EnhancerDB
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  3. vista53499[chr6:130774409-130774738]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53499[chr6:130774409-130774738]
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Tissue distribution of vista53499
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Transcription factor that possibly regulate vista53499[chr6:130774409-130774738]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 130774438 130774442 TEAD2 TRANSFAC yes 70434625
chr6 130774438 130774442 TEAD2 TRANSFAC yes 105186088
chr6 130774438 130774443 TBP TRANSFAC yes 70434626
chr6 130774438 130774443 TBP TRANSFAC yes 105186089
chr6 130774438 130774444 TFIID TRANSFAC yes 70434627
chr6 130774438 130774444 TFIID TRANSFAC yes 105186090
chr6 130774446 130774457 FOXA1 JASPAR yes 70434628
chr6 130774446 130774457 FOXA1 JASPAR yes 105186091
chr6 130774454 130774472 SRF JASPAR yes 70434629
chr6 130774454 130774472 SRF JASPAR yes 105186092
chr6 130774460 130774464 YY1 TRANSFAC yes 70434630
chr6 130774460 130774464 YY1 TRANSFAC yes 105186093
chr6 130774465 130774469 ESR1 TRANSFAC yes 70434631
chr6 130774465 130774469 ESR1 TRANSFAC yes 105186094
chr6 130774465 130774481 POU4F3 JASPAR yes 70434632
chr6 130774465 130774481 POU4F3 JASPAR yes 105186095
chr6 130774466 130774482 POU4F3 JASPAR yes 70434633
chr6 130774466 130774482 POU4F3 JASPAR yes 105186096
chr6 130774479 130774489 ELK1 JASPAR yes 70434634
chr6 130774479 130774489 ELK1 JASPAR yes 105186097
chr6 130774480 130774491 ETV2 JASPAR yes 70434635
chr6 130774480 130774491 ETV2 JASPAR yes 105186098
chr6 130774481 130774490 ELK4 JASPAR yes 70434636
chr6 130774481 130774490 ELK4 JASPAR yes 105186099
chr6 130774481 130774491 ELK1 JASPAR yes 70434637
chr6 130774481 130774491 ELK3 JASPAR yes 70434638
chr6 130774481 130774491 ERF JASPAR yes 70434639
chr6 130774481 130774491 ERG JASPAR yes 70434640
chr6 130774481 130774491 ETS1 JASPAR yes 70434641
chr6 130774481 130774491 ETV1 JASPAR yes 70434642
chr6 130774481 130774491 ETV3 JASPAR yes 70434643
chr6 130774481 130774491 ETV4 JASPAR yes 70434644
chr6 130774481 130774491 ETV5 JASPAR yes 70434645
chr6 130774481 130774491 ETV6 JASPAR yes 70434646
chr6 130774481 130774491 FEV JASPAR yes 70434647
chr6 130774481 130774491 FLI1 JASPAR yes 70434648
chr6 130774481 130774491 ELK1 JASPAR yes 105186100
chr6 130774481 130774491 ELK3 JASPAR yes 105186101
chr6 130774481 130774491 ERF JASPAR yes 105186102
chr6 130774481 130774491 ERG JASPAR yes 105186103
chr6 130774481 130774491 ETS1 JASPAR yes 105186104
chr6 130774481 130774491 ETV1 JASPAR yes 105186105
chr6 130774481 130774491 ETV3 JASPAR yes 105186106
chr6 130774481 130774491 ETV4 JASPAR yes 105186107
chr6 130774481 130774491 ETV5 JASPAR yes 105186108
chr6 130774481 130774491 ETV6 JASPAR yes 105186109
chr6 130774481 130774491 FEV JASPAR yes 105186110
chr6 130774481 130774491 FLI1 JASPAR yes 105186111
chr6 130774481 130774492 ELK4 JASPAR yes 70434649
chr6 130774481 130774492 FLI1 JASPAR yes 70434650
chr6 130774481 130774492 ELK4 JASPAR yes 105186112
chr6 130774481 130774492 FLI1 JASPAR yes 105186113
chr6 130774482 130774490 FEV JASPAR yes 70434651
chr6 130774482 130774490 FEV JASPAR yes 105186114
chr6 130774483 130774489 ETS1 JASPAR yes 70434652
chr6 130774483 130774489 ETS1 JASPAR yes 105186115
chr6 130774484 130774499 JUND JASPAR yes 70434653
chr6 130774484 130774499 JUND JASPAR yes 105186116
chr6 130774488 130774498 SREBF1 JASPAR yes 70434654
chr6 130774488 130774498 SREBF2 JASPAR yes 70434655
chr6 130774488 130774498 SREBF1 JASPAR yes 105186117
chr6 130774488 130774498 SREBF2 JASPAR yes 105186118
chr6 130774526 130774540 JUN JASPAR yes 70434656
chr6 130774526 130774540 JUN JASPAR yes 105186119
chr6 130774537 130774548 ESRRA JASPAR yes 70434657
chr6 130774537 130774548 ESRRA JASPAR yes 105186120
chr6 130774546 130774565 RFX2 JASPAR yes 70434658
chr6 130774546 130774565 RFX2 JASPAR yes 105186121
chr6 130774550 130774566 RFX2 JASPAR yes 70434659
chr6 130774550 130774566 RFX3 JASPAR yes 70434660
