EnhancerDB
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  3. vista5353[chr1:226388791-226388905]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5353[chr1:226388791-226388905]
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Tissue distribution of vista5353
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Transcription factor that possibly regulate vista5353[chr1:226388791-226388905]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226388719 226389129 CTCF UCSC Txn Factor no Conserved 107875682
chr1 226388791 226389055 RAD21 UCSC Txn Factor no Conserved 107875689
chr1 226388798 226388804 TCF4 TRANSFAC yes 35799564
chr1 226388798 226388804 TCF4 TRANSFAC yes 118471024
chr1 226388799 226388808 SRY JASPAR yes 35799565
chr1 226388799 226388808 SRY JASPAR yes 118471025
chr1 226388804 226388807 MYB TRANSFAC yes 35799566
chr1 226388804 226388807 MYB TRANSFAC yes 118471026
chr1 226388811 226388826 FOXP1 JASPAR yes 35799567
chr1 226388811 226388826 FOXP1 JASPAR yes 118471027
chr1 226388815 226388819 TEAD2 TRANSFAC yes 35799568
chr1 226388815 226388819 TEAD2 TRANSFAC yes 118471028
chr1 226388815 226388820 TBP TRANSFAC yes 35799569
chr1 226388815 226388820 TBP TRANSFAC yes 118471029
chr1 226388832 226388838 GATA3 JASPAR yes 35799570
chr1 226388832 226388838 GATA3 JASPAR yes 118471030
chr1 226388840 226388854 E2F7 JASPAR yes 35799571
chr1 226388840 226388854 E2F7 JASPAR yes 118471031
chr1 226388863 226388866 MYB TRANSFAC yes 35799572
chr1 226388863 226388866 MYB TRANSFAC yes 118471032
chr1 226388883 226388892 SOX9 JASPAR yes 35799573
chr1 226388883 226388892 SOX9 JASPAR yes 118471033
chr1 226388885 226388894 SRY JASPAR yes 35799574
chr1 226388885 226388894 SRY JASPAR yes 118471034
chr1 226388900 226388910 REL JASPAR yes 35799575
chr1 226388900 226388910 REL JASPAR yes 118471035
SNP sites on vista5353[chr1:226388791-226388905]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista5353[chr1:226388791-226388905]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226332380 226374431 - ACBD3 ENSG00000182827.8 226374431 0.61 0.99 1897 85640
chr1 226411319 226414755 + MIXL1 ENSG00000185155.7 226411319 0.95 0.98 1898 77586
Expression level of Genes
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miRNAs possibly regulated by vista5353[chr1:226388791-226388905]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results