EnhancerDB
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  3. vista5336[chr1:226187685-226188168]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5336[chr1:226187685-226188168]
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Tissue distribution of vista5336
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Transcription factor that possibly regulate vista5336[chr1:226187685-226188168]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226186661 226188252 POLR2A UCSC Txn Factor no Conserved 107875299
chr1 226187007 226187799 GATA1 UCSC Txn Factor no Conserved 107875302
chr1 226187038 226187888 GATA2 UCSC Txn Factor no Conserved 107875303
chr1 226187234 226187716 GTF2B UCSC Txn Factor no Conserved 107875307
chr1 226187691 226187699 GATA5 JASPAR yes 35782849
chr1 226187691 226187699 GATA5 JASPAR yes 118470121
chr1 226187698 226187708 NKX2-3 JASPAR yes 35782850
chr1 226187698 226187708 NKX2-3 JASPAR yes 118470122
chr1 226187699 226187708 NKX2-8 JASPAR yes 35782851
chr1 226187699 226187708 NKX2-8 JASPAR yes 118470123
chr1 226187708 226187723 FOXP1 JASPAR yes 35782852
chr1 226187708 226187723 FOXP1 JASPAR yes 118470124
chr1 226187709 226187720 FOXP2 JASPAR yes 35782853
chr1 226187709 226187720 FOXP2 JASPAR yes 118470125
chr1 226187711 226187719 FOXO3 JASPAR yes 35782854
chr1 226187711 226187719 FOXO3 JASPAR yes 118470126
chr1 226187722 226187726 YY1 TRANSFAC yes 35782855
chr1 226187722 226187726 YY1 TRANSFAC yes 118470127
chr1 226187755 226187763 MEIS3 JASPAR yes 35782856
chr1 226187755 226187763 MEIS3 JASPAR yes 118470128
chr1 226187756 226187768 PKNOX1 JASPAR yes 35782857
chr1 226187756 226187768 TGIF2 JASPAR yes 35782858
chr1 226187756 226187768 PKNOX1 JASPAR yes 118470129
chr1 226187756 226187768 TGIF2 JASPAR yes 118470130
chr1 226187764 226187772 ATF2 TRANSFAC yes 35782859
chr1 226187764 226187772 ATF2 TRANSFAC yes 118470131
chr1 226187765 226187770 ATF1 TRANSFAC yes 35782860
chr1 226187765 226187770 ATF1 TRANSFAC yes 118470132
chr1 226187803 226187806 MYB TRANSFAC yes 35782861
chr1 226187803 226187806 MYB TRANSFAC yes 118470133
chr1 226187812 226187833 REST JASPAR yes 35782862
chr1 226187812 226187833 REST JASPAR yes 118470134
chr1 226187815 226187834 RFX2 JASPAR yes 35782863
chr1 226187815 226187834 RFX2 JASPAR yes 118470135
chr1 226187820 226187830 NFATC3 JASPAR yes 35782864
chr1 226187820 226187830 NFATC3 JASPAR yes 118470136
chr1 226187822 226187830 FOXO3 JASPAR yes 35782865
chr1 226187822 226187830 FOXO3 JASPAR yes 118470137
chr1 226187825 226187831 HiNF-A TRANSFAC yes 35782866
chr1 226187825 226187831 HiNF-A TRANSFAC yes 118470138
chr1 226187838 226187851 POU2F2 JASPAR yes 35782867
chr1 226187838 226187851 POU2F2 JASPAR yes 118470139
chr1 226187838 226187852 POU1F1 JASPAR yes 35782868
chr1 226187838 226187852 POU1F1 JASPAR yes 118470140
chr1 226187839 226187851 POU3F1 JASPAR yes 35782869
