EnhancerDB
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  3. vista5346[chr1:226298813-226299157]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5346[chr1:226298813-226299157]
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Tissue distribution of vista5346
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Transcription factor that possibly regulate vista5346[chr1:226298813-226299157]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226297414 226299464 POLR2A UCSC Txn Factor no Conserved 107875450
chr1 226297414 226299464 POLR2A UCSC Txn Factor no Conserved 107875451
chr1 226298499 226299224 GATA2 UCSC Txn Factor no Conserved 107875504
chr1 226298748 226299204 JUND UCSC Txn Factor no Conserved 107875515
chr1 226298780 226299213 TEAD4 UCSC Txn Factor no Conserved 107875521
chr1 226298814 226299194 TAL1 UCSC Txn Factor no Conserved 107875529
chr1 226298826 226299215 NR2F2 UCSC Txn Factor no Conserved 107875531
chr1 226298830 226299230 TBL1XR1 UCSC Txn Factor no Conserved 107875533
chr1 226298838 226299349 REST UCSC Txn Factor no Conserved 107875535
chr1 226298845 226299164 PML UCSC Txn Factor no Conserved 107875538
chr1 226298874 226299154 MEF2A UCSC Txn Factor no Conserved 107875547
chr1 226298937 226299100 TRIM28 UCSC Txn Factor no Conserved 107875556
chr1 226298938 226299140 EP300 UCSC Txn Factor no Conserved 107875558
chr1 226298942 226299085 STAT5A UCSC Txn Factor no Conserved 107875559
chr1 226298814 226298825 PHOX2A JASPAR yes 35791740
chr1 226298814 226298825 PROP1 JASPAR yes 35791741
chr1 226298814 226298825 PHOX2A JASPAR yes 118470771
chr1 226298814 226298825 PROP1 JASPAR yes 118470772
chr1 226298817 226298832 SOX21 JASPAR yes 35791742
chr1 226298817 226298832 SOX21 JASPAR yes 118470773
chr1 226298830 226298841 RUNX1 JASPAR yes 35791743
chr1 226298830 226298841 RUNX1 JASPAR yes 118470774
chr1 226298851 226298867 GLIS1 JASPAR yes 35791744
chr1 226298851 226298867 GLIS1 JASPAR yes 118470775
chr1 226298852 226298862 ZNF740 JASPAR yes 35791745
chr1 226298852 226298862 ZNF740 JASPAR yes 118470776
chr1 226298855 226298874 CTCF JASPAR yes 35791746
chr1 226298855 226298874 CTCF JASPAR yes 118470777
chr1 226298903 226298908 SP1 TRANSFAC yes 35791747
chr1 226298903 226298908 SP1 TRANSFAC yes 118470778
chr1 226298936 226298942 MZF1 JASPAR yes 35791748
chr1 226298936 226298942 MZF1 JASPAR yes 118470779
chr1 226298973 226298986 ZBTB18 JASPAR yes 35791749
chr1 226298973 226298986 ZBTB18 JASPAR yes 118470780
chr1 226298992 226298996 YY1 TRANSFAC yes 35791750
chr1 226298992 226298996 YY1 TRANSFAC yes 118470781
chr1 226299005 226299020 MEF2A JASPAR yes 35791751
chr1 226299005 226299020 MEF2A JASPAR yes 118470782
chr1 226299006 226299021 MEF2C JASPAR yes 35791752
chr1 226299006 226299021 MEF2C JASPAR yes 118470783
chr1 226299007 226299019 MEF2A JASPAR yes 35791753
chr1 226299007 226299019 MEF2B JASPAR yes 35791754
chr1 226299007 226299019 MEF2D JASPAR yes 35791755
chr1 226299007 226299019 MEF2A JASPAR yes 118470784
chr1 226299007 226299019 MEF2B JASPAR yes 118470785
chr1 226299007 226299019 MEF2D JASPAR yes 118470786
chr1 226299008 226299018 MEF2A JASPAR yes 35791756
chr1 226299008 226299018 MEF2A JASPAR yes 118470787
chr1 226299009 226299013 YY1 TRANSFAC yes 35791757
chr1 226299009 226299013 YY1 TRANSFAC yes 118470788
chr1 226299011 226299024 EOMES JASPAR yes 35791758
chr1 226299011 226299024 EOMES JASPAR yes 118470789
chr1 226299013 226299023 TBR1 JASPAR yes 35791759
chr1 226299013 226299023 TBR1 JASPAR yes 118470790
chr1 226299013 226299024 TBX20 JASPAR yes 35791760
