EnhancerDB
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  3. vista5348[chr1:226315631-226315825]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5348[chr1:226315631-226315825]
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Tissue distribution of vista5348
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Transcription factor that possibly regulate vista5348[chr1:226315631-226315825]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226315310 226316193 POLR2A UCSC Txn Factor no Conserved 107875584
chr1 226315310 226316193 POLR2A UCSC Txn Factor no Conserved 107875585
chr1 226315586 226315952 STAT3 UCSC Txn Factor no Conserved 107875615
chr1 226315651 226316087 ELF1 UCSC Txn Factor no Conserved 107875626
chr1 226315765 226315957 E2F1 UCSC Txn Factor no Conserved 107875642
chr1 226315637 226315648 ELK4 JASPAR yes 35793716
chr1 226315637 226315648 FLI1 JASPAR yes 35793717
chr1 226315637 226315648 ELK4 JASPAR yes 118470869
chr1 226315637 226315648 FLI1 JASPAR yes 118470870
chr1 226315651 226315666 HNF4G JASPAR yes 35793718
chr1 226315651 226315666 NR2C2 JASPAR yes 35793719
chr1 226315651 226315666 HNF4G JASPAR yes 118470871
chr1 226315651 226315666 NR2C2 JASPAR yes 118470872
chr1 226315651 226315669 ESR2 JASPAR yes 35793720
chr1 226315651 226315669 ESR2 JASPAR yes 118470873
chr1 226315652 226315667 HNF4A JASPAR yes 35793721
chr1 226315652 226315667 HNF4A JASPAR yes 118470874
chr1 226315654 226315658 ESR1 TRANSFAC yes 35793722
chr1 226315654 226315658 ESR1 TRANSFAC yes 118470875
chr1 226315672 226315684 HNF1B JASPAR yes 35793723
chr1 226315672 226315684 HNF1B JASPAR yes 118470876
chr1 226315692 226315702 GABPA JASPAR yes 35793724
chr1 226315692 226315702 GABPA JASPAR yes 118470877
chr1 226315694 226315705 STAT1 JASPAR yes 35793725
chr1 226315694 226315705 STAT3 JASPAR yes 35793726
chr1 226315694 226315705 STAT1 JASPAR yes 118470878
chr1 226315694 226315705 STAT3 JASPAR yes 118470879
chr1 226315706 226315716 SP1 JASPAR yes 35793727
chr1 226315706 226315716 SP1 JASPAR yes 118470880
chr1 226315710 226315725 RFX5 JASPAR yes 35793728
chr1 226315710 226315725 RFX5 JASPAR yes 118470881
chr1 226315712 226315728 RFX2 JASPAR yes 35793729
chr1 226315712 226315728 RFX3 JASPAR yes 35793730
chr1 226315712 226315728 RFX4 JASPAR yes 35793731
chr1 226315712 226315728 RFX5 JASPAR yes 35793732
chr1 226315712 226315728 RFX2 JASPAR yes 118470882
chr1 226315712 226315728 RFX3 JASPAR yes 118470883
chr1 226315712 226315728 RFX4 JASPAR yes 118470884
chr1 226315712 226315728 RFX5 JASPAR yes 118470885
chr1 226315713 226315732 RFX2 JASPAR yes 35793733
chr1 226315713 226315732 RFX2 JASPAR yes 118470886
chr1 226315718 226315728 NFATC3 JASPAR yes 35793734
chr1 226315718 226315728 NFATC3 JASPAR yes 118470887
chr1 226315720 226315728 FOXO3 JASPAR yes 35793735
chr1 226315720 226315728 FOXO3 JASPAR yes 118470888
chr1 226315743 226315752 HIC2 JASPAR yes 35793736
chr1 226315743 226315752 HIC2 JASPAR yes 118470889
chr1 226315746 226315756 SP1 JASPAR yes 35793737