chr1 226187839 226187851 POU3F2 JASPAR yes 35782870
chr1 226187839 226187851 POU3F1 JASPAR yes 118470141
chr1 226187839 226187851 POU3F2 JASPAR yes 118470142
chr1 226187839 226187852 POU3F3 JASPAR yes 35782871
chr1 226187839 226187852 POU3F3 JASPAR yes 118470143
chr1 226187840 226187852 POU2F1 JASPAR yes 35782872
chr1 226187840 226187852 POU2F1 JASPAR yes 118470144
chr1 226187841 226187848 POU2F1 TRANSFAC yes 35782873
chr1 226187841 226187848 POU2F2C TRANSFAC yes 35782874
chr1 226187841 226187848 POU2F2 TRANSFAC yes 35782875
chr1 226187841 226187848 POU2F1 TRANSFAC yes 118470145
chr1 226187841 226187848 POU2F2C TRANSFAC yes 118470146
chr1 226187841 226187848 POU2F2 TRANSFAC yes 118470147
chr1 226187841 226187849 POU2F1 TRANSFAC yes 35782876
chr1 226187841 226187849 POU2F1 TRANSFAC yes 118470148
chr1 226187841 226187850 POU3F4 JASPAR yes 35782877
chr1 226187841 226187850 POU5F1B JASPAR yes 35782878
chr1 226187841 226187850 POU3F4 JASPAR yes 118470149
chr1 226187841 226187850 POU5F1B JASPAR yes 118470150
chr1 226187846 226187858 TEF JASPAR yes 35782879
chr1 226187846 226187858 TEF JASPAR yes 118470151
chr1 226187848 226187851 MYB TRANSFAC yes 35782880
chr1 226187848 226187851 MYB TRANSFAC yes 118470152
chr1 226187853 226187856 MYB TRANSFAC yes 35782881
chr1 226187853 226187856 MYB TRANSFAC yes 118470153
chr1 226187867 226187882 IRF9 JASPAR yes 35782882
chr1 226187867 226187882 IRF9 JASPAR yes 118470154
chr1 226187868 226187882 IRF8 JASPAR yes 35782883
chr1 226187868 226187882 IRF8 JASPAR yes 118470155
chr1 226187885 226187900 HNF1A JASPAR yes 35782884
chr1 226187885 226187900 HNF1A JASPAR yes 118470156
chr1 226187886 226187899 HNF1B JASPAR yes 35782885
chr1 226187886 226187899 HNF1B JASPAR yes 118470157
chr1 226187886 226187900 POU4F1 JASPAR yes 35782886
chr1 226187886 226187900 POU4F1 JASPAR yes 118470158
chr1 226187887 226187899 HNF1B JASPAR yes 35782887
chr1 226187887 226187899 HNF1B JASPAR yes 118470159
chr1 226187891 226187895 YY1 TRANSFAC yes 35782888
chr1 226187891 226187895 YY1 TRANSFAC yes 118470160
chr1 226187895 226187898 MYB TRANSFAC yes 35782889
chr1 226187895 226187898 MYB TRANSFAC yes 118470161
chr1 226187903 226187920 ZNF410 JASPAR yes 35782890
chr1 226187903 226187920 ZNF410 JASPAR yes 118470162
chr1 226187910 226187925 MEF2A JASPAR yes 35782891
chr1 226187910 226187925 MEF2A JASPAR yes 118470163
chr1 226187911 226187926 MEF2C JASPAR yes 35782892
chr1 226187911 226187926 MEF2C JASPAR yes 118470164
chr1 226187914 226187918 YY1 TRANSFAC yes 35782893
chr1 226187914 226187918 YY1 TRANSFAC yes 118470165
chr1 226187923 226187939 SOX8 JASPAR yes 35782894
chr1 226187923 226187939 SOX8 JASPAR yes 118470166
chr1 226187954 226187972 RARA JASPAR yes 35782895
chr1 226187954 226187972 RARA JASPAR yes 118470167
chr1 226187955 226187961 GATA3 JASPAR yes 35782896
chr1 226187955 226187961 GATA3 JASPAR yes 118470168
chr1 226187958 226187966 EHF JASPAR yes 35782897
