EnhancerDB
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  3. vista533[chr1:16677236-16677843]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista533[chr1:16677236-16677843]
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Tissue distribution of vista533
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Transcription factor that possibly regulate vista533[chr1:16677236-16677843]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 16677236 16677251 FOXP1 JASPAR yes 27041248
chr1 16677236 16677251 FOXP1 JASPAR yes 118239208
chr1 16677237 16677252 FOXP1 JASPAR yes 27041249
chr1 16677237 16677252 FOXP1 JASPAR yes 118239209
chr1 16677237 16677258 IRF1 JASPAR yes 27041250
chr1 16677237 16677258 IRF1 JASPAR yes 118239210
chr1 16677238 16677253 FOXP1 JASPAR yes 27041251
chr1 16677238 16677253 FOXP1 JASPAR yes 118239211
chr1 16677238 16677259 IRF1 JASPAR yes 27041252
chr1 16677238 16677259 IRF1 JASPAR yes 118239212
chr1 16677239 16677254 FOXP1 JASPAR yes 27041253
chr1 16677239 16677254 FOXP1 JASPAR yes 118239213
chr1 16677239 16677260 IRF1 JASPAR yes 27041254
chr1 16677239 16677260 IRF1 JASPAR yes 118239214
chr1 16677240 16677255 FOXP1 JASPAR yes 27041255
chr1 16677240 16677255 FOXP1 JASPAR yes 118239215
chr1 16677240 16677261 IRF1 JASPAR yes 27041256
chr1 16677240 16677261 IRF1 JASPAR yes 118239216
chr1 16677241 16677256 FOXP1 JASPAR yes 27041257
chr1 16677241 16677256 FOXP1 JASPAR yes 118239217
chr1 16677243 16677258 FOXP1 JASPAR yes 27041258
chr1 16677243 16677258 FOXP1 JASPAR yes 118239218
chr1 16677244 16677265 IRF1 JASPAR yes 27041259
chr1 16677244 16677265 IRF1 JASPAR yes 118239219
chr1 16677245 16677260 FOXP1 JASPAR yes 27041260
chr1 16677245 16677260 FOXP1 JASPAR yes 118239220
chr1 16677248 16677262 SPIC JASPAR yes 27041261
chr1 16677248 16677262 STAT1 JASPAR yes 27041262
chr1 16677248 16677262 SPIC JASPAR yes 118239221
chr1 16677248 16677262 STAT1 JASPAR yes 118239222
chr1 16677248 16677263 PRDM1 JASPAR yes 27041263
chr1 16677248 16677263 STAT2 JASPAR yes 27041264
chr1 16677248 16677263 PRDM1 JASPAR yes 118239223
chr1 16677248 16677263 STAT2 JASPAR yes 118239224
chr1 16677248 16677269 IRF1 JASPAR yes 27041265
chr1 16677248 16677269 IRF1 JASPAR yes 118239225
chr1 16677250 16677271 IRF1 JASPAR yes 27041266
chr1 16677250 16677271 IRF1 JASPAR yes 118239226
chr1 16677252 16677273 IRF1 JASPAR yes 27041267
chr1 16677252 16677273 ZNF263 JASPAR yes 27041268
chr1 16677252 16677273 IRF1 JASPAR yes 118239227
chr1 16677252 16677273 ZNF263 JASPAR yes 118239228
chr1 16677256 16677277 IRF1 JASPAR yes 27041269
chr1 16677256 16677277 ZNF263 JASPAR yes 27041270
chr1 16677256 16677277 IRF1 JASPAR yes 118239229
chr1 16677256 16677277 ZNF263 JASPAR yes 118239230
chr1 16677260 16677281 IRF1 JASPAR yes 27041271
chr1 16677260 16677281 ZNF263 JASPAR yes 27041272
chr1 16677260 16677281 IRF1 JASPAR yes 118239231
chr1 16677260 16677281 ZNF263 JASPAR yes 118239232
chr1 16677264 16677285 IRF1 JASPAR yes 27041273
chr1 16677264 16677285 ZNF263 JASPAR yes 27041274
chr1 16677264 16677285 IRF1 JASPAR yes 118239233