chr1 226315746 226315756 SP1 JASPAR yes 118470890
chr1 226315753 226315768 STAT1 JASPAR yes 35793738
chr1 226315753 226315768 STAT1 JASPAR yes 118470891
chr1 226315755 226315766 STAT1 JASPAR yes 35793739
chr1 226315755 226315766 STAT3 JASPAR yes 35793740
chr1 226315755 226315766 STAT1 JASPAR yes 118470892
chr1 226315755 226315766 STAT3 JASPAR yes 118470893
chr1 226315773 226315786 TFAP2A JASPAR yes 35793741
chr1 226315773 226315786 TFAP2B JASPAR yes 35793742
chr1 226315773 226315786 TFAP2C JASPAR yes 35793743
chr1 226315773 226315786 TFAP2A JASPAR yes 118470894
chr1 226315773 226315786 TFAP2B JASPAR yes 118470895
chr1 226315773 226315786 TFAP2C JASPAR yes 118470896
chr1 226315780 226315801 ZNF263 JASPAR yes 35793744
chr1 226315780 226315801 ZNF263 JASPAR yes 118470897
chr1 226315794 226315805 FOXA1 JASPAR yes 35793745
chr1 226315794 226315805 FOXA1 JASPAR yes 118470898
chr1 226315795 226315807 FOXC2 JASPAR yes 35793746
chr1 226315795 226315807 FOXC2 JASPAR yes 118470899
chr1 226315796 226315808 FOXI1 JASPAR yes 35793747
chr1 226315796 226315808 FOXI1 JASPAR yes 118470900
chr1 226315805 226315815 GABPA JASPAR yes 35793748
chr1 226315805 226315815 GABPA JASPAR yes 118470901
chr1 226315807 226315813 ETS1 JASPAR yes 35793749
chr1 226315807 226315813 SPI1 JASPAR yes 35793750
chr1 226315807 226315813 ETS1 JASPAR yes 118470902
chr1 226315807 226315813 SPI1 JASPAR yes 118470903
chr1 226315809 226315824 HNF4G JASPAR yes 35793751
chr1 226315809 226315824 HNF4G JASPAR yes 118470904
chr1 226315810 226315825 HNF4A JASPAR yes 35793752
chr1 226315810 226315825 HNF4A JASPAR yes 118470905
chr1 226315812 226315816 LFA1 TRANSFAC yes 35793753
chr1 226315812 226315816 LFA1 TRANSFAC yes 118470906
chr1 226315821 226315838 BCL6B JASPAR yes 35793754
chr1 226315821 226315838 BCL6B JASPAR yes 118470907
SNP sites on vista5348[chr1:226315631-226315825]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226315638 rs188187661 G C
ELK4 FLI1 POLR2A STAT3
989970
chr1 226315640 rs192287112 A T
ELK4 FLI1 POLR2A STAT3
989971
chr1 226315752 rs552633670 C A
ELF1 HIC2 POLR2A SP1 STAT3
989972
chr1 226315804 rs145820492 CAAACGG C
E2F1 ELF1 FOXA1 FOXC2 FOXI1 POLR2A STAT3
989973
chr1 226315804 rs376461825 CAAACGG C
E2F1 ELF1 FOXA1 FOXC2 FOXI1 POLR2A STAT3
989974
chr1 226315809 rs570845458 G A
E2F1 ELF1 ETS1 GABPA HNF4G POLR2A SPI1 STAT3
989975
chr1 226315816 rs535379215 C T
E2F1 ELF1 HNF4A HNF4G LFA1 POLR2A STAT3
989976
Genes possibly regulated by vista5348[chr1:226315631-226315825]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226249552 226259702 + H3F3A ENSG00000163041.5 226249552 0.89 0.84 1896 33921
chr1 226332380 226374431 - ACBD3 ENSG00000182827.8 226374431 0.61 0.99 1897 41394
chr1 226411319 226414755 + MIXL1 ENSG00000185155.7 226411319 0.95 0.98 1898 4506
Expression level of Genes
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miRNAs possibly regulated by vista5348[chr1:226315631-226315825]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results