EnhancerDB
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  3. vista5354[chr1:226404092-226404450]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5354[chr1:226404092-226404450]
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Tissue distribution of vista5354
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Transcription factor that possibly regulate vista5354[chr1:226404092-226404450]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226404088 226404099 FOXH1 JASPAR yes 35801489
chr1 226404088 226404099 FOXH1 JASPAR yes 118471036
chr1 226404092 226404096 YY1 TRANSFAC yes 35801490
chr1 226404092 226404096 YY1 TRANSFAC yes 118471037
chr1 226404098 226404110 EHF JASPAR yes 35801491
chr1 226404098 226404110 EHF JASPAR yes 118471038
chr1 226404098 226404111 ELF3 JASPAR yes 35801492
chr1 226404098 226404111 ELF3 JASPAR yes 118471039
chr1 226404099 226404110 ELF5 JASPAR yes 35801493
chr1 226404099 226404110 ELF5 JASPAR yes 118471040
chr1 226404102 226404107 ETS2 TRANSFAC yes 35801494
chr1 226404102 226404107 ETS2 TRANSFAC yes 118471041
chr1 226404124 226404135 ESRRA JASPAR yes 35801495
chr1 226404124 226404135 ESRRB JASPAR yes 35801496
chr1 226404124 226404135 ESRRA JASPAR yes 118471042
chr1 226404124 226404135 ESRRB JASPAR yes 118471043
chr1 226404128 226404132 ESR1 TRANSFAC yes 35801497
chr1 226404128 226404132 ESR1 TRANSFAC yes 118471044
chr1 226404144 226404148 YY1 TRANSFAC yes 35801498
chr1 226404144 226404148 YY1 TRANSFAC yes 118471045
chr1 226404147 226404151 YY1 TRANSFAC yes 35801499
chr1 226404147 226404151 YY1 TRANSFAC yes 118471046
chr1 226404160 226404169 NFIX JASPAR yes 35801500
chr1 226404160 226404169 NFIX JASPAR yes 118471047
chr1 226404160 226404170 NFIA JASPAR yes 35801501
chr1 226404160 226404170 NFIA JASPAR yes 118471048
chr1 226404160 226404174 PLAG1 JASPAR yes 35801502
chr1 226404160 226404174 PLAG1 JASPAR yes 118471049
chr1 226404162 226404168 NFIC JASPAR yes 35801503
chr1 226404162 226404168 NFIC JASPAR yes 118471050
chr1 226404180 226404183 MYB TRANSFAC yes 35801504
chr1 226404180 226404183 MYB TRANSFAC yes 118471051
chr1 226404200 226404204 YY1 TRANSFAC yes 35801505
chr1 226404200 226404204 YY1 TRANSFAC yes 118471052
chr1 226404222 226404236 SPI1 JASPAR yes 35801506
chr1 226404222 226404236 SPI1 JASPAR yes 118471053
chr1 226404226 226404232 PEA3 TRANSFAC yes 35801507
chr1 226404226 226404232 PEA3 TRANSFAC yes 118471054
chr1 226404237 226404255 MAFF JASPAR yes 35801508
chr1 226404237 226404255 MAFF JASPAR yes 118471055
chr1 226404238 226404253 MAFK JASPAR yes 35801509
chr1 226404238 226404253 MAFK JASPAR yes 118471056
chr1 226404242 226404253 NRL JASPAR yes 35801510
chr1 226404242 226404253 NRL JASPAR yes 118471057
chr1 226404248 226404263 FOXA1 JASPAR yes 35801511
chr1 226404248 226404263 FOXA1 JASPAR yes 118471058
chr1 226404249 226404264 FOXP1 JASPAR yes 35801512
chr1 226404249 226404264 FOXP1 JASPAR yes 118471059
chr1 226404250 226404261 FOXP2 JASPAR yes 35801513
chr1 226404250 226404261 FOXP2 JASPAR yes 118471060
chr1 226404250 226404262 FOXC2 JASPAR yes 35801514
chr1 226404250 226404262 FOXC2 JASPAR yes 118471061
chr1 226404250 226404264 FOXF2 JASPAR yes 35801515
chr1 226404250 226404264 FOXF2 JASPAR yes 118471062
chr1 226404251 226404259 FOXD1 JASPAR yes 35801516
chr1 226404251 226404259 FOXO3 JASPAR yes 35801517