chr1 16677264 16677285 ZNF263 JASPAR yes 118239234
chr1 16677268 16677289 IRF1 JASPAR yes 27041275
chr1 16677268 16677289 ZNF263 JASPAR yes 27041276
chr1 16677268 16677289 IRF1 JASPAR yes 118239235
chr1 16677268 16677289 ZNF263 JASPAR yes 118239236
chr1 16677271 16677292 ZNF263 JASPAR yes 27041277
chr1 16677271 16677292 ZNF263 JASPAR yes 118239237
chr1 16677272 16677293 IRF1 JASPAR yes 27041278
chr1 16677272 16677293 IRF1 JASPAR yes 118239238
chr1 16677293 16677297 ESR1 TRANSFAC yes 27041279
chr1 16677293 16677297 ESR1 TRANSFAC yes 118239239
chr1 16677293 16677308 HNF1A JASPAR yes 27041280
chr1 16677293 16677308 HNF1A JASPAR yes 118239240
chr1 16677294 16677306 HNF1B JASPAR yes 27041281
chr1 16677294 16677306 HNF1B JASPAR yes 118239241
chr1 16677294 16677307 HNF1B JASPAR yes 27041282
chr1 16677294 16677307 HNF1B JASPAR yes 118239242
chr1 16677303 16677306 MYB TRANSFAC yes 27041283
chr1 16677303 16677306 MYB TRANSFAC yes 118239243
chr1 16677310 16677320 MYF6 JASPAR yes 27041284
chr1 16677310 16677320 MYF6 JASPAR yes 118239244
chr1 16677312 16677317 MYC TRANSFAC yes 27041285
chr1 16677312 16677317 MYC TRANSFAC yes 118239245
chr1 16677319 16677323 YY1 TRANSFAC yes 27041286
chr1 16677319 16677323 YY1 TRANSFAC yes 118239246
chr1 16677322 16677331 SRY JASPAR yes 27041287
chr1 16677322 16677331 SRY JASPAR yes 118239247
chr1 16677324 16677327 MYB TRANSFAC yes 27041288
chr1 16677324 16677327 MYB TRANSFAC yes 118239248
chr1 16677325 16677341 SOX4 JASPAR yes 27041289
chr1 16677325 16677341 SOX8 JASPAR yes 27041290
chr1 16677325 16677341 SOX4 JASPAR yes 118239249
chr1 16677325 16677341 SOX8 JASPAR yes 118239250
chr1 16677349 16677369 TP53 JASPAR yes 27041291
chr1 16677349 16677369 TP53 JASPAR yes 118239251
chr1 16677365 16677381 SOX8 JASPAR yes 27041292
chr1 16677365 16677381 SOX8 JASPAR yes 118239252
chr1 16677372 16677385 DUXA JASPAR yes 27041293
chr1 16677372 16677385 DUXA JASPAR yes 118239253
chr1 16677373 16677384 DUX4 JASPAR yes 27041294
chr1 16677373 16677384 DUX4 JASPAR yes 118239254
chr1 16677374 16677387 ATF4 JASPAR yes 27041295
chr1 16677374 16677387 ATF4 JASPAR yes 118239255
chr1 16677375 16677380 MYB TRANSFAC yes 27041296
chr1 16677375 16677380 MYB TRANSFAC yes 118239256
chr1 16677376 16677390 JUN JASPAR yes 27041297
chr1 16677376 16677390 JUN JASPAR yes 118239257
chr1 16677377 16677383 JUN TRANSFAC yes 27041298
chr1 16677377 16677383 JUN TRANSFAC yes 118239258
chr1 16677384 16677396 MEF2A JASPAR yes 27041299
chr1 16677384 16677396 MEF2A JASPAR yes 118239259
chr1 16677386 16677390 YY1 TRANSFAC yes 27041300
chr1 16677386 16677390 YY1 TRANSFAC yes 118239260
chr1 16677404 16677415 FOXA1 JASPAR yes 27041301
chr1 16677404 16677415 FOXA1 JASPAR yes 118239261
chr1 16677404 16677419 FOXA1 JASPAR yes 27041302
chr1 16677404 16677419 FOXA1 JASPAR yes 118239262
chr1 16677405 16677417 FOXC2 JASPAR yes 27041303
chr1 16677405 16677417 FOXC2 JASPAR yes 118239263
chr1 16677410 16677426 SOX4 JASPAR yes 27041304
chr1 16677410 16677426 SOX4 JASPAR yes 118239264
