EnhancerDB
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  3. vista5347[chr1:226315308-226315548]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5347[chr1:226315308-226315548]
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Tissue distribution of vista5347
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Transcription factor that possibly regulate vista5347[chr1:226315308-226315548]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226315310 226316193 POLR2A UCSC Txn Factor no Conserved 107875584
chr1 226315310 226316193 POLR2A UCSC Txn Factor no Conserved 107875585
chr1 226315299 226315316 BCL6B JASPAR yes 35793662
chr1 226315299 226315316 BCL6B JASPAR yes 118470818
chr1 226315308 226315323 FOXP1 JASPAR yes 35793663
chr1 226315308 226315323 FOXP1 JASPAR yes 118470819
chr1 226315309 226315324 FOXP1 JASPAR yes 35793664
chr1 226315309 226315324 FOXP1 JASPAR yes 118470820
chr1 226315309 226315330 IRF1 JASPAR yes 35793665
chr1 226315309 226315330 IRF1 JASPAR yes 118470821
chr1 226315310 226315325 FOXP1 JASPAR yes 35793666
chr1 226315310 226315325 FOXP1 JASPAR yes 118470822
chr1 226315312 226315327 FOXP1 JASPAR yes 35793667
chr1 226315312 226315327 FOXP1 JASPAR yes 118470823
chr1 226315313 226315334 IRF1 JASPAR yes 35793668
chr1 226315313 226315334 IRF1 JASPAR yes 118470824
chr1 226315314 226315329 FOXP1 JASPAR yes 35793669
chr1 226315314 226315329 FOXP1 JASPAR yes 118470825
chr1 226315314 226315335 IRF1 JASPAR yes 35793670
chr1 226315314 226315335 IRF1 JASPAR yes 118470826
chr1 226315315 226315336 IRF1 JASPAR yes 35793671
chr1 226315315 226315336 IRF1 JASPAR yes 118470827
chr1 226315318 226315339 IRF1 JASPAR yes 35793672
chr1 226315318 226315339 IRF1 JASPAR yes 118470828
chr1 226315319 226315334 FOXP1 JASPAR yes 35793673
chr1 226315319 226315334 FOXP1 JASPAR yes 118470829
chr1 226315322 226315343 IRF1 JASPAR yes 35793674
chr1 226315322 226315343 IRF1 JASPAR yes 118470830
chr1 226315323 226315338 FOXP1 JASPAR yes 35793675
chr1 226315323 226315338 FOXP1 JASPAR yes 118470831
chr1 226315327 226315342 STAT2 JASPAR yes 35793676
chr1 226315327 226315342 STAT2 JASPAR yes 118470832
chr1 226315328 226315343 FOXP1 JASPAR yes 35793677
chr1 226315328 226315343 FOXP1 JASPAR yes 118470833
chr1 226315329 226315340 FOXA1 JASPAR yes 35793678
chr1 226315329 226315340 FOXA1 JASPAR yes 118470834
chr1 226315330 226315342 FOXC2 JASPAR yes 35793679
chr1 226315330 226315342 FOXC2 JASPAR yes 118470835
chr1 226315330 226315350 RREB1 JASPAR yes 35793680
chr1 226315330 226315350 RREB1 JASPAR yes 118470836
chr1 226315331 226315342 FOXP2 JASPAR yes 35793681
chr1 226315331 226315342 FOXP2 JASPAR yes 118470837
chr1 226315334 226315354 RREB1 JASPAR yes 35793682
chr1 226315334 226315354 RREB1 JASPAR yes 118470838
chr1 226315335 226315341 HiNF-A TRANSFAC yes 35793683
chr1 226315335 226315341 HiNF-A TRANSFAC yes 118470839
chr1 226315354 226315370 ZNF143 JASPAR yes 35793684
chr1 226315354 226315370 ZNF143 JASPAR yes 118470840
chr1 226315400 226315410 ID4 JASPAR yes 35793685
chr1 226315400 226315410 ID4 JASPAR yes 118470841
chr1 226315402 226315407 USF2 TRANSFAC yes 35793686
chr1 226315402 226315407 USF2 TRANSFAC yes 118470842
chr1 226315406 226315411 TFAP2A TRANSFAC yes 35793687
chr1 226315406 226315411 TFAP2A TRANSFAC yes 118470843
chr1 226315406 226315412 MZF1 JASPAR yes 35793688
chr1 226315406 226315412 MZF1 JASPAR yes 118470844
