112553134 112553144 HOXD13 JASPAR yes 104405250
chr6 112553134 112553145 HOXA10 JASPAR yes 70420332
chr6 112553134 112553145 HOXC11 JASPAR yes 70420333
chr6 112553134 112553145 HOXC12 JASPAR yes 70420334
chr6 112553134 112553145 HOXC13 JASPAR yes 70420335
chr6 112553134 112553145 HOXD12 JASPAR yes 70420336
chr6 112553134 112553145 HOXA10 JASPAR yes 104405251
chr6 112553134 112553145 HOXC11 JASPAR yes 104405252
chr6 112553134 112553145 HOXC12 JASPAR yes 104405253
chr6 112553134 112553145 HOXC13 JASPAR yes 104405254
chr6 112553134 112553145 HOXD12 JASPAR yes 104405255
chr6 112553135 112553144 CDX1 JASPAR yes 70420337
chr6 112553135 112553144 CDX1 JASPAR yes 104405256
chr6 112553135 112553146 CDX2 JASPAR yes 70420338
chr6 112553135 112553146 CDX2 JASPAR yes 104405257
chr6 112553136 112553147 BATF JASPAR yes 70420339
chr6 112553136 112553147 BATF JASPAR yes 104405258
chr6 112553138 112553149 FOS JASPAR yes 70420340
chr6 112553138 112553149 FOSL1 JASPAR yes 70420341
chr6 112553138 112553149 FOS JASPAR yes 104405259
chr6 112553138 112553149 FOSL1 JASPAR yes 104405260
chr6 112553139 112553148 JDP2 JASPAR yes 70420342
chr6 112553139 112553148 JDP2 JASPAR yes 104405261
chr6 112553140 112553151 BATF JASPAR yes 70420343
chr6 112553140 112553151 BATF JASPAR yes 104405262
chr6 112553148 112553158 HOXA13 JASPAR yes 70420344
chr6 112553148 112553158 HOXB13 JASPAR yes 70420345
chr6 112553148 112553158 HOXC10 JASPAR yes 70420346
chr6 112553148 112553158 HOXD11 JASPAR yes 70420347
chr6 112553148 112553158 HOXD13 JASPAR yes 70420348
chr6 112553148 112553158 HOXA13 JASPAR yes 104405263
chr6 112553148 112553158 HOXB13 JASPAR yes 104405264
chr6 112553148 112553158 HOXC10 JASPAR yes 104405265
chr6 112553148 112553158 HOXD11 JASPAR yes 104405266
chr6 112553148 112553158 HOXD13 JASPAR yes 104405267
chr6 112553148 112553159 HOXC11 JASPAR yes 70420349
chr6 112553148 112553159 HOXC13 JASPAR yes 70420350
chr6 112553148 112553159 HOXC11 JASPAR yes 104405268
chr6 112553148 112553159 HOXC13 JASPAR yes 104405269
chr6 112553149 112553158 CDX1 JASPAR yes 70420351
chr6 112553149 112553158 CDX1 JASPAR yes 104405270
chr6 112553149 112553160 CDX2 JASPAR yes 70420352
chr6 112553149 112553160 CDX2 JASPAR yes 104405271
chr6 112553159 112553173 POU1F1 JASPAR yes 70420353
chr6 112553159 112553173 POU1F1 JASPAR yes 104405272
chr6 112553160 112553172 POU3F2 JASPAR yes 70420354
chr6 112553160 112553172 POU3F2 JASPAR yes 104405273
chr6 112553162 112553176 IRF8 JASPAR yes 70420355
chr6 112553162 112553176 IRF8 JASPAR yes 104405274
chr6 112553163 112553181 IRF2 JASPAR yes 70420356
chr6 112553163 112553181 IRF2 JASPAR yes 104405275
chr6 112553166 112553177 PROP1 JASPAR yes 70420357
chr6 112553166 112553177 PROP1 JASPAR yes 104405276
chr6 112553192 112553196 YY1 TRANSFAC yes 70420358
chr6 112553192 112553196 YY1 TRANSFAC yes 104405277
chr6 112553219 112553223 YY1 TRANSFAC yes 70420359
chr6 112553219 112553223 YY1 TRANSFAC yes 104405278
SNP sites on vista53186[chr6:112552727-112553228]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 112553054 rs150802907 C T
REST
9267046
chr6 112553177 rs139219551 C A,T
IRF2 PROP1
9267047
chr6 112553178 rs112108676 G A
IRF2
9267048
chr6 112553200 rs186455960 A G no 9267049
Genes possibly regulated by vista53186[chr6:112552727-112553228]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 112429963 112576141 - LAMA4 ENSG00000112769.14 112576141 0.83 0.99 6881 77087
Expression level of Genes
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miRNAs possibly regulated by vista53186[chr6:112552727-112553228]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results