EnhancerDB
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  3. vista5344[chr1:226288544-226288864]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5344[chr1:226288544-226288864]
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Tissue distribution of vista5344
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Transcription factor that possibly regulate vista5344[chr1:226288544-226288864]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226288545 226288549 H4TF2 TRANSFAC yes 35790523
chr1 226288545 226288549 H4TF2 TRANSFAC yes 118470580
chr1 226288558 226288572 RORA JASPAR yes 35790524
chr1 226288558 226288572 RORA JASPAR yes 118470581
chr1 226288585 226288606 IRF1 JASPAR yes 35790525
chr1 226288585 226288606 IRF1 JASPAR yes 118470582
chr1 226288587 226288608 IRF1 JASPAR yes 35790526
chr1 226288587 226288608 IRF1 JASPAR yes 118470583
chr1 226288588 226288603 FOXP1 JASPAR yes 35790527
chr1 226288588 226288603 FOXP1 JASPAR yes 118470584
chr1 226288590 226288605 FOXP1 JASPAR yes 35790528
chr1 226288590 226288605 FOXP1 JASPAR yes 118470585
chr1 226288591 226288612 IRF1 JASPAR yes 35790529
chr1 226288591 226288612 IRF1 JASPAR yes 118470586
chr1 226288592 226288607 FOXP1 JASPAR yes 35790530
chr1 226288592 226288607 FOXP1 JASPAR yes 118470587
chr1 226288592 226288613 IRF1 JASPAR yes 35790531
chr1 226288592 226288613 IRF1 JASPAR yes 118470588
chr1 226288593 226288614 IRF1 JASPAR yes 35790532
chr1 226288593 226288614 IRF1 JASPAR yes 118470589
chr1 226288595 226288616 IRF1 JASPAR yes 35790533
chr1 226288595 226288616 IRF1 JASPAR yes 118470590
chr1 226288597 226288612 FOXP1 JASPAR yes 35790534
chr1 226288597 226288612 FOXP1 JASPAR yes 118470591
chr1 226288598 226288613 FOXP1 JASPAR yes 35790535
chr1 226288598 226288613 FOXP1 JASPAR yes 118470592
chr1 226288599 226288620 IRF1 JASPAR yes 35790536
chr1 226288599 226288620 IRF1 JASPAR yes 118470593
chr1 226288600 226288615 FOXP1 JASPAR yes 35790537
chr1 226288600 226288615 FOXP1 JASPAR yes 118470594
chr1 226288601 226288622 IRF1 JASPAR yes 35790538
chr1 226288601 226288622 IRF1 JASPAR yes 118470595
chr1 226288605 226288620 FOXP1 JASPAR yes 35790539
chr1 226288605 226288620 FOXP1 JASPAR yes 118470596
chr1 226288606 226288627 IRF1 JASPAR yes 35790540
chr1 226288606 226288627 IRF1 JASPAR yes 118470597
chr1 226288607 226288622 FOXP1 JASPAR yes 35790541
chr1 226288607 226288622 FOXP1 JASPAR yes 118470598
chr1 226288608 226288623 IRF9 JASPAR yes 35790542
chr1 226288608 226288623 IRF9 JASPAR yes 118470599
chr1 226288610 226288624 STAT1 JASPAR yes 35790543
chr1 226288610 226288624 STAT1 JASPAR yes 118470600
chr1 226288610 226288625 PRDM1 JASPAR yes 35790544
chr1 226288610 226288625 STAT2 JASPAR yes 35790545
chr1 226288610 226288625 PRDM1 JASPAR yes 118470601
chr1 226288610 226288625 STAT2 JASPAR yes 118470602
chr1 226288610 226288628 IRF2 JASPAR yes 35790546
chr1 226288610 226288628 IRF2 JASPAR yes 118470603
chr1 226288615 226288629 IRF7 JASPAR yes 35790547
chr1 226288615 226288629 IRF7 JASPAR yes 118470604
chr1 226288625 226288636 DUX4 JASPAR yes 35790548
chr1 226288625 226288636 PHOX2A JASPAR yes 35790549
chr1 226288625 226288636 PROP1 JASPAR yes 35790550
chr1 226288625 226288636 DUX4 JASPAR yes 118470605
chr1 226288625 226288636 PHOX2A JASPAR yes 118470606
chr1 226288625 226288636 PROP1 JASPAR yes 118470607
chr1 226288628 226288638 ALX3 JASPAR yes 35790551
chr1 226288628 226288638 ALX3 JASPAR yes 118470608
chr1 226288629 226288633 H1TF2 TRANSFAC yes 35790552