chr1 16677424 16677428 TEAD2 TRANSFAC yes 27041305
chr1 16677424 16677428 TEAD2 TRANSFAC yes 118239265
chr1 16677424 16677429 TBP TRANSFAC yes 27041306
chr1 16677424 16677429 TBP TRANSFAC yes 118239266
chr1 16677424 16677430 TFIID TRANSFAC yes 27041307
chr1 16677424 16677430 TFIID TRANSFAC yes 118239267
chr1 16677429 16677440 FOXC1 JASPAR yes 27041308
chr1 16677429 16677440 FOXC1 JASPAR yes 118239268
chr1 16677449 16677464 NFYB JASPAR yes 27041309
chr1 16677449 16677464 NFYB JASPAR yes 118239269
chr1 16677451 16677467 NFYA JASPAR yes 27041310
chr1 16677451 16677467 NFYA JASPAR yes 118239270
chr1 16677456 16677460 H1TF2 TRANSFAC yes 27041311
chr1 16677456 16677460 NFE TRANSFAC yes 27041312
chr1 16677456 16677460 SRF TRANSFAC yes 27041313
chr1 16677456 16677460 H1TF2 TRANSFAC yes 118239271
chr1 16677456 16677460 NFE TRANSFAC yes 118239272
chr1 16677456 16677460 SRF TRANSFAC yes 118239273
chr1 16677457 16677468 PHOX2A JASPAR yes 27041314
chr1 16677457 16677468 PHOX2A JASPAR yes 118239274
chr1 16677461 16677472 FOXH1 JASPAR yes 27041315
chr1 16677461 16677472 FOXH1 JASPAR yes 118239275
chr1 16677467 16677477 MAX JASPAR yes 27041316
chr1 16677467 16677477 MAX JASPAR yes 118239276
chr1 16677468 16677478 BHLHE40 JASPAR yes 27041317
chr1 16677468 16677478 BHLHE40 JASPAR yes 118239277
chr1 16677470 16677475 MYC TRANSFAC yes 27041318
chr1 16677470 16677475 USF1 TRANSFAC yes 27041319
chr1 16677470 16677475 USF2 TRANSFAC yes 27041320
chr1 16677470 16677475 MYC TRANSFAC yes 118239278
chr1 16677470 16677475 USF1 TRANSFAC yes 118239279
chr1 16677470 16677475 USF2 TRANSFAC yes 118239280
chr1 16677473 16677484 FOXH1 JASPAR yes 27041321
chr1 16677473 16677484 FOXH1 JASPAR yes 118239281
chr1 16677498 16677501 MYB TRANSFAC yes 27041322
chr1 16677498 16677501 MYB TRANSFAC yes 118239282
chr1 16677509 16677517 HOXA5 JASPAR yes 27041323
chr1 16677509 16677517 HOXA5 JASPAR yes 118239283
chr1 16677563 16677576 NFKB2 JASPAR yes 27041324
chr1 16677563 16677576 NFKB2 JASPAR yes 118239284
chr1 16677567 16677579 E2F8 JASPAR yes 27041325
chr1 16677567 16677579 E2F8 JASPAR yes 118239285
chr1 16677568 16677580 E2F8 JASPAR yes 27041326
chr1 16677568 16677580 E2F8 JASPAR yes 118239286
chr1 16677581 16677586 ETS2 TRANSFAC yes 27041327
chr1 16677581 16677586 ETS2 TRANSFAC yes 118239287
chr1 16677597 16677612 JUND JASPAR yes 27041328
chr1 16677597 16677612 JUND JASPAR yes 118239288
chr1 16677598 16677611 JUN JASPAR yes 27041329
chr1 16677598 16677611 JUN JASPAR yes 118239289
chr1 16677599 16677613 ATF7 JASPAR yes 27041330
chr1 16677599 16677613 BATF3 JASPAR yes 27041331
chr1 16677599 16677613 ATF7 JASPAR yes 118239290
chr1 16677599 16677613 BATF3 JASPAR yes 118239291
chr1 16677600 16677612 JDP2 JASPAR yes 27041332
chr1 16677600 16677612 JDP2 JASPAR yes 118239292
chr1 16677600 16677615 JUND JASPAR yes 27041333
chr1 16677600 16677615 JUND JASPAR yes 118239293
chr1 16677601 16677614 DUXA JASPAR yes 27041334
chr1 16677601 16677614 DUXA JASPAR yes 118239294
chr1 16677603 16677616 ATF4 JASPAR yes 27041335
chr1 16677603 16677616 ATF4 JASPAR yes 118239295