chr6 130774550 130774566 RFX4 JASPAR yes 70434661
chr6 130774550 130774566 RFX5 JASPAR yes 70434662
chr6 130774550 130774566 RFX2 JASPAR yes 105186122
chr6 130774550 130774566 RFX3 JASPAR yes 105186123
chr6 130774550 130774566 RFX4 JASPAR yes 105186124
chr6 130774550 130774566 RFX5 JASPAR yes 105186125
chr6 130774551 130774570 RFX2 JASPAR yes 70434663
chr6 130774551 130774570 RFX2 JASPAR yes 105186126
chr6 130774552 130774558 ETS1 JASPAR yes 70434664
chr6 130774552 130774558 ETS1 JASPAR yes 105186127
chr6 130774567 130774579 FOXI1 JASPAR yes 70434665
chr6 130774567 130774579 FOXI1 JASPAR yes 105186128
chr6 130774568 130774580 FOXC2 JASPAR yes 70434666
chr6 130774568 130774580 FOXC2 JASPAR yes 105186129
chr6 130774568 130774582 FOXF2 JASPAR yes 70434667
chr6 130774568 130774582 ONECUT2 JASPAR yes 70434668
chr6 130774568 130774582 ONECUT3 JASPAR yes 70434669
chr6 130774568 130774582 FOXF2 JASPAR yes 105186130
chr6 130774568 130774582 ONECUT2 JASPAR yes 105186131
chr6 130774568 130774582 ONECUT3 JASPAR yes 105186132
chr6 130774569 130774580 FOXB1 JASPAR yes 70434670
chr6 130774569 130774580 FOXC1 JASPAR yes 70434671
chr6 130774569 130774580 FOXB1 JASPAR yes 105186133
chr6 130774569 130774580 FOXC1 JASPAR yes 105186134
chr6 130774570 130774574 YY1 TRANSFAC yes 70434672
chr6 130774570 130774574 YY1 TRANSFAC yes 105186135
chr6 130774570 130774585 MEF2A JASPAR yes 70434673
chr6 130774570 130774585 MEF2A JASPAR yes 105186136
chr6 130774571 130774586 MEF2C JASPAR yes 70434674
chr6 130774571 130774586 MEF2C JASPAR yes 105186137
chr6 130774574 130774578 YY1 TRANSFAC yes 70434675
chr6 130774574 130774578 YY1 TRANSFAC yes 105186138
chr6 130774592 130774596 NFE TRANSFAC yes 70434676
chr6 130774592 130774596 NFE TRANSFAC yes 105186139
chr6 130774623 130774638 MAFK JASPAR yes 70434677
chr6 130774623 130774638 MAFK JASPAR yes 105186140
chr6 130774649 130774657 HOXA5 JASPAR yes 70434678
chr6 130774649 130774657 HOXA5 JASPAR yes 105186141
chr6 130774655 130774665 TBR1 JASPAR yes 70434679
chr6 130774655 130774665 TBR1 JASPAR yes 105186142
chr6 130774682 130774686 YY1 TRANSFAC yes 70434680
chr6 130774682 130774686 YY1 TRANSFAC yes 105186143
chr6 130774682 130774693 CEBPB JASPAR yes 70434681
chr6 130774682 130774693 CEBPB JASPAR yes 105186144
chr6 130774683 130774694 CEBPA JASPAR yes 70434682
chr6 130774683 130774694 CEBPA JASPAR yes 105186145
chr6 130774689 130774705 T JASPAR yes 70434683
chr6 130774689 130774705 T JASPAR yes 105186146
chr6 130774690 130774702 TEAD1 JASPAR yes 70434684
chr6 130774690 130774702 TEAD1 JASPAR yes 105186147
chr6 130774694 130774703 NKX2-8 JASPAR yes 70434685
chr6 130774694 130774703 NKX2-8 JASPAR yes 105186148
chr6 130774694 130774704 NKX2-3 JASPAR yes 70434686
chr6 130774694 130774704 NKX2-3 JASPAR yes 105186149
chr6 130774709 130774712 MYB TRANSFAC yes 70434687
chr6 130774709 130774712 MYB TRANSFAC yes 105186150
chr6 130774721 130774737 SOX4 JASPAR yes 70434688
chr6 130774721 130774737 SOX4 JASPAR yes 105186151
chr6 130774724 130774735 PHOX2A JASPAR yes 70434689
chr6 130774724 130774735 PHOX2A JASPAR yes 105186152
chr6 130774730 130774734 YY1 TRANSFAC yes 70434690
chr6 130774730 130774734 YY1 TRANSFAC yes 105186153
chr6 130774734 130774740 SOX10 JASPAR yes 70434691
chr6 130774734 130774740 SOX10 JASPAR yes 105186154
SNP sites on vista53499[chr6:130774409-130774738]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 130774484 rs138393665 C T
ELK1 ELK3 ELK4 ERF ERG ETS1 ETV1 ETV2 ETV3 ETV4 ETV5 ETV6 FEV FLI1 JUND
9329835
chr6 130774533 rs12213288 C A
JUN
9329836
Genes possibly regulated by vista53499[chr6:130774409-130774738]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 130465460 130686570 - SAMD3 ENSG00000164483.12 130686570 0.98 1.0 6947 12161
chr6 130686879 130764208 + TMEM200A ENSG00000164484.7 130686879 0.94 1.0 6948 12470
Expression level of Genes
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miRNAs possibly regulated by vista53499[chr6:130774409-130774738]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results