EnhancerDB
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  3. vista53190[chr6:112572856-112573086]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53190[chr6:112572856-112573086]
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Tissue distribution of vista53190
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Transcription factor that possibly regulate vista53190[chr6:112572856-112573086]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 112572848 112572860 TEAD1 JASPAR yes 70420515
chr6 112572848 112572860 TEAD1 JASPAR yes 104407679
chr6 112572851 112572859 TEAD3 JASPAR yes 70420516
chr6 112572851 112572859 TEAD3 JASPAR yes 104407680
chr6 112572855 112572867 FOXI1 JASPAR yes 70420517
chr6 112572855 112572867 FOXI1 JASPAR yes 104407681
chr6 112572858 112572862 YY1 TRANSFAC yes 70420518
chr6 112572858 112572862 YY1 TRANSFAC yes 104407682
chr6 112572883 112572893 MEF2A JASPAR yes 70420519
chr6 112572883 112572893 MEF2A JASPAR yes 104407683
chr6 112572884 112572888 TEAD2 TRANSFAC yes 70420520
chr6 112572884 112572888 TEAD2 TRANSFAC yes 104407684
chr6 112572884 112572889 TBP TRANSFAC yes 70420521
chr6 112572884 112572889 TBP TRANSFAC yes 104407685
chr6 112572908 112572913 SP1 TRANSFAC yes 70420522
chr6 112572908 112572913 SP1 TRANSFAC yes 104407686
chr6 112572917 112572936 RFX2 JASPAR yes 70420523
chr6 112572917 112572936 RFX2 JASPAR yes 104407687
chr6 112572921 112572932 YY2 JASPAR yes 70420524
chr6 112572921 112572932 YY2 JASPAR yes 104407688
chr6 112572942 112572945 MYB TRANSFAC yes 70420525
chr6 112572942 112572945 MYB TRANSFAC yes 104407689
chr6 112572947 112572963 ZNF143 JASPAR yes 70420526
chr6 112572947 112572963 ZNF143 JASPAR yes 104407690
chr6 112572952 112572956 YY1 TRANSFAC yes 70420527
chr6 112572952 112572956 YY1 TRANSFAC yes 104407691
chr6 112572978 112572988 EMX1 JASPAR yes 70420528
chr6 112572978 112572988 EVX1 JASPAR yes 70420529
chr6 112572978 112572988 EVX2 JASPAR yes 70420530
chr6 112572978 112572988 HOXA2 JASPAR yes 70420531
chr6 112572978 112572988 MEOX1 JASPAR yes 70420532
chr6 112572978 112572988 MEOX2 JASPAR yes 70420533
chr6 112572979 112572989 POU6F2 JASPAR yes 70420534
chr6 112572983 112572990 JUN TRANSFAC yes 70420535
chr6 112572983 112573000 RXRA JASPAR yes 70420536
chr6 112573010 112573025 HNF4A JASPAR yes 70420537
chr6 112573011 112573025 RXRB JASPAR yes 70420538
chr6 112573011 112573025 RXRG JASPAR yes 70420539
chr6 112573011 112573026 HNF4G JASPAR yes 70420540
chr6 112573011 112573026 LEF1 JASPAR yes 70420541
chr6 112573016 112573027 ESRRB JASPAR yes 70420542
chr6 112573017 112573025 NR4A2 JASPAR yes 70420543
chr6 112573020 112573035 STAT1 JASPAR yes 70420544
chr6 112573021 112573029 EHF JASPAR yes 70420545
chr6 112573022 112573033 STAT1 JASPAR yes 70420546
chr6 112573022 112573033 STAT3 JASPAR yes 70420547
chr6 112573026 112573040 JUN JASPAR yes 70420548
chr6 112573028 112573039 BATF JASPAR yes 70420549
chr6 112573029 112573040 FOSL2 JASPAR yes 70420550
chr6 112573029 112573040 JUNB JASPAR yes 70420551
chr6 112573030 112573041 FOS JASPAR yes 70420552
chr6 112573030 112573041 FOSL1 JASPAR yes 70420553
chr6 112573030 112573041 JUND JASPAR yes 70420554
chr6 112573031 112573040 JDP2 JASPAR yes 70420555
chr6 112573032 112573043 BATF JASPAR yes 70420556
chr6 112573040 112573061 IRF1 JASPAR yes 70420557
chr6 112573042 112573057 STAT2 JASPAR yes 70420558
chr6 112573043 112573057 SPIC JASPAR yes 70420559
chr6 112573043 112573057 STAT1 JASPAR yes 70420560
SNP sites on vista53190[chr6:112572856-112573086]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 112572887 rs190716881 T A
MEF2A TBP TEAD2
9267225
chr6 112572912 rs142562639 G A
SP1
9267226
Genes possibly regulated by vista53190[chr6:112572856-112573086]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 112429963 112576141 - LAMA4 ENSG00000112769.14 112576141 0.83 0.99 6881 96945
chr6 112668532 112672498 + RFPL4B ENSG00000251258.1 112668532 0.96 1.0 6882 4554
Expression level of Genes
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miRNAs possibly regulated by vista53190[chr6:112572856-112573086]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results