chr1 226288629 226288633 NFE TRANSFAC yes 35790553
chr1 226288629 226288633 SRF TRANSFAC yes 35790554
chr1 226288629 226288633 H1TF2 TRANSFAC yes 118470609
chr1 226288629 226288633 NFE TRANSFAC yes 118470610
chr1 226288629 226288633 SRF TRANSFAC yes 118470611
chr1 226288629 226288637 BSX JASPAR yes 35790555
chr1 226288629 226288637 DLX6 JASPAR yes 35790556
chr1 226288629 226288637 MSX1 JASPAR yes 35790557
chr1 226288629 226288637 MSX2 JASPAR yes 35790558
chr1 226288629 226288637 BSX JASPAR yes 118470612
chr1 226288629 226288637 DLX6 JASPAR yes 118470613
chr1 226288629 226288637 MSX1 JASPAR yes 118470614
chr1 226288629 226288637 MSX2 JASPAR yes 118470615
chr1 226288644 226288654 HOXC10 JASPAR yes 35790559
chr1 226288644 226288654 HOXD11 JASPAR yes 35790560
chr1 226288644 226288654 HOXC10 JASPAR yes 118470616
chr1 226288644 226288654 HOXD11 JASPAR yes 118470617
chr1 226288644 226288655 HOXC11 JASPAR yes 35790561
chr1 226288644 226288655 HOXC11 JASPAR yes 118470618
chr1 226288645 226288654 CDX1 JASPAR yes 35790562
chr1 226288645 226288654 CDX1 JASPAR yes 118470619
chr1 226288645 226288656 CDX2 JASPAR yes 35790563
chr1 226288645 226288656 CDX2 JASPAR yes 118470620
chr1 226288652 226288658 SOX10 JASPAR yes 35790564
chr1 226288652 226288658 SOX10 JASPAR yes 118470621
chr1 226288660 226288672 MEF2D JASPAR yes 35790565
chr1 226288660 226288672 MEF2D JASPAR yes 118470622
chr1 226288662 226288666 TEAD2 TRANSFAC yes 35790566
chr1 226288662 226288666 TEAD2 TRANSFAC yes 118470623
chr1 226288662 226288667 TBP TRANSFAC yes 35790567
chr1 226288662 226288667 TBP TRANSFAC yes 118470624
chr1 226288662 226288668 TMF TRANSFAC yes 35790568
chr1 226288662 226288668 TMF TRANSFAC yes 118470625
chr1 226288729 226288744 JUND JASPAR yes 35790569
chr1 226288729 226288744 JUND JASPAR yes 118470626
chr1 226288730 226288743 JUN JASPAR yes 35790570
chr1 226288730 226288743 JUN JASPAR yes 118470627
chr1 226288731 226288745 ATF7 JASPAR yes 35790571
chr1 226288731 226288745 BATF3 JASPAR yes 35790572
chr1 226288731 226288745 ATF7 JASPAR yes 118470628
chr1 226288731 226288745 BATF3 JASPAR yes 118470629
chr1 226288732 226288744 JDP2 JASPAR yes 35790573
chr1 226288732 226288744 JDP2 JASPAR yes 118470630
chr1 226288766 226288770 H1TF2 TRANSFAC yes 35790574
chr1 226288766 226288770 NFE TRANSFAC yes 35790575
chr1 226288766 226288770 SRF TRANSFAC yes 35790576
chr1 226288766 226288770 H1TF2 TRANSFAC yes 118470631
chr1 226288766 226288770 NFE TRANSFAC yes 118470632
chr1 226288766 226288770 SRF TRANSFAC yes 118470633
chr1 226288772 226288776 YY1 TRANSFAC yes 35790577
chr1 226288772 226288776 YY1 TRANSFAC yes 118470634
chr1 226288777 226288787 BHLHE40 JASPAR yes 35790578
chr1 226288777 226288787 BHLHE41 JASPAR yes 35790579
chr1 226288777 226288787 MAX JASPAR yes 35790580
chr1 226288777 226288787 MLXIPL JASPAR yes 35790581
chr1 226288777 226288787 SREBF2 JASPAR yes 35790582
chr1 226288777 226288787 TFE3 JASPAR yes 35790583
chr1 226288777 226288787 TFEC JASPAR yes 35790584
chr1 226288777 226288787 BHLHE40 JASPAR yes 118470635
chr1 226288777 226288787 BHLHE41 JASPAR yes 118470636
chr1 226288777 226288787 MAX JASPAR yes 118470637
chr1 226288777 226288787 MLXIPL JASPAR yes 118470638
chr1 226288777 226288787 SREBF2 JASPAR yes 118470639
chr1 226288777 226288787 TFE3 JASPAR yes 118470640
chr1 226288777 226288787 TFEC JASPAR yes 118470641
chr1 226288778 226288788 MAX JASPAR yes 35790585
chr1 226288778 226288788 MAX JASPAR yes 118470642
chr1 226288779 226288784 MYC TRANSFAC yes 35790586
