EnhancerDB
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  3. vista5342[chr1:226230458-226230596]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5342[chr1:226230458-226230596]
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Tissue distribution of vista5342
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Transcription factor that possibly regulate vista5342[chr1:226230458-226230596]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226230459 226230465 HiNF-A TRANSFAC yes 118470514
chr1 226230478 226230483 H4TF1 TRANSFAC yes 118470515
chr1 226230494 226230509 FOXP1 JASPAR yes 118470516
chr1 226230497 226230511 BATF3 JASPAR yes 118470517
chr1 226230506 226230517 TBX20 JASPAR yes 118470518
chr1 226230511 226230522 FLI1 JASPAR yes 118470519
chr1 226230512 226230522 ETV6 JASPAR yes 118470520
chr1 226230512 226230525 ELF1 JASPAR yes 118470521
chr1 226230512 226230526 SPIC JASPAR yes 118470522
chr1 226230513 226230520 SPI1 JASPAR yes 118470523
chr1 226230513 226230521 EHF JASPAR yes 118470524
chr1 226230515 226230522 SPIB JASPAR yes 118470525
chr1 226230520 226230524 NFE TRANSFAC yes 118470526
chr1 226230524 226230535 FLI1 JASPAR yes 118470527
chr1 226230525 226230535 ELK1 JASPAR yes 118470528
chr1 226230525 226230535 ELK3 JASPAR yes 118470529
chr1 226230525 226230535 ERF JASPAR yes 118470530
chr1 226230525 226230535 ERG JASPAR yes 118470531
chr1 226230525 226230535 ETS1 JASPAR yes 118470532
chr1 226230525 226230535 ETV1 JASPAR yes 118470533
chr1 226230525 226230535 ETV3 JASPAR yes 118470534
chr1 226230525 226230535 ETV4 JASPAR yes 118470535
chr1 226230525 226230535 ETV5 JASPAR yes 118470536
chr1 226230525 226230535 FEV JASPAR yes 118470537
chr1 226230525 226230535 FLI1 JASPAR yes 118470538
chr1 226230525 226230536 ETV2 JASPAR yes 118470539
chr1 226230525 226230536 SPDEF JASPAR yes 118470540
chr1 226230525 226230537 ELF1 JASPAR yes 118470541
chr1 226230526 226230535 ELK4 JASPAR yes 118470542
chr1 226230538 226230544 SOX10 JASPAR yes 118470543
chr1 226230558 226230564 MZF1 JASPAR yes 118470544
SNP sites on vista5342[chr1:226230458-226230596]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226230472 rs201343925 TTTGG T no 989446
chr1 226230541 rs559135903 T C
SOX10
989447
Genes possibly regulated by vista5342[chr1:226230458-226230596]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226170403 226187032 - SDE2 ENSG00000143751.9 226187032 0.67 0.99 1895 56574
chr1 226249552 226259702 + H3F3A ENSG00000163041.5 226249552 0.89 0.84 1896 81044
Expression level of Genes
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miRNAs possibly regulated by vista5342[chr1:226230458-226230596]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results