chr1 226299013 226299024 TBX2 JASPAR yes 35791761
chr1 226299013 226299024 TBX20 JASPAR yes 118470791
chr1 226299013 226299024 TBX2 JASPAR yes 118470792
chr1 226299015 226299018 MYB TRANSFAC yes 35791762
chr1 226299015 226299018 MYB TRANSFAC yes 118470793
chr1 226299022 226299032 ID4 JASPAR yes 35791763
chr1 226299022 226299032 TCF3 JASPAR yes 35791764
chr1 226299022 226299032 TCF4 JASPAR yes 35791765
chr1 226299022 226299032 ID4 JASPAR yes 118470794
chr1 226299022 226299032 TCF3 JASPAR yes 118470795
chr1 226299022 226299032 TCF4 JASPAR yes 118470796
chr1 226299027 226299043 POU4F2 JASPAR yes 35791766
chr1 226299027 226299043 POU4F2 JASPAR yes 118470797
chr1 226299029 226299041 FOXI1 JASPAR yes 35791767
chr1 226299029 226299041 FOXI1 JASPAR yes 118470798
chr1 226299031 226299042 FOXB1 JASPAR yes 35791768
chr1 226299031 226299042 FOXC1 JASPAR yes 35791769
chr1 226299031 226299042 FOXB1 JASPAR yes 118470799
chr1 226299031 226299042 FOXC1 JASPAR yes 118470800
chr1 226299032 226299036 YY1 TRANSFAC yes 35791770
chr1 226299032 226299036 YY1 TRANSFAC yes 118470801
chr1 226299037 226299045 GATA3 JASPAR yes 35791771
chr1 226299037 226299045 GATA3 JASPAR yes 118470802
chr1 226299046 226299050 YY1 TRANSFAC yes 35791772
chr1 226299046 226299050 YY1 TRANSFAC yes 118470803
chr1 226299055 226299060 MYC TRANSFAC yes 35791773
chr1 226299055 226299060 MYC TRANSFAC yes 118470804
chr1 226299076 226299088 GLI2 JASPAR yes 35791774
chr1 226299076 226299088 GLI2 JASPAR yes 118470805
chr1 226299096 226299112 SOX4 JASPAR yes 35791775
chr1 226299096 226299112 SOX4 JASPAR yes 118470806
chr1 226299097 226299106 NKX2-8 JASPAR yes 35791776
chr1 226299097 226299106 NKX2-8 JASPAR yes 118470807
chr1 226299110 226299113 MYB TRANSFAC yes 35791777
chr1 226299110 226299113 MYB TRANSFAC yes 118470808
chr1 226299112 226299127 RFX5 JASPAR yes 35791778
chr1 226299112 226299127 TFAP2C JASPAR yes 35791779
chr1 226299112 226299127 RFX5 JASPAR yes 118470809
chr1 226299112 226299127 TFAP2C JASPAR yes 118470810
chr1 226299113 226299117 NFE TRANSFAC yes 35791780
chr1 226299113 226299117 NFE TRANSFAC yes 118470811
chr1 226299114 226299128 EBF1 JASPAR yes 35791781
chr1 226299114 226299128 EBF1 JASPAR yes 118470812
chr1 226299115 226299126 EBF1 JASPAR yes 35791782
chr1 226299115 226299126 EBF1 JASPAR yes 118470813
chr1 226299115 226299129 EBF1 JASPAR yes 35791783
chr1 226299115 226299129 EBF1 JASPAR yes 118470814
chr1 226299116 226299122 MZF1 JASPAR yes 35791784
chr1 226299116 226299122 MZF1 JASPAR yes 118470815
chr1 226299117 226299128 EBF1 JASPAR yes 35791785
chr1 226299117 226299128 EBF1 JASPAR yes 118470816
chr1 226299124 226299129 GATA2 JASPAR yes 35791786
chr1 226299124 226299129 GATA2 JASPAR yes 118470817
SNP sites on vista5346[chr1:226298813-226299157]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226298835 rs76273055 G A
GATA2 JUND NR2F2 POLR2A RUNX1 TAL1 TBL1XR1 TEAD4
989833
chr1 226298919 rs372106341 G C
GATA2 JUND MEF2A NR2F2 PML POLR2A REST TAL1 TBL1XR1 TEAD4
989834
chr1 226299077 rs563958523 G T
EP300 GATA2 GLI2 JUND MEF2A NR2F2 PML POLR2A REST STAT5A TAL1 TBL1XR1 TEAD4 TRIM28
989835
Genes possibly regulated by vista5346[chr1:226298813-226299157]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226249552 226259702 + H3F3A ENSG00000163041.5 226249552 0.89 0.84 1896 50739
chr1 226332380 226374431 - ACBD3 ENSG00000182827.8 226374431 0.61 0.99 1897 24726
Expression level of Genes
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miRNAs possibly regulated by vista5346[chr1:226298813-226299157]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results