chr1 226288779 226288784 USF1 TRANSFAC yes 35790587
chr1 226288779 226288784 USF2 TRANSFAC yes 35790588
chr1 226288779 226288784 MYC TRANSFAC yes 118470643
chr1 226288779 226288784 USF1 TRANSFAC yes 118470644
chr1 226288779 226288784 USF2 TRANSFAC yes 118470645
chr1 226288781 226288795 FOXF2 JASPAR yes 35790589
chr1 226288781 226288795 FOXF2 JASPAR yes 118470646
chr1 226288781 226288797 RFX2 JASPAR yes 35790590
chr1 226288781 226288797 RFX2 JASPAR yes 118470647
chr1 226288782 226288790 FOXG1 JASPAR yes 35790591
chr1 226288782 226288790 FOXG1 JASPAR yes 118470648
chr1 226288787 226288799 CREB1 JASPAR yes 35790592
chr1 226288787 226288799 CREB1 JASPAR yes 118470649
chr1 226288797 226288812 FOXP1 JASPAR yes 35790593
chr1 226288797 226288812 FOXP1 JASPAR yes 118470650
chr1 226288800 226288811 FOXP2 JASPAR yes 35790594
chr1 226288800 226288811 FOXP2 JASPAR yes 118470651
chr1 226288801 226288809 FOXO3 JASPAR yes 35790595
chr1 226288801 226288809 FOXO3 JASPAR yes 118470652
chr1 226288802 226288809 FOXD2 JASPAR yes 35790596
chr1 226288802 226288809 FOXI1 JASPAR yes 35790597
chr1 226288802 226288809 FOXL1 JASPAR yes 35790598
chr1 226288802 226288809 FOXO4 JASPAR yes 35790599
chr1 226288802 226288809 FOXO6 JASPAR yes 35790600
chr1 226288802 226288809 FOXP3 JASPAR yes 35790601
chr1 226288802 226288809 FOXD2 JASPAR yes 118470653
chr1 226288802 226288809 FOXI1 JASPAR yes 118470654
chr1 226288802 226288809 FOXL1 JASPAR yes 118470655
chr1 226288802 226288809 FOXO4 JASPAR yes 118470656
chr1 226288802 226288809 FOXO6 JASPAR yes 118470657
chr1 226288802 226288809 FOXP3 JASPAR yes 118470658
chr1 226288802 226288810 FOXD1 JASPAR yes 35790602
chr1 226288802 226288810 FOXG1 JASPAR yes 35790603
chr1 226288802 226288810 FOXO3 JASPAR yes 35790604
chr1 226288802 226288810 FOXD1 JASPAR yes 118470659
chr1 226288802 226288810 FOXG1 JASPAR yes 118470660
chr1 226288802 226288810 FOXO3 JASPAR yes 118470661
chr1 226288802 226288811 SRY JASPAR yes 35790605
chr1 226288802 226288811 SRY JASPAR yes 118470662
chr1 226288830 226288834 TEAD2 TRANSFAC yes 35790606
chr1 226288830 226288834 TEAD2 TRANSFAC yes 118470663
chr1 226288830 226288835 TBP TRANSFAC yes 35790607
chr1 226288830 226288835 TBP TRANSFAC yes 118470664
chr1 226288830 226288836 TFIID TRANSFAC yes 35790608
chr1 226288830 226288836 TFIID TRANSFAC yes 118470665
chr1 226288849 226288853 H4TF2 TRANSFAC yes 35790609
chr1 226288849 226288853 H4TF2 TRANSFAC yes 118470666
chr1 226288851 226288857 MZF1 JASPAR yes 35790610
chr1 226288851 226288857 MZF1 JASPAR yes 118470667
chr1 226288861 226288867 ZNF354C JASPAR yes 35790611
chr1 226288861 226288867 ZNF354C JASPAR yes 118470668
SNP sites on vista5344[chr1:226288544-226288864]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226288597 rs148687506 A AG
FOXP1 IRF1
989723
chr1 226288612 rs139362362 A G
FOXP1 IRF1 IRF2 IRF9 PRDM1 STAT1 STAT2
989724
chr1 226288723 rs116311849 C G no 989725
chr1 226288726 rs77588684 A G no 989726
chr1 226288789 rs531577928 A C
CREB1 FOXF2 FOXG1 RFX2
989727
Genes possibly regulated by vista5344[chr1:226288544-226288864]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226249552 226259702 + H3F3A ENSG00000163041.5 226249552 0.89 0.84 1896 61008
chr1 226332380 226374431 - ACBD3 ENSG00000182827.8 226374431 0.61 0.99 1897 14433
Expression level of Genes
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miRNAs possibly regulated by vista5344[chr1:226288544-226288864]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results