EnhancerDB
  1. Home
  2. Enhancers
  3. vista5341[chr1:226222205-226222589]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5341[chr1:226222205-226222589]
Back to top
Tissue distribution of vista5341
Back to top
Transcription factor that possibly regulate vista5341[chr1:226222205-226222589]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226222230 226222234 YY1 TRANSFAC yes 35786843
chr1 226222230 226222234 YY1 TRANSFAC yes 118470472
chr1 226222246 226222250 NFE TRANSFAC yes 35786844
chr1 226222246 226222250 NFE TRANSFAC yes 118470473
chr1 226222255 226222259 H4TF2 TRANSFAC yes 35786845
chr1 226222255 226222259 H4TF2 TRANSFAC yes 118470474
chr1 226222256 226222266 MAX JASPAR yes 35786846
chr1 226222256 226222266 MAX JASPAR yes 118470475
chr1 226222294 226222303 THAP1 JASPAR yes 35786847
chr1 226222294 226222303 THAP1 JASPAR yes 118470476
chr1 226222296 226222313 RARA JASPAR yes 35786848
chr1 226222296 226222313 RARA JASPAR yes 118470477
chr1 226222297 226222301 LFA1 TRANSFAC yes 35786849
chr1 226222297 226222301 LFA1 TRANSFAC yes 118470478
chr1 226222304 226222307 MYB TRANSFAC yes 35786850
chr1 226222304 226222307 MYB TRANSFAC yes 118470479
chr1 226222304 226222322 MAFF JASPAR yes 35786851
chr1 226222304 226222322 MAFF JASPAR yes 118470480
chr1 226222305 226222320 MAFK JASPAR yes 35786852
chr1 226222305 226222320 MAFK JASPAR yes 118470481
chr1 226222309 226222320 NRL JASPAR yes 35786853
chr1 226222309 226222320 NRL JASPAR yes 118470482
chr1 226222322 226222337 HNF4A JASPAR yes 35786854
chr1 226222322 226222337 HNF4A JASPAR yes 118470483
chr1 226222323 226222338 HNF4G JASPAR yes 35786855
chr1 226222323 226222338 HNF4G JASPAR yes 118470484
chr1 226222345 226222350 ETS2 TRANSFAC yes 35786856
chr1 226222345 226222350 ETS2 TRANSFAC yes 118470485
chr1 226222359 226222365 NFIC JASPAR yes 35786857
chr1 226222359 226222365 NFIC JASPAR yes 118470486
chr1 226222379 226222385 NFIC JASPAR yes 35786858
chr1 226222379 226222385 NFIC JASPAR yes 118470487
chr1 226222391 226222395 NFE TRANSFAC yes 35786859
chr1 226222391 226222395 NFE TRANSFAC yes 118470488
chr1 226222401 226222420 REST JASPAR yes 35786860
chr1 226222401 226222420 REST JASPAR yes 118470489
chr1 226222403 226222422 CTCF JASPAR yes 35786861
chr1 226222403 226222422 CTCF JASPAR yes 118470490
chr1 226222431 226222447 RFX3 JASPAR yes 35786862
chr1 226222431 226222447 RFX4 JASPAR yes 35786863
chr1 226222431 226222447 RFX3 JASPAR yes 118470491
chr1 226222431 226222447 RFX4 JASPAR yes 118470492
chr1 226222441 226222449 MEIS2 JASPAR yes 35786864
chr1 226222441 226222449 MEIS3 JASPAR yes 35786865
chr1 226222441 226222449 MEIS2 JASPAR yes 118470493
chr1 226222441 226222449 MEIS3 JASPAR yes 118470494
chr1 226222464 226222473 HIC2 JASPAR yes 35786866
chr1 226222464 226222473 HIC2 JASPAR yes 118470495
chr1 226222475 226222486 FOS JASPAR yes 35786867
chr1 226222475 226222486 FOSL1 JASPAR yes 35786868
chr1 226222475 226222486 JUND JASPAR yes 35786869
chr1 226222475 226222486 FOS JASPAR yes 118470496
chr1 226222475 226222486 FOSL1 JASPAR yes 118470497
chr1 226222475 226222486 JUND JASPAR yes 118470498
chr1 226222476 226222487 FOSL2 JASPAR yes 35786870
chr1 226222476 226222487 JUNB JASPAR yes 35786871
chr1 226222476 226222487 FOSL2 JASPAR yes 118470499
chr1 226222476 226222487 JUNB JASPAR yes 118470500
chr1 226222493 226222498 GATA2 JASPAR yes 35786872
chr1 226222493 226222498 GATA2 JASPAR yes 118470501
chr1 226222493 226222504 CDX2 JASPAR yes 35786873
chr1 226222493 226222504 CDX2 JASPAR yes 118470502
chr1 226222497 226222511 SPI1 JASPAR yes 35786874
chr1 226222497 226222511 SPIC JASPAR yes 35786875
chr1 226222497 226222511 SPI1 JASPAR yes 118470503
chr1 226222497 226222511 SPIC JASPAR yes 118470504
chr1 226222503 226222508 ETS2 TRANSFAC yes 35786876
chr1 226222503 226222508 ETS2 TRANSFAC yes 118470505
chr1 226222525 226222529 YY1 TRANSFAC yes 35786877
chr1 226222525 226222529 YY1 TRANSFAC yes 118470506
chr1 226222555 226222567 FOXI1 JASPAR yes 35786878
chr1 226222555 226222567 FOXI1 JASPAR yes 118470507
chr1 226222559 226222575 E2F2 JASPAR yes 35786879
chr1 226222559 226222575 E2F2 JASPAR yes 118470508
chr1 226222572 226222577 GATA2 JASPAR yes 35786880
chr1 226222572 226222577 GATA2 JASPAR yes 118470509
chr1 226222577 226222581 TEAD2 TRANSFAC yes 35786881
chr1 226222577 226222581 TEAD2 TRANSFAC yes 118470510
chr1 226222586 226222590 H1TF2 TRANSFAC yes 35786882
chr1 226222586 226222590 NFE TRANSFAC yes 35786883
chr1 226222586 226222590 SRF TRANSFAC yes 35786884
chr1 226222586 226222590 H1TF2 TRANSFAC yes 118470511
chr1 226222586 226222590 NFE TRANSFAC yes 118470512
chr1 226222586 226222590 SRF TRANSFAC yes 118470513
SNP sites on vista5341[chr1:226222205-226222589]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226222435 rs187178503 C T
RFX3 RFX4
989421
chr1 226222454 rs76589933 C A,T no 989422
chr1 226222455 rs532034006 G A no 989423
chr1 226222522 rs560692913 A G no 989424
Genes possibly regulated by vista5341[chr1:226222205-226222589]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226124298 226129189 - LEFTY2 ENSG00000143768.7 226129189 0.96 1.0 1894 6984
chr1 226170403 226187032 - SDE2 ENSG00000143751.9 226187032 0.67 0.99 1895 64827
chr1 226249552 226259702 + H3F3A ENSG00000163041.5 226249552 0.89 0.84 1896 73037
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5341[chr1:226222205-226222589]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results