EnhancerDB
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  3. vista53192[chr6:112617826-112618166]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53192[chr6:112617826-112618166]
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Tissue distribution of vista53192
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Transcription factor that possibly regulate vista53192[chr6:112617826-112618166]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 112617892 112617896 TEAD2 TRANSFAC yes 70420566
chr6 112617892 112617896 TEAD2 TRANSFAC yes 104410627
chr6 112617892 112617897 TBP TRANSFAC yes 70420567
chr6 112617892 112617897 TBP TRANSFAC yes 104410628
chr6 112617892 112617898 TMF TRANSFAC yes 70420568
chr6 112617892 112617898 TMF TRANSFAC yes 104410629
chr6 112617911 112617923 POU2F1 JASPAR yes 70420569
chr6 112617911 112617923 POU2F1 JASPAR yes 104410630
chr6 112617911 112617925 POU1F1 JASPAR yes 70420570
chr6 112617911 112617925 POU1F1 JASPAR yes 104410631
chr6 112617912 112617925 POU2F2 JASPAR yes 70420571
chr6 112617912 112617925 POU2F2 JASPAR yes 104410632
chr6 112617913 112617922 POU5F1B JASPAR yes 70420572
chr6 112617913 112617922 POU5F1B JASPAR yes 104410633
chr6 112617923 112617937 NR2F1 JASPAR yes 70420573
chr6 112617923 112617937 NR2F1 JASPAR yes 104410634
chr6 112617928 112617941 NR2F1 JASPAR yes 70420574
chr6 112617928 112617941 NR2F1 JASPAR yes 104410635
chr6 112617932 112617936 ESR1 TRANSFAC yes 70420575
chr6 112617932 112617936 ESR1 TRANSFAC yes 104410636
chr6 112618014 112618017 MYB TRANSFAC yes 70420576
chr6 112618014 112618017 MYB TRANSFAC yes 104410637
chr6 112618032 112618037 ETS2 TRANSFAC yes 70420577
chr6 112618032 112618037 ETS2 TRANSFAC yes 104410638
chr6 112618039 112618054 NFYB JASPAR yes 70420578
chr6 112618039 112618054 NFYB JASPAR yes 104410639
chr6 112618041 112618054 DUXA JASPAR yes 70420579
chr6 112618041 112618054 DUXA JASPAR yes 104410640
chr6 112618041 112618057 NFYA JASPAR yes 70420580
chr6 112618041 112618057 NFYA JASPAR yes 104410641
chr6 112618043 112618055 PBX1 JASPAR yes 70420581
chr6 112618043 112618055 PBX1 JASPAR yes 104410642
chr6 112618046 112618050 H1TF2 TRANSFAC yes 70420582
chr6 112618046 112618050 NFE TRANSFAC yes 70420583
chr6 112618046 112618050 SRF TRANSFAC yes 70420584
chr6 112618046 112618050 H1TF2 TRANSFAC yes 104410643
chr6 112618046 112618050 NFE TRANSFAC yes 104410644
chr6 112618046 112618050 SRF TRANSFAC yes 104410645
chr6 112618085 112618090 ETS2 TRANSFAC yes 70420585
chr6 112618085 112618090 ETS2 TRANSFAC yes 104410646
chr6 112618087 112618097 RELA JASPAR yes 70420586
chr6 112618087 112618097 RELA JASPAR yes 104410647
chr6 112618092 112618104 TEAD1 JASPAR yes 70420587
chr6 112618092 112618104 TEAD1 JASPAR yes 104410648
chr6 112618098 112618117 RFX2 JASPAR yes 70420588
chr6 112618098 112618117 RFX2 JASPAR yes 104410649
chr6 112618102 112618118 RFX2 JASPAR yes 70420589
chr6 112618102 112618118 RFX3 JASPAR yes 70420590
chr6 112618102 112618118 RFX4 JASPAR yes 70420591
chr6 112618102 112618118 RFX5 JASPAR yes 70420592
chr6 112618102 112618118 RFX2 JASPAR yes 104410650
chr6 112618102 112618118 RFX3 JASPAR yes 104410651
chr6 112618102 112618118 RFX4 JASPAR yes 104410652
chr6 112618102 112618118 RFX5 JASPAR yes 104410653
chr6 112618103 112618122 RFX2 JASPAR yes 70420593
chr6 112618103 112618122 RFX2 JASPAR yes 104410654
chr6 112618112 112618127 RUNX2 JASPAR yes 70420594
chr6 112618112 112618127 RUNX2 JASPAR yes 104410655
chr6 112618113 112618122 RUNX2 JASPAR yes 70420595
chr6 112618113 112618122 RUNX2 JASPAR yes 104410656
chr6 112618113 112618123 RUNX3 JASPAR yes 70420596
chr6 112618113 112618123 RUNX3 JASPAR yes 104410657
chr6 112618126 112618129 MYB TRANSFAC yes 70420597
chr6 112618126 112618129 MYB TRANSFAC yes 104410658
chr6 112618126 112618137 PROP1 JASPAR yes 70420598
chr6 112618126 112618137 PROP1 JASPAR yes 104410659
chr6 112618135 112618156 IRF1 JASPAR yes 70420599
chr6 112618135 112618156 IRF1 JASPAR yes 104410660
chr6 112618136 112618141 ETS2 TRANSFAC yes 70420600
chr6 112618136 112618141 ETS2 TRANSFAC yes 104410661
chr6 112618139 112618154 PRDM1 JASPAR yes 70420601
chr6 112618139 112618154 PRDM1 JASPAR yes 104410662
chr6 112618142 112618155 SMAD2 JASPAR yes 70420602
chr6 112618142 112618155 SMAD2 JASPAR yes 104410663
chr6 112618156 112618166 NFIA JASPAR yes 70420603
chr6 112618156 112618166 NFIA JASPAR yes 104410664
chr6 112618157 112618166 NFIX JASPAR yes 70420604
chr6 112618157 112618166 NFIX JASPAR yes 104410665
chr6 112618158 112618164 NFIC JASPAR yes 70420605
chr6 112618158 112618164 NFIC JASPAR yes 104410666
chr6 112618159 112618174 AR JASPAR yes 70420606
chr6 112618159 112618174 AR JASPAR yes 104410667
chr6 112618160 112618175 ESR2 JASPAR yes 70420607
chr6 112618160 112618175 ESR2 JASPAR yes 104410668
SNP sites on vista53192[chr6:112617826-112618166]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 112617937 rs77546568 A G
NR2F1
9267476
chr6 112617939 rs76065511 A C
NR2F1
9267477
chr6 112618010 rs148459883 C G no 9267478
chr6 112618050 rs75450372 A G
DUXA H1TF2 NFE NFYA NFYB PBX1 SRF
9267479
chr6 112618054 rs544383221 A G
DUXA NFYA NFYB PBX1
9267480
chr6 112618077 rs114128509 G A,C no 9267481
chr6 112618106 rs554818572 T G
RFX2 RFX3 RFX4 RFX5
9267482
chr6 112618156 rs145993949 A G
IRF1 NFIA
9267483
Genes possibly regulated by vista53192[chr6:112617826-112618166]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 112429963 112576141 - LAMA4 ENSG00000112769.14 112576141 0.83 0.99 6881 58315
chr6 112668532 112672498 + RFPL4B ENSG00000251258.1 112668532 0.96 1.0 6882 49634
Expression level of Genes
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miRNAs possibly regulated by vista53192[chr6:112617826-112618166]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results