EnhancerDB
  1. Home
  2. Enhancers
  3. vista5338[chr1:226190534-226190731]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5338[chr1:226190534-226190731]
Back to top
Tissue distribution of vista5338
Back to top
Transcription factor that possibly regulate vista5338[chr1:226190534-226190731]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226189914 226191106 POLR2A UCSC Txn Factor no Conserved 107875357
chr1 226189914 226191106 POLR2A UCSC Txn Factor no Conserved 107875358
chr1 226190441 226190831 NFYB UCSC Txn Factor no Conserved 107875382
chr1 226190623 226190939 EP300 UCSC Txn Factor no Conserved 107875420
chr1 226190641 226190849 TAL1 UCSC Txn Factor no Conserved 107875422
chr1 226190666 226191131 TEAD4 UCSC Txn Factor no Conserved 107875427
chr1 226190532 226190545 ZBTB18 JASPAR yes 35783355
chr1 226190532 226190545 ZBTB18 JASPAR yes 118470316
chr1 226190532 226190548 T JASPAR yes 35783356
chr1 226190532 226190548 T JASPAR yes 118470317
chr1 226190558 226190573 ZIC3 JASPAR yes 35783357
chr1 226190558 226190573 ZIC4 JASPAR yes 35783358
chr1 226190558 226190573 ZIC3 JASPAR yes 118470318
chr1 226190558 226190573 ZIC4 JASPAR yes 118470319
chr1 226190558 226190578 RREB1 JASPAR yes 35783359
chr1 226190558 226190578 RREB1 JASPAR yes 118470320
chr1 226190559 226190573 ZIC1 JASPAR yes 35783360
chr1 226190559 226190573 ZIC1 JASPAR yes 118470321
chr1 226190561 226190581 RREB1 JASPAR yes 35783361
chr1 226190561 226190581 RREB1 JASPAR yes 118470322
chr1 226190565 226190585 RREB1 JASPAR yes 35783362
chr1 226190565 226190585 RREB1 JASPAR yes 118470323
chr1 226190566 226190587 ZNF263 JASPAR yes 35783363
chr1 226190566 226190587 ZNF263 JASPAR yes 118470324
chr1 226190568 226190588 RREB1 JASPAR yes 35783364
chr1 226190568 226190588 RREB1 JASPAR yes 118470325
chr1 226190569 226190590 ZNF263 JASPAR yes 35783365
chr1 226190569 226190590 ZNF263 JASPAR yes 118470326
chr1 226190570 226190576 ZNF354C JASPAR yes 35783366
chr1 226190570 226190576 ZNF354C JASPAR yes 118470327
chr1 226190570 226190590 RREB1 JASPAR yes 35783367
chr1 226190570 226190590 RREB1 JASPAR yes 118470328
chr1 226190589 226190604 TFAP2C JASPAR yes 35783368
chr1 226190589 226190604 TFAP2C JASPAR yes 118470329
chr1 226190590 226190601 TFAP2A JASPAR yes 35783369
chr1 226190590 226190601 TFAP2B JASPAR yes 35783370
chr1 226190590 226190601 TFAP2C JASPAR yes 35783371
chr1 226190590 226190601 TFAP2A JASPAR yes 118470330
chr1 226190590 226190601 TFAP2B JASPAR yes 118470331
chr1 226190590 226190601 TFAP2C JASPAR yes 118470332
chr1 226190597 226190615 TP63 JASPAR yes 35783372
chr1 226190597 226190615 TP73 JASPAR yes 35783373
chr1 226190597 226190615 TP63 JASPAR yes 118470333
chr1 226190597 226190615 TP73 JASPAR yes 118470334
chr1 226190598 226190613 TP53 JASPAR yes 35783374
chr1 226190598 226190613 TP53 JASPAR yes 118470335
chr1 226190617 226190621 NFE TRANSFAC yes 35783375
chr1 226190617 226190621 NFE TRANSFAC yes 118470336
chr1 226190623 226190628 ETS2 TRANSFAC yes 35783376
chr1 226190623 226190628 ETS2 TRANSFAC yes 118470337
chr1 226190635 226190641 SP1 TRANSFAC yes 35783377
chr1 226190635 226190641 SP1 TRANSFAC yes 118470338
chr1 226190635 226190645 SP1 JASPAR yes 35783378
chr1 226190635 226190645 SP1 JASPAR yes 118470339
chr1 226190637 226190642 SP1 TRANSFAC yes 35783379
chr1 226190637 226190642 SP1 TRANSFAC yes 118470340
chr1 226190643 226190657 SPIC JASPAR yes 35783380
chr1 226190643 226190657 SPIC JASPAR yes 118470341
chr1 226190644 226190652 EHF JASPAR yes 35783381
chr1 226190644 226190652 EHF JASPAR yes 118470342
chr1 226190646 226190651 ETS2 TRANSFAC yes 35783382
chr1 226190646 226190651 ETS2 TRANSFAC yes 118470343
chr1 226190661 226190672 FOXP2 JASPAR yes 35783383
chr1 226190661 226190672 FOXP2 JASPAR yes 118470344
chr1 226190670 226190679 SOX9 JASPAR yes 35783384
chr1 226190670 226190679 SOX9 JASPAR yes 118470345
SNP sites on vista5338[chr1:226190534-226190731]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226190606 rs139464646 C T
NFYB POLR2A TP53 TP63 TP73
989170
Genes possibly regulated by vista5338[chr1:226190534-226190731]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226073982 226099082 - LEFTY1 ENSG00000243709.1 226099082 0.94 0.84 1891 8548
chr1 226074396 226111978 - RP4-559A3.7 ENSG00000255835.1 226111978 0.95 0.92 1892 21444
chr1 226107578 226111978 - PYCR2 ENSG00000143811.12 226111978 0.59 0.99 1893 21444
chr1 226124298 226129189 - LEFTY2 ENSG00000143768.7 226129189 0.96 1.0 1894 38655
chr1 226170403 226187032 - SDE2 ENSG00000143751.9 226187032 0.67 0.99 1895 96498
chr1 226249552 226259702 + H3F3A ENSG00000163041.5 226249552 0.89 0.84 1896 41179
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5338[chr1:226190534-226190731]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results