EnhancerDB
  1. Home
  2. Enhancers
  3. vista53196[chr6:112629632-112629958]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53196[chr6:112629632-112629958]
Back to top
Tissue distribution of vista53196
Back to top
Transcription factor that possibly regulate vista53196[chr6:112629632-112629958]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 112629653 112629671 SRF JASPAR yes 70420707
chr6 112629653 112629671 SRF JASPAR yes 104411752
chr6 112629668 112629673 MYC TRANSFAC yes 70420708
chr6 112629668 112629673 MYC TRANSFAC yes 104411753
chr6 112629679 112629694 NFYB JASPAR yes 70420709
chr6 112629679 112629694 NFYB JASPAR yes 104411754
chr6 112629681 112629697 NFYA JASPAR yes 70420710
chr6 112629681 112629697 NFYA JASPAR yes 104411755
chr6 112629682 112629700 NFYA JASPAR yes 70420711
chr6 112629682 112629700 NFYA JASPAR yes 104411756
chr6 112629683 112629695 PBX1 JASPAR yes 70420712
chr6 112629683 112629695 PBX1 JASPAR yes 104411757
chr6 112629683 112629703 RREB1 JASPAR yes 70420713
chr6 112629683 112629703 RREB1 JASPAR yes 104411758
chr6 112629686 112629690 H1TF2 TRANSFAC yes 70420714
chr6 112629686 112629690 NFE TRANSFAC yes 70420715
chr6 112629686 112629690 SRF TRANSFAC yes 70420716
chr6 112629686 112629690 H1TF2 TRANSFAC yes 104411759
chr6 112629686 112629690 NFE TRANSFAC yes 104411760
chr6 112629686 112629690 SRF TRANSFAC yes 104411761
chr6 112629692 112629708 SOX4 JASPAR yes 70420717
chr6 112629692 112629708 SOX4 JASPAR yes 104411762
chr6 112629693 112629708 SOX21 JASPAR yes 70420718
chr6 112629693 112629708 SOX21 JASPAR yes 104411763
chr6 112629701 112629707 LEF1 TRANSFAC yes 70420719
chr6 112629701 112629707 TCF4 TRANSFAC yes 70420720
chr6 112629701 112629707 LEF1 TRANSFAC yes 104411764
chr6 112629701 112629707 TCF4 TRANSFAC yes 104411765
chr6 112629707 112629717 SREBF2 JASPAR yes 70420721
chr6 112629707 112629717 SREBF2 JASPAR yes 104411766
chr6 112629711 112629722 HOXC13 JASPAR yes 70420722
chr6 112629711 112629722 HOXD12 JASPAR yes 70420723
chr6 112629711 112629722 HOXC13 JASPAR yes 104411767
chr6 112629711 112629722 HOXD12 JASPAR yes 104411768
chr6 112629712 112629721 CDX1 JASPAR yes 70420724
chr6 112629712 112629721 CDX1 JASPAR yes 104411769
chr6 112629712 112629722 HOXA13 JASPAR yes 70420725
chr6 112629712 112629722 HOXB13 JASPAR yes 70420726
chr6 112629712 112629722 HOXC10 JASPAR yes 70420727
chr6 112629712 112629722 HOXD11 JASPAR yes 70420728
chr6 112629712 112629722 HOXD13 JASPAR yes 70420729
chr6 112629712 112629722 HOXA13 JASPAR yes 104411770
chr6 112629712 112629722 HOXB13 JASPAR yes 104411771
chr6 112629712 112629722 HOXC10 JASPAR yes 104411772
chr6 112629712 112629722 HOXD11 JASPAR yes 104411773
chr6 112629712 112629722 HOXD13 JASPAR yes 104411774
chr6 112629737 112629743 SOX10 JASPAR yes 70420730
chr6 112629737 112629743 SOX10 JASPAR yes 104411775
chr6 112629790 112629801 USF2 JASPAR yes 70420731
chr6 112629790 112629801 USF2 JASPAR yes 104411776
chr6 112629791 112629801 MAX JASPAR yes 70420732