chr1 226404251 226404259 FOXD1 JASPAR yes 118471063
chr1 226404251 226404259 FOXO3 JASPAR yes 118471064
chr1 226404252 226404259 FOXD2 JASPAR yes 35801518
chr1 226404252 226404259 FOXI1 JASPAR yes 35801519
chr1 226404252 226404259 FOXL1 JASPAR yes 35801520
chr1 226404252 226404259 FOXO4 JASPAR yes 35801521
chr1 226404252 226404259 FOXO6 JASPAR yes 35801522
chr1 226404252 226404259 FOXP3 JASPAR yes 35801523
chr1 226404252 226404259 FOXD2 JASPAR yes 118471065
chr1 226404252 226404259 FOXI1 JASPAR yes 118471066
chr1 226404252 226404259 FOXL1 JASPAR yes 118471067
chr1 226404252 226404259 FOXO4 JASPAR yes 118471068
chr1 226404252 226404259 FOXO6 JASPAR yes 118471069
chr1 226404252 226404259 FOXP3 JASPAR yes 118471070
chr1 226404252 226404260 FOXO3 JASPAR yes 35801524
chr1 226404252 226404260 FOXO3 JASPAR yes 118471071
chr1 226404252 226404263 FOXA1 JASPAR yes 35801525
chr1 226404252 226404263 FOXA1 JASPAR yes 118471072
chr1 226404336 226404340 YY1 TRANSFAC yes 35801526
chr1 226404336 226404340 YY1 TRANSFAC yes 118471073
chr1 226404343 226404358 HSF1 JASPAR yes 35801527
chr1 226404343 226404358 HSF1 JASPAR yes 118471074
chr1 226404344 226404357 HSF1 JASPAR yes 35801528
chr1 226404344 226404357 HSF1 JASPAR yes 118471075
chr1 226404365 226404380 STAT2 JASPAR yes 35801529
chr1 226404365 226404380 STAT2 JASPAR yes 118471076
chr1 226404366 226404380 STAT1 JASPAR yes 35801530
chr1 226404366 226404380 STAT1 JASPAR yes 118471077
chr1 226404367 226404379 IRF1 JASPAR yes 35801531
chr1 226404367 226404379 IRF1 JASPAR yes 118471078
chr1 226404369 226404375 TCF4 TRANSFAC yes 35801532
chr1 226404369 226404375 TCF4 TRANSFAC yes 118471079
chr1 226404376 226404382 MZF1 JASPAR yes 35801533
chr1 226404376 226404382 MZF1 JASPAR yes 118471080
chr1 226404402 226404415 EOMES JASPAR yes 35801534
chr1 226404402 226404415 EOMES JASPAR yes 118471081
chr1 226404404 226404414 TBR1 JASPAR yes 35801535
chr1 226404404 226404414 TBR1 JASPAR yes 118471082
chr1 226404404 226404415 TBX2 JASPAR yes 35801536
chr1 226404404 226404415 TBX2 JASPAR yes 118471083
chr1 226404405 226404415 TBX21 JASPAR yes 35801537
chr1 226404405 226404415 TBX21 JASPAR yes 118471084
chr1 226404406 226404409 MYB TRANSFAC yes 35801538
chr1 226404406 226404409 MYB TRANSFAC yes 118471085
chr1 226404411 226404415 YY1 TRANSFAC yes 35801539
chr1 226404411 226404415 YY1 TRANSFAC yes 118471086
chr1 226404434 226404446 IRF1 JASPAR yes 35801540
chr1 226404434 226404446 IRF1 JASPAR yes 118471087
chr1 226404439 226404443 YY1 TRANSFAC yes 35801541
chr1 226404439 226404443 YY1 TRANSFAC yes 118471088
SNP sites on vista5354[chr1:226404092-226404450]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226404180 rs572872219 C T
MYB
990529
chr1 226404220 rs143608717 T C no 990530
Genes possibly regulated by vista5354[chr1:226404092-226404450]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226332380 226374431 - ACBD3 ENSG00000182827.8 226374431 0.61 0.99 1897 70339
chr1 226411319 226414755 + MIXL1 ENSG00000185155.7 226411319 0.95 0.98 1898 93131
chr1 226418850 226497570 - LIN9 ENSG00000183814.11 226497570 0.83 0.98 1899 6880
Expression level of Genes
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miRNAs possibly regulated by vista5354[chr1:226404092-226404450]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results