chr1 16677604 16677617 JUN JASPAR yes 27041336
chr1 16677604 16677617 JUN JASPAR yes 118239296
chr1 16677615 16677629 SPI1 JASPAR yes 27041337
chr1 16677615 16677629 SPI1 JASPAR yes 118239297
chr1 16677632 16677636 H1TF2 TRANSFAC yes 27041338
chr1 16677632 16677636 NFE TRANSFAC yes 27041339
chr1 16677632 16677636 SRF TRANSFAC yes 27041340
chr1 16677632 16677636 H1TF2 TRANSFAC yes 118239298
chr1 16677632 16677636 NFE TRANSFAC yes 118239299
chr1 16677632 16677636 SRF TRANSFAC yes 118239300
chr1 16677637 16677648 NFIL3 JASPAR yes 27041341
chr1 16677637 16677648 NFIL3 JASPAR yes 118239301
chr1 16677650 16677654 YY1 TRANSFAC yes 27041342
chr1 16677650 16677654 YY1 TRANSFAC yes 118239302
chr1 16677714 16677720 YY1 JASPAR yes 27041343
chr1 16677714 16677720 YY1 JASPAR yes 118239303
chr1 16677733 16677745 GLI2 JASPAR yes 27041344
chr1 16677733 16677745 GLI2 JASPAR yes 118239304
chr1 16677734 16677743 RUNX2 JASPAR yes 27041345
chr1 16677734 16677743 RUNX2 JASPAR yes 118239305
chr1 16677734 16677744 RUNX3 JASPAR yes 27041346
chr1 16677734 16677744 RUNX3 JASPAR yes 118239306
chr1 16677772 16677778 HiNF-A TRANSFAC yes 27041347
chr1 16677772 16677778 HiNF-A TRANSFAC yes 118239307
chr1 16677789 16677799 ALX3 JASPAR yes 27041348
chr1 16677789 16677799 EN2 JASPAR yes 27041349
chr1 16677789 16677799 ESX1 JASPAR yes 27041350
chr1 16677789 16677799 GBX1 JASPAR yes 27041351
chr1 16677789 16677799 GBX2 JASPAR yes 27041352
chr1 16677789 16677799 GSX1 JASPAR yes 27041353
chr1 16677789 16677799 HESX1 JASPAR yes 27041354
chr1 16677789 16677799 HOXA2 JASPAR yes 27041355
chr1 16677789 16677799 LBX2 JASPAR yes 27041356
chr1 16677789 16677799 LHX2 JASPAR yes 27041357
chr1 16677789 16677799 MIXL1 JASPAR yes 27041358
chr1 16677789 16677799 RAX JASPAR yes 27041359
chr1 16677789 16677799 ALX3 JASPAR yes 118239308
chr1 16677789 16677799 EN2 JASPAR yes 118239309
chr1 16677789 16677799 ESX1 JASPAR yes 118239310
chr1 16677789 16677799 GBX1 JASPAR yes 118239311
chr1 16677789 16677799 GBX2 JASPAR yes 118239312
chr1 16677789 16677799 GSX1 JASPAR yes 118239313
chr1 16677789 16677799 HESX1 JASPAR yes 118239314
chr1 16677789 16677799 HOXA2 JASPAR yes 118239315
chr1 16677789 16677799 LBX2 JASPAR yes 118239316
chr1 16677789 16677799 LHX2 JASPAR yes 118239317
chr1 16677789 16677799 MIXL1 JASPAR yes 118239318
chr1 16677789 16677799 RAX JASPAR yes 118239319
chr1 16677790 16677794 H1TF2 TRANSFAC yes 27041360
chr1 16677790 16677794 NFE TRANSFAC yes 27041361
chr1 16677790 16677794 SRF TRANSFAC yes 27041362
chr1 16677790 16677794 H1TF2 TRANSFAC yes 118239320
chr1 16677790 16677794 NFE TRANSFAC yes 118239321
chr1 16677790 16677794 SRF TRANSFAC yes 118239322
chr1 16677790 16677798 BARX1 JASPAR yes 27041363
chr1 16677790 16677798 BSX JASPAR yes 27041364
chr1 16677790 16677798 EN1 JASPAR yes 27041365
chr1 16677790 16677798 ISX JASPAR yes 27041366
chr1 16677790 16677798 LHX9 JASPAR yes 27041367
chr1 16677790 16677798 MSX1 JASPAR yes 27041368
chr1 16677790 16677798 MSX2 JASPAR yes 27041369
chr1 16677790 16677798 PRRX1 JASPAR yes 27041370
