EnhancerDB
  1. Home
  2. Enhancers
  3. vista5325[chr1:225881856-225882162]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5325[chr1:225881856-225882162]
Back to top
Tissue distribution of vista5325
Back to top
Transcription factor that possibly regulate vista5325[chr1:225881856-225882162]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 225881725 225882275 GATA2 UCSC Txn Factor no Conserved 107874793
chr1 225881910 225882196 FOXA1 UCSC Txn Factor no Conserved 107874834
chr1 225881950 225882173 FOXA2 UCSC Txn Factor no Conserved 107874841
chr1 225881851 225881863 MEF2A JASPAR yes 35762533
chr1 225881851 225881863 MEF2D JASPAR yes 35762534
chr1 225881851 225881863 MEF2A JASPAR yes 118469514
chr1 225881851 225881863 MEF2D JASPAR yes 118469515
chr1 225881853 225881856 MYB TRANSFAC yes 35762535
chr1 225881853 225881856 MYB TRANSFAC yes 118469516
chr1 225881853 225881862 SOX9 JASPAR yes 35762536
chr1 225881853 225881862 SOX9 JASPAR yes 118469517
chr1 225881870 225881874 YY1 TRANSFAC yes 35762537
chr1 225881870 225881874 YY1 TRANSFAC yes 118469518
chr1 225881889 225881895 HiNF-A TRANSFAC yes 35762538
chr1 225881889 225881895 HiNF-A TRANSFAC yes 118469519
chr1 225881906 225881910 YY1 TRANSFAC yes 35762539
chr1 225881906 225881910 YY1 TRANSFAC yes 118469520
chr1 225881936 225881947 ESRRB JASPAR yes 35762540
chr1 225881936 225881947 ESRRB JASPAR yes 118469521
chr1 225881944 225881958 ZIC1 JASPAR yes 35762541
chr1 225881944 225881958 ZIC1 JASPAR yes 118469522
chr1 225881944 225881959 ZIC3 JASPAR yes 35762542
chr1 225881944 225881959 ZIC3 JASPAR yes 118469523
chr1 225881984 225881992 GATA5 JASPAR yes 35762543
chr1 225881984 225881992 GATA5 JASPAR yes 118469524
chr1 225881995 225882009 GATA2 JASPAR yes 35762544
chr1 225881995 225882009 GATA2 JASPAR yes 118469525
chr1 225881997 225882005 GATA3 JASPAR yes 35762545
chr1 225881997 225882005 GATA5 JASPAR yes 35762546
chr1 225881997 225882005 GATA3 JASPAR yes 118469526
chr1 225881997 225882005 GATA5 JASPAR yes 118469527
chr1 225882002 225882017 HSF1 JASPAR yes 35762547
chr1 225882002 225882017 HSF1 JASPAR yes 118469528
chr1 225882003 225882016 HSF1 JASPAR yes 35762548
chr1 225882003 225882016 HSF2 JASPAR yes 35762549
chr1 225882003 225882016 HSF4 JASPAR yes 35762550
chr1 225882003 225882016 HSF1 JASPAR yes 118469529
chr1 225882003 225882016 HSF2 JASPAR yes 118469530
chr1 225882003 225882016 HSF4 JASPAR yes 118469531
chr1 225882004 225882022 TP53 JASPAR yes 35762551
chr1 225882004 225882022 TP53 JASPAR yes 118469532
chr1 225882017 225882031 BATF3 JASPAR yes 35762552
chr1 225882017 225882031 BATF3 JASPAR yes 118469533
chr1 225882020 225882035 MAFK JASPAR yes 35762553
chr1 225882020 225882035 MAFK JASPAR yes 118469534
chr1 225882024 225882035 NRL JASPAR yes 35762554
chr1 225882024 225882035 NRL JASPAR yes 118469535
chr1 225882031 225882041 SREBF1 JASPAR yes 35762555
chr1 225882031 225882041 SREBF2 JASPAR yes 35762556