chr6 112629791 112629801 MAX JASPAR yes 104411777
chr6 112629800 112629810 HOXA13 JASPAR yes 70420733
chr6 112629800 112629810 HOXB13 JASPAR yes 70420734
chr6 112629800 112629810 HOXD13 JASPAR yes 70420735
chr6 112629800 112629810 HOXA13 JASPAR yes 104411778
chr6 112629800 112629810 HOXB13 JASPAR yes 104411779
chr6 112629800 112629810 HOXD13 JASPAR yes 104411780
chr6 112629821 112629824 MYB TRANSFAC yes 70420736
chr6 112629821 112629824 MYB TRANSFAC yes 104411781
chr6 112629825 112629838 ZBTB18 JASPAR yes 70420737
chr6 112629825 112629838 ZBTB18 JASPAR yes 104411782
chr6 112629834 112629849 STAT1 JASPAR yes 70420738
chr6 112629834 112629849 STAT1 JASPAR yes 104411783
chr6 112629836 112629847 STAT1 JASPAR yes 70420739
chr6 112629836 112629847 STAT1 JASPAR yes 104411784
chr6 112629841 112629845 TEAD2 TRANSFAC yes 70420740
chr6 112629841 112629845 TEAD2 TRANSFAC yes 104411785
chr6 112629843 112629846 MYB TRANSFAC yes 70420741
chr6 112629843 112629846 MYB TRANSFAC yes 104411786
chr6 112629849 112629853 LFA1 TRANSFAC yes 70420742
chr6 112629849 112629853 LFA1 TRANSFAC yes 104411787
chr6 112629850 112629860 HESX1 JASPAR yes 70420743
chr6 112629850 112629860 HESX1 JASPAR yes 104411788
chr6 112629871 112629877 MZF1 JASPAR yes 70420744
chr6 112629871 112629877 MZF1 JASPAR yes 104411789
chr6 112629884 112629890 SOX10 JASPAR yes 70420745
chr6 112629884 112629890 SOX10 JASPAR yes 104411790
chr6 112629888 112629894 HiNF-A TRANSFAC yes 70420746
chr6 112629888 112629894 HiNF-A TRANSFAC yes 104411791
chr6 112629890 112629905 JUND JASPAR yes 70420747
chr6 112629890 112629905 JUND JASPAR yes 104411792
chr6 112629891 112629904 JUN JASPAR yes 70420748
chr6 112629891 112629904 JUN JASPAR yes 104411793
chr6 112629892 112629905 ATF4 JASPAR yes 70420749
chr6 112629892 112629905 ATF4 JASPAR yes 104411794
chr6 112629893 112629904 CEBPA JASPAR yes 70420750
chr6 112629893 112629904 CEBPA JASPAR yes 104411795
chr6 112629894 112629905 CEBPB JASPAR yes 70420751
chr6 112629894 112629905 CEBPB JASPAR yes 104411796
chr6 112629907 112629917 TFAP4 JASPAR yes 70420752
chr6 112629907 112629917 TFAP4 JASPAR yes 104411797
chr6 112629915 112629930 ESR2 JASPAR yes 70420753
chr6 112629915 112629930 ESR2 JASPAR yes 104411798
chr6 112629916 112629920 ESR1 TRANSFAC yes 70420754
chr6 112629916 112629920 ESR1 TRANSFAC yes 104411799
SNP sites on vista53196[chr6:112629632-112629958]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 112629639 rs7772749 A G no 9267597
chr6 112629732 rs147451281 A T no 9267598
chr6 112629868 rs545141836 C A no 9267599
Genes possibly regulated by vista53196[chr6:112629632-112629958]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 112429963 112576141 - LAMA4 ENSG00000112769.14 112576141 0.83 0.99 6881 46509
chr6 112668532 112672498 + RFPL4B ENSG00000251258.1 112668532 0.96 1.0 6882 61426
Expression level of Genes
Back to top
miRNAs possibly regulated by vista53196[chr6:112629632-112629958]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results