EnhancerDB
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  3. vista53195[chr6:112619942-112620186]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53195[chr6:112619942-112620186]
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Tissue distribution of vista53195
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Transcription factor that possibly regulate vista53195[chr6:112619942-112620186]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 112619944 112619962 NR3C1 JASPAR yes 70420666
chr6 112619944 112619962 NR3C1 JASPAR yes 104410872
chr6 112619948 112619958 PAX3 JASPAR yes 70420667
chr6 112619948 112619958 PAX7 JASPAR yes 70420668
chr6 112619948 112619958 PAX3 JASPAR yes 104410873
chr6 112619948 112619958 PAX7 JASPAR yes 104410874
chr6 112619959 112619970 RUNX1 JASPAR yes 70420669
chr6 112619959 112619970 RUNX1 JASPAR yes 104410875
chr6 112619965 112619969 YY1 TRANSFAC yes 70420670
chr6 112619965 112619969 YY1 TRANSFAC yes 104410876
chr6 112619970 112619974 YY1 TRANSFAC yes 70420671
chr6 112619970 112619974 YY1 TRANSFAC yes 104410877
chr6 112619970 112619991 IRF1 JASPAR yes 70420672
chr6 112619970 112619991 IRF1 JASPAR yes 104410878
chr6 112619972 112619993 IRF1 JASPAR yes 70420673
chr6 112619972 112619993 IRF1 JASPAR yes 104410879
chr6 112619973 112619994 ZNF263 JASPAR yes 70420674
chr6 112619973 112619994 ZNF263 JASPAR yes 104410880
chr6 112619974 112619989 PRDM1 JASPAR yes 70420675
chr6 112619974 112619989 PRDM1 JASPAR yes 104410881
chr6 112619975 112619996 ZNF263 JASPAR yes 70420676
chr6 112619975 112619996 ZNF263 JASPAR yes 104410882
chr6 112619976 112619991 PRDM1 JASPAR yes 70420677
chr6 112619976 112619991 PRDM1 JASPAR yes 104410883
chr6 112619977 112619998 ZNF263 JASPAR yes 70420678
chr6 112619977 112619998 ZNF263 JASPAR yes 104410884
chr6 112619978 112619993 PRDM1 JASPAR yes 70420679
chr6 112619978 112619993 PRDM1 JASPAR yes 104410885
chr6 112619979 112620000 ZNF263 JASPAR yes 70420680
chr6 112619979 112620000 ZNF263 JASPAR yes 104410886
chr6 112619980 112619995 PRDM1 JASPAR yes 70420681
chr6 112619980 112619995 PRDM1 JASPAR yes 104410887
chr6 112619982 112619997 PRDM1 JASPAR yes 70420682
chr6 112619982 112619997 PRDM1 JASPAR yes 104410888
chr6 112619984 112619999 PRDM1 JASPAR yes 70420683
chr6 112619984 112619999 PRDM1 JASPAR yes 104410889
chr6 112619986 112620001 PRDM1 JASPAR yes 70420684
chr6 112619986 112620001 PRDM1 JASPAR yes 104410890
chr6 112619998 112620018 RREB1 JASPAR yes 70420685
chr6 112619998 112620018 RREB1 JASPAR yes 104410891
chr6 112620006 112620026 RREB1 JASPAR yes 70420686
chr6 112620006 112620026 RREB1 JASPAR yes 104410892
chr6 112620008 112620028 RREB1 JASPAR yes 70420687
chr6 112620008 112620028 RREB1 JASPAR yes 104410893
chr6 112620035 112620040 ETS2 TRANSFAC yes 70420688
chr6 112620035 112620040 ETS2 TRANSFAC yes 104410894
chr6 112620046 112620067 IRF1 JASPAR yes 70420689
chr6 112620046 112620067 IRF1 JASPAR yes 104410895
chr6 112620047 112620061 RXRB JASPAR yes 70420690
chr6 112620047 112620061 RXRB JASPAR yes 104410896
chr6 112620048 112620063 PRDM1 JASPAR yes 70420691
chr6 112620048 112620063 PRDM1 JASPAR yes 104410897
chr6 112620054 112620061 NKX3-1 JASPAR yes 70420692
chr6 112620054 112620061 NKX3-1 JASPAR yes 104410898
chr6 112620067 112620082 AR JASPAR yes 70420693
chr6 112620067 112620082 AR JASPAR yes 104410899
chr6 112620088 112620100 PROX1 JASPAR yes 70420694
chr6 112620088 112620100 PROX1 JASPAR yes 104410900
chr6 112620110 112620120 SMAD3 JASPAR yes 70420695
chr6 112620110 112620120 SMAD3 JASPAR yes 104410901
chr6 112620120 112620134 JUN JASPAR yes 70420696
chr6 112620120 112620134 JUN JASPAR yes 104410902
chr6 112620122 112620133 BATF JASPAR yes 70420697
chr6 112620122 112620133 BATF JASPAR yes 104410903
chr6 112620124 112620135 FOS JASPAR yes 70420698
chr6 112620124 112620135 JUND JASPAR yes 70420699
chr6 112620124 112620135 FOS JASPAR yes 104410904
chr6 112620124 112620135 JUND JASPAR yes 104410905
chr6 112620124 112620142 MAFF JASPAR yes 70420700
chr6 112620124 112620142 MAFF JASPAR yes 104410906
chr6 112620125 112620140 MAFK JASPAR yes 70420701
chr6 112620125 112620140 MAFK JASPAR yes 104410907
chr6 112620126 112620132 JUN TRANSFAC yes 70420702
chr6 112620126 112620132 JUN TRANSFAC yes 104410908
chr6 112620139 112620143 YY1 TRANSFAC yes 70420703
chr6 112620139 112620143 YY1 TRANSFAC yes 104410909
chr6 112620152 112620163 NFKB1 JASPAR yes 70420704
chr6 112620152 112620163 NFKB1 JASPAR yes 104410910
chr6 112620153 112620163 NFKB1 JASPAR yes 70420705
chr6 112620153 112620163 NFKB1 JASPAR yes 104410911
chr6 112620168 112620179 E2F6 JASPAR yes 70420706
chr6 112620168 112620179 E2F6 JASPAR yes 104410912
SNP sites on vista53195[chr6:112619942-112620186]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 112619974 rs151274128 T TTCTC,TTCTCTC,TTCTCTCTCTC
IRF1 PRDM1 YY1 ZNF263
9267506
chr6 112619974 rs57620979 T TTCTC,TTCTCTCTC
IRF1 PRDM1 YY1 ZNF263
9267507
chr6 112620002 rs10872078 G C
RREB1
9267508
chr6 112620011 rs199567235 TGTGC T
RREB1
9267509
chr6 112620015 rs12212112 C T
RREB1
9267510
chr6 112620171 rs7748481 C G
E2F6
9267511
chr6 112620184 rs55959334 G A,T no 9267512
Genes possibly regulated by vista53195[chr6:112619942-112620186]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 112429963 112576141 - LAMA4 ENSG00000112769.14 112576141 0.83 0.99 6881 56199
chr6 112668532 112672498 + RFPL4B ENSG00000251258.1 112668532 0.96 1.0 6882 51654
Expression level of Genes
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miRNAs possibly regulated by vista53195[chr6:112619942-112620186]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results