chr1 225882031 225882041 SREBF1 JASPAR yes 118469536
chr1 225882031 225882041 SREBF2 JASPAR yes 118469537
chr1 225882038 225882042 YY1 TRANSFAC yes 35762557
chr1 225882038 225882042 YY1 TRANSFAC yes 118469538
chr1 225882042 225882045 MYB TRANSFAC yes 35762558
chr1 225882042 225882045 MYB TRANSFAC yes 118469539
chr1 225882047 225882058 FOXA1 JASPAR yes 35762559
chr1 225882047 225882058 FOXA1 JASPAR yes 118469540
chr1 225882047 225882062 FOXA1 JASPAR yes 35762560
chr1 225882047 225882062 FOXA1 JASPAR yes 118469541
chr1 225882048 225882059 FOXB1 JASPAR yes 35762561
chr1 225882048 225882059 FOXC1 JASPAR yes 35762562
chr1 225882048 225882059 FOXB1 JASPAR yes 118469542
chr1 225882048 225882059 FOXC1 JASPAR yes 118469543
chr1 225882048 225882060 FOXC2 JASPAR yes 35762563
chr1 225882048 225882060 FOXC2 JASPAR yes 118469544
chr1 225882067 225882078 FLI1 JASPAR yes 35762564
chr1 225882067 225882078 FLI1 JASPAR yes 118469545
chr1 225882071 225882076 ETS2 TRANSFAC yes 35762565
chr1 225882071 225882076 ETS2 TRANSFAC yes 118469546
chr1 225882095 225882110 FOXP1 JASPAR yes 35762566
chr1 225882095 225882110 FOXP1 JASPAR yes 118469547
chr1 225882100 225882109 SRY JASPAR yes 35762567
chr1 225882100 225882109 SRY JASPAR yes 118469548
chr1 225882110 225882123 ELF1 JASPAR yes 35762568
chr1 225882110 225882123 ELF1 JASPAR yes 118469549
chr1 225882136 225882142 TCF4 TRANSFAC yes 35762569
chr1 225882136 225882142 TCF4 TRANSFAC yes 118469550
chr1 225882139 225882153 TCF7L2 JASPAR yes 35762570
chr1 225882139 225882153 TCF7L2 JASPAR yes 118469551
chr1 225882139 225882154 LEF1 JASPAR yes 35762571
chr1 225882139 225882154 LEF1 JASPAR yes 118469552
chr1 225882144 225882150 SOX10 JASPAR yes 35762572
chr1 225882144 225882150 SOX10 JASPAR yes 118469553
chr1 225882152 225882164 GLI2 JASPAR yes 35762573
chr1 225882152 225882164 ZBTB7B JASPAR yes 35762574
chr1 225882152 225882164 ZBTB7C JASPAR yes 35762575
chr1 225882152 225882164 GLI2 JASPAR yes 118469554
chr1 225882152 225882164 ZBTB7B JASPAR yes 118469555
chr1 225882152 225882164 ZBTB7C JASPAR yes 118469556
SNP sites on vista5325[chr1:225881856-225882162]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 225881921 rs530143171 A G
FOXA1 GATA2
986768
chr1 225881924 rs11805309 C G
FOXA1 GATA2
986769
chr1 225881953 rs148833062 G A
FOXA1 FOXA2 GATA2 ZIC1 ZIC3
986770
chr1 225882046 rs188621631 C A
FOXA1 FOXA2 GATA2
986771
chr1 225882159 rs2657560 A G
FOXA1 FOXA2 GATA2 GLI2 ZBTB7B ZBTB7C
986772
Genes possibly regulated by vista5325[chr1:225881856-225882162]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 225674537 225840844 - ENAH ENSG00000154380.12 225840844 0.72 1.0 1887 58988
chr1 225965531 225978168 + SRP9 ENSG00000143742.8 225965531 0.75 0.97 1888 16631
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5325[chr1:225881856-225882162]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results