chr1 226187958 226187966 EHF JASPAR yes 118470169
chr1 226187967 226187971 YY1 TRANSFAC yes 35782898
chr1 226187967 226187971 YY1 TRANSFAC yes 118470170
chr1 226187988 226187996 FOXO3 JASPAR yes 35782899
chr1 226187988 226187996 FOXO3 JASPAR yes 118470171
chr1 226187991 226187997 HiNF-A TRANSFAC yes 35782900
chr1 226187991 226187997 HiNF-A TRANSFAC yes 118470172
chr1 226188041 226188047 NFIC JASPAR yes 35782901
chr1 226188041 226188047 NFIC JASPAR yes 118470173
chr1 226188070 226188073 MYB TRANSFAC yes 35782902
chr1 226188070 226188073 MYB TRANSFAC yes 118470174
chr1 226188088 226188098 PAX7 JASPAR yes 35782903
chr1 226188088 226188098 PAX7 JASPAR yes 118470175
chr1 226188090 226188100 BARHL2 JASPAR yes 35782904
chr1 226188090 226188100 BARHL2 JASPAR yes 118470176
chr1 226188096 226188112 SOX4 JASPAR yes 35782905
chr1 226188096 226188112 SOX4 JASPAR yes 118470177
chr1 226188108 226188121 EOMES JASPAR yes 35782906
chr1 226188108 226188121 EOMES JASPAR yes 118470178
chr1 226188109 226188119 TBR1 JASPAR yes 35782907
chr1 226188109 226188119 TBR1 JASPAR yes 118470179
chr1 226188113 226188127 IRF7 JASPAR yes 35782908
chr1 226188113 226188127 IRF8 JASPAR yes 35782909
chr1 226188113 226188127 IRF7 JASPAR yes 118470180
chr1 226188113 226188127 IRF8 JASPAR yes 118470181
chr1 226188119 226188129 TEAD4 JASPAR yes 35782910
chr1 226188119 226188129 TEAD4 JASPAR yes 118470182
chr1 226188136 226188141 ETS2 TRANSFAC yes 35782911
chr1 226188136 226188141 ETS2 TRANSFAC yes 118470183
chr1 226188162 226188166 YY1 TRANSFAC yes 35782912
chr1 226188162 226188166 YY1 TRANSFAC yes 118470184
chr1 226188164 226188174 TBR1 JASPAR yes 35782913
chr1 226188164 226188174 TBR1 JASPAR yes 118470185
SNP sites on vista5336[chr1:226187685-226188168]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226187899 rs2755093 C T
HNF1A HNF1B POLR2A POU4F1
989148
chr1 226187900 rs4427371 A G
HNF1A POLR2A POU4F1
989149
chr1 226188018 rs528671674 T G
POLR2A
989150
chr1 226188058 rs187781908 C G
POLR2A
989151
chr1 226188157 rs116272516 G A
POLR2A
989152
Genes possibly regulated by vista5336[chr1:226187685-226188168]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226073982 226099082 - LEFTY1 ENSG00000243709.1 226099082 0.94 0.84 1891 11397
chr1 226074396 226111978 - RP4-559A3.7 ENSG00000255835.1 226111978 0.95 0.92 1892 24293
chr1 226107578 226111978 - PYCR2 ENSG00000143811.12 226111978 0.59 0.99 1893 24293
chr1 226124298 226129189 - LEFTY2 ENSG00000143768.7 226129189 0.96 1.0 1894 41504
chr1 226170403 226187032 - SDE2 ENSG00000143751.9 226187032 0.67 0.99 1895 99347
chr1 226249552 226259702 + H3F3A ENSG00000163041.5 226249552 0.89 0.84 1896 38616
Expression level of Genes
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miRNAs possibly regulated by vista5336[chr1:226187685-226188168]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results