EnhancerDB
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  3. vista53187[chr6:112555272-112555453]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53187[chr6:112555272-112555453]
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Tissue distribution of vista53187
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Transcription factor that possibly regulate vista53187[chr6:112555272-112555453]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 112555261 112555272 USF2 JASPAR yes 70420360
chr6 112555261 112555272 USF2 JASPAR yes 104405583
chr6 112555312 112555316 TEAD2 TRANSFAC yes 70420361
chr6 112555312 112555316 TEAD2 TRANSFAC yes 104405584
chr6 112555314 112555317 MYB TRANSFAC yes 70420362
chr6 112555314 112555317 MYB TRANSFAC yes 104405585
chr6 112555319 112555327 FOXL1 JASPAR yes 70420363
chr6 112555319 112555327 FOXL1 JASPAR yes 104405586
chr6 112555333 112555338 ATF1 TRANSFAC yes 70420364
chr6 112555333 112555338 ATF1 TRANSFAC yes 104405587
chr6 112555341 112555356 FOXP1 JASPAR yes 70420365
chr6 112555341 112555356 FOXP1 JASPAR yes 104405588
chr6 112555343 112555353 HOXA13 JASPAR yes 70420366
chr6 112555343 112555353 HOXA13 JASPAR yes 104405589
chr6 112555343 112555358 FOXP1 JASPAR yes 70420367
chr6 112555343 112555358 FOXP1 JASPAR yes 104405590
chr6 112555345 112555349 TEAD2 TRANSFAC yes 70420368
chr6 112555345 112555349 TEAD2 TRANSFAC yes 104405591
chr6 112555345 112555350 TBP TRANSFAC yes 70420369
chr6 112555345 112555350 TBP TRANSFAC yes 104405592
chr6 112555345 112555351 TFIID TRANSFAC yes 70420370
chr6 112555345 112555351 TFIID TRANSFAC yes 104405593
chr6 112555345 112555356 FOXC1 JASPAR yes 70420371
chr6 112555345 112555356 FOXC1 JASPAR yes 104405594
chr6 112555345 112555357 FOXC2 JASPAR yes 70420372
chr6 112555345 112555357 FOXC2 JASPAR yes 104405595
chr6 112555346 112555357 FOXP2 JASPAR yes 70420373
chr6 112555346 112555357 FOXP2 JASPAR yes 104405596
chr6 112555352 112555373 IRF1 JASPAR yes 70420374
chr6 112555352 112555373 IRF1 JASPAR yes 104405597
chr6 112555356 112555371 FOXP1 JASPAR yes 70420375
chr6 112555356 112555371 FOXP1 JASPAR yes 104405598
chr6 112555357 112555372 FOXP1 JASPAR yes 70420376
chr6 112555357 112555372 FOXP1 JASPAR yes 104405599
chr6 112555358 112555373 FOXP1 JASPAR yes 70420377
chr6 112555358 112555373 MEF2C JASPAR yes 70420378
chr6 112555358 112555373 FOXP1 JASPAR yes 104405600
chr6 112555358 112555373 MEF2C JASPAR yes 104405601
chr6 112555358 112555379 IRF1 JASPAR yes 70420379
chr6 112555358 112555379 IRF1 JASPAR yes 104405602
chr6 112555360 112555375 FOXP1 JASPAR yes 70420380
chr6 112555360 112555375 FOXP1 JASPAR yes 104405603
chr6 112555366 112555379 POU2F2 JASPAR yes 70420381
chr6 112555366 112555379 POU2F2 JASPAR yes 104405604
chr6 112555367 112555371 YY1 TRANSFAC yes 70420382
chr6 112555367 112555371 YY1 TRANSFAC yes 104405605
chr6 112555386 112555397 DUX4 JASPAR yes 70420383
chr6 112555386 112555397 DUX4 JASPAR yes 104405606
chr6 112555391 112555395 YY1 TRANSFAC yes 70420384
chr6 112555391 112555395 YY1 TRANSFAC yes 104405607
chr6 112555424 112555431 SPIB JASPAR yes 70420385
chr6 112555424 112555431 SPIB JASPAR yes 104405608
chr6 112555451 112555457 JUN TRANSFAC yes 70420386
chr6 112555451 112555457 JUN TRANSFAC yes 104405609
SNP sites on vista53187[chr6:112555272-112555453]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 112555357 rs547498684 A AT
FOXC2 FOXP1 FOXP2 IRF1
9267072
Genes possibly regulated by vista53187[chr6:112555272-112555453]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 112429963 112576141 - LAMA4 ENSG00000112769.14 112576141 0.83 0.99 6881 79312
Expression level of Genes
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miRNAs possibly regulated by vista53187[chr6:112555272-112555453]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results