chr1 16677790 16677798 RAX2 JASPAR yes 27041371
chr1 16677790 16677798 SHOX JASPAR yes 27041372
chr1 16677790 16677798 BARX1 JASPAR yes 118239323
chr1 16677790 16677798 BSX JASPAR yes 118239324
chr1 16677790 16677798 EN1 JASPAR yes 118239325
chr1 16677790 16677798 ISX JASPAR yes 118239326
chr1 16677790 16677798 LHX9 JASPAR yes 118239327
chr1 16677790 16677798 MSX1 JASPAR yes 118239328
chr1 16677790 16677798 MSX2 JASPAR yes 118239329
chr1 16677790 16677798 PRRX1 JASPAR yes 118239330
chr1 16677790 16677798 RAX2 JASPAR yes 118239331
chr1 16677790 16677798 SHOX JASPAR yes 118239332
chr1 16677790 16677804 POU1F1 JASPAR yes 27041373
chr1 16677790 16677804 POU1F1 JASPAR yes 118239333
chr1 16677791 16677803 POU3F1 JASPAR yes 27041374
chr1 16677791 16677803 POU3F2 JASPAR yes 27041375
chr1 16677791 16677803 POU3F1 JASPAR yes 118239334
chr1 16677791 16677803 POU3F2 JASPAR yes 118239335
chr1 16677791 16677804 POU3F3 JASPAR yes 27041376
chr1 16677791 16677804 POU3F3 JASPAR yes 118239336
chr1 16677792 16677804 POU2F1 JASPAR yes 27041377
chr1 16677792 16677804 POU2F1 JASPAR yes 118239337
chr1 16677793 16677802 POU3F4 JASPAR yes 27041378
chr1 16677793 16677802 POU5F1B JASPAR yes 27041379
chr1 16677793 16677802 POU3F4 JASPAR yes 118239338
chr1 16677793 16677802 POU5F1B JASPAR yes 118239339
chr1 16677798 16677802 YY1 TRANSFAC yes 27041380
chr1 16677798 16677802 YY1 TRANSFAC yes 118239340
chr1 16677806 16677817 CDX2 JASPAR yes 27041381
chr1 16677806 16677817 CDX2 JASPAR yes 118239341
chr1 16677807 16677818 HOXA10 JASPAR yes 27041382
chr1 16677807 16677818 HOXA10 JASPAR yes 118239342
chr1 16677808 16677817 CDX1 JASPAR yes 27041383
chr1 16677808 16677817 CDX1 JASPAR yes 118239343
chr1 16677808 16677818 HOXA13 JASPAR yes 27041384
chr1 16677808 16677818 HOXB13 JASPAR yes 27041385
chr1 16677808 16677818 HOXD13 JASPAR yes 27041386
chr1 16677808 16677818 HOXA13 JASPAR yes 118239344
chr1 16677808 16677818 HOXB13 JASPAR yes 118239345
chr1 16677808 16677818 HOXD13 JASPAR yes 118239346
chr1 16677829 16677834 ETS2 TRANSFAC yes 27041387
chr1 16677829 16677834 ETS2 TRANSFAC yes 118239347
SNP sites on vista533[chr1:16677236-16677843]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 16677527 rs77767645 T C no 111831
chr1 16677667 rs150042551 A G no 111832
chr1 16677766 rs76148646 A C,G no 111833
chr1 16677784 rs190101696 A C no 111834
chr1 16677827 rs183060078 A G no 111835
Genes possibly regulated by vista533[chr1:16677236-16677843]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 16573334 16678949 - FBXO42 ENSG00000037637.6 16678949 0.55 1.0 229 98894
chr1 16679070 16724640 + SZRD1 ENSG00000055070.12 16679070 0.59 1.0 230 98773
chr1 16713612 16763919 - SPATA21 ENSG00000187144.7 16763919 0.91 1.0 231 13924
chr1 16767167 16786573 + NECAP2 ENSG00000157191.15 16767167 0.64 0.99 232 10676
Expression level of Genes
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miRNAs possibly regulated by vista533[chr1:16677236-16677843]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results