EnhancerDB
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  3. vista5340[chr1:226221412-226221630]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5340[chr1:226221412-226221630]
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Tissue distribution of vista5340
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Transcription factor that possibly regulate vista5340[chr1:226221412-226221630]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226221415 226221424 SRY JASPAR yes 35786689
chr1 226221415 226221424 SRY JASPAR yes 118470441
chr1 226221432 226221441 THAP1 JASPAR yes 35786690
chr1 226221432 226221441 THAP1 JASPAR yes 118470442
chr1 226221435 226221440 ETS2 TRANSFAC yes 35786691
chr1 226221435 226221440 ETS2 TRANSFAC yes 118470443
chr1 226221448 226221453 TFAP2A TRANSFAC yes 35786692
chr1 226221448 226221453 TFAP2A TRANSFAC yes 118470444
chr1 226221448 226221454 MZF1 JASPAR yes 35786693
chr1 226221448 226221454 MZF1 JASPAR yes 118470445
chr1 226221448 226221469 ZNF263 JASPAR yes 35786694
chr1 226221448 226221469 ZNF263 JASPAR yes 118470446
chr1 226221449 226221470 ZNF263 JASPAR yes 35786695
chr1 226221449 226221470 ZNF263 JASPAR yes 118470447
chr1 226221450 226221455 ETS2 TRANSFAC yes 35786696
chr1 226221450 226221455 ETS2 TRANSFAC yes 118470448
chr1 226221457 226221478 ZNF263 JASPAR yes 35786697
chr1 226221457 226221478 ZNF263 JASPAR yes 118470449
chr1 226221460 226221471 FLI1 JASPAR yes 35786698
chr1 226221460 226221471 FLI1 JASPAR yes 118470450
chr1 226221468 226221473 ETS2 TRANSFAC yes 35786699
chr1 226221468 226221473 ETS2 TRANSFAC yes 118470451
chr1 226221470 226221491 ZNF263 JASPAR yes 35786700
chr1 226221470 226221491 ZNF263 JASPAR yes 118470452
chr1 226221471 226221476 ETS2 TRANSFAC yes 35786701
chr1 226221471 226221476 ETS2 TRANSFAC yes 118470453
chr1 226221485 226221490 ETS2 TRANSFAC yes 35786702
chr1 226221485 226221490 ETS2 TRANSFAC yes 118470454
chr1 226221486 226221504 NR3C1 JASPAR yes 35786703
chr1 226221486 226221504 NR3C1 JASPAR yes 118470455
chr1 226221491 226221495 YY1 TRANSFAC yes 35786704
chr1 226221491 226221495 YY1 TRANSFAC yes 118470456
chr1 226221516 226221519 MYB TRANSFAC yes 35786705
chr1 226221516 226221519 MYB TRANSFAC yes 118470457
chr1 226221519 226221531 NHLH1 JASPAR yes 35786706
chr1 226221519 226221531 NHLH1 JASPAR yes 118470458
chr1 226221520 226221530 NHLH1 JASPAR yes 35786707
chr1 226221520 226221530 NHLH1 JASPAR yes 118470459
chr1 226221541 226221553 HINFP JASPAR yes 35786708
chr1 226221541 226221553 HINFP JASPAR yes 118470460
chr1 226221541 226221557 ZNF143 JASPAR yes 35786709
chr1 226221541 226221557 ZNF143 JASPAR yes 118470461
chr1 226221542 226221547 TFAP2A TRANSFAC yes 35786710
chr1 226221542 226221547 TFAP2A TRANSFAC yes 118470462
chr1 226221542 226221548 MZF1 JASPAR yes 35786711
chr1 226221542 226221548 MZF1 JASPAR yes 118470463
chr1 226221592 226221613 ZNF263 JASPAR yes 35786712
chr1 226221592 226221613 ZNF263 JASPAR yes 118470464
chr1 226221594 226221615 ZNF263 JASPAR yes 35786713
chr1 226221594 226221615 ZNF263 JASPAR yes 118470465
chr1 226221606 226221611 TFAP2A TRANSFAC yes 35786714
chr1 226221606 226221611 TFAP2A TRANSFAC yes 118470466
chr1 226221606 226221612 MZF1 JASPAR yes 35786715
chr1 226221606 226221612 MZF1 JASPAR yes 118470467
chr1 226221607 226221618 NFKB1 JASPAR yes 35786716
chr1 226221607 226221618 NFKB1 JASPAR yes 118470468
chr1 226221623 226221635 PBX1 JASPAR yes 35786717
chr1 226221623 226221635 PBX1 JASPAR yes 118470469
chr1 226221626 226221642 NFYA JASPAR yes 35786718
chr1 226221626 226221642 NFYA JASPAR yes 118470470
chr1 226221629 226221644 NFYB JASPAR yes 35786719
chr1 226221629 226221644 NFYB JASPAR yes 118470471
SNP sites on vista5340[chr1:226221412-226221630]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226221435 rs145182904 CG C
ETS2 THAP1
989411
chr1 226221436 rs183088403 G A
ETS2 THAP1
989412
chr1 226221494 rs143723407 T C
NR3C1 YY1
989413
chr1 226221545 rs533574584 G C
HINFP MZF1 TFAP2A ZNF143
989414
chr1 226221619 rs148105237 G A no 989415
Genes possibly regulated by vista5340[chr1:226221412-226221630]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226124298 226129189 - LEFTY2 ENSG00000143768.7 226129189 0.96 1.0 1894 7777
chr1 226170403 226187032 - SDE2 ENSG00000143751.9 226187032 0.67 0.99 1895 65620
chr1 226249552 226259702 + H3F3A ENSG00000163041.5 226249552 0.89 0.84 1896 72078
Expression level of Genes
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miRNAs possibly regulated by vista5340[chr1:226221412-226221630]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results