chr1 226315419 226315425 HiNF-A TRANSFAC yes 35793689
chr1 226315419 226315425 HiNF-A TRANSFAC yes 118470845
chr1 226315426 226315432 YY1 JASPAR yes 35793690
chr1 226315426 226315432 YY1 JASPAR yes 118470846
chr1 226315462 226315466 H4TF2 TRANSFAC yes 35793691
chr1 226315462 226315466 H4TF2 TRANSFAC yes 118470847
chr1 226315469 226315474 SP1 TRANSFAC yes 35793692
chr1 226315469 226315474 SP1 TRANSFAC yes 118470848
chr1 226315474 226315478 H4TF2 TRANSFAC yes 35793693
chr1 226315474 226315478 H4TF2 TRANSFAC yes 118470849
chr1 226315480 226315493 POU2F2 JASPAR yes 35793694
chr1 226315480 226315493 POU2F2 JASPAR yes 118470850
chr1 226315480 226315494 POU1F1 JASPAR yes 35793695
chr1 226315480 226315494 POU1F1 JASPAR yes 118470851
chr1 226315481 226315493 POU3F1 JASPAR yes 35793696
chr1 226315481 226315493 POU3F2 JASPAR yes 35793697
chr1 226315481 226315493 POU3F1 JASPAR yes 118470852
chr1 226315481 226315493 POU3F2 JASPAR yes 118470853
chr1 226315481 226315494 POU3F3 JASPAR yes 35793698
chr1 226315481 226315494 POU3F3 JASPAR yes 118470854
chr1 226315482 226315494 POU2F1 JASPAR yes 35793699
chr1 226315482 226315494 POU2F1 JASPAR yes 118470855
chr1 226315483 226315490 POU2F1 TRANSFAC yes 35793700
chr1 226315483 226315490 POU2F2C TRANSFAC yes 35793701
chr1 226315483 226315490 POU2F2 TRANSFAC yes 35793702
chr1 226315483 226315490 POU2F1 TRANSFAC yes 118470856
chr1 226315483 226315490 POU2F2C TRANSFAC yes 118470857
chr1 226315483 226315490 POU2F2 TRANSFAC yes 118470858
chr1 226315483 226315491 POU2F1 TRANSFAC yes 35793703
chr1 226315483 226315491 POU2F1 TRANSFAC yes 118470859
chr1 226315483 226315492 POU3F4 JASPAR yes 35793704
chr1 226315483 226315492 POU5F1B JASPAR yes 35793705
chr1 226315483 226315492 POU3F4 JASPAR yes 118470860
chr1 226315483 226315492 POU5F1B JASPAR yes 118470861
chr1 226315488 226315492 YY1 TRANSFAC yes 35793706
chr1 226315488 226315492 YY1 TRANSFAC yes 118470862
chr1 226315494 226315497 MYB TRANSFAC yes 35793707
chr1 226315494 226315497 MYB TRANSFAC yes 118470863
chr1 226315532 226315537 SP1 TRANSFAC yes 35793708
chr1 226315532 226315537 SP1 TRANSFAC yes 118470864
chr1 226315537 226315552 HSF1 JASPAR yes 35793709
chr1 226315537 226315552 HSF1 JASPAR yes 118470865
chr1 226315538 226315551 HSF1 JASPAR yes 35793710
chr1 226315538 226315551 HSF2 JASPAR yes 35793711
chr1 226315538 226315551 HSF4 JASPAR yes 35793712
chr1 226315538 226315551 HSF1 JASPAR yes 118470866
chr1 226315538 226315551 HSF2 JASPAR yes 118470867
chr1 226315538 226315551 HSF4 JASPAR yes 118470868
SNP sites on vista5347[chr1:226315308-226315548]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226315321 rs531678121 A AG
FOXP1 IRF1 POLR2A
989962
chr1 226315337 rs369787952 AAC A
FOXA1 FOXC2 FOXP1 FOXP2 HiNF-A IRF1 POLR2A RREB1 STAT2
989963
chr1 226315337 rs71168967 AAC A
FOXA1 FOXC2 FOXP1 FOXP2 HiNF-A IRF1 POLR2A RREB1 STAT2
989964
Genes possibly regulated by vista5347[chr1:226315308-226315548]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226249552 226259702 + H3F3A ENSG00000163041.5 226249552 0.89 0.84 1896 34244
chr1 226332380 226374431 - ACBD3 ENSG00000182827.8 226374431 0.61 0.99 1897 41117
chr1 226411319 226414755 + MIXL1 ENSG00000185155.7 226411319 0.95 0.98 1898 4229
Expression level of Genes
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miRNAs possibly regulated by vista5347[chr1:226315308-226315548]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results