EnhancerDB
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  3. vista53540[chr6:132787299-132787948]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53540[chr6:132787299-132787948]
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Tissue distribution of vista53540
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Transcription factor that possibly regulate vista53540[chr6:132787299-132787948]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 132787050 132787307 SPI1 UCSC Txn Factor no Conserved 108541645
chr6 132787294 132787311 RARA JASPAR yes 70436199
chr6 132787294 132787311 RARA JASPAR yes 105312590
chr6 132787301 132787311 RORA JASPAR yes 70436200
chr6 132787301 132787311 RORA JASPAR yes 105312591
chr6 132787303 132787311 CREB1 JASPAR yes 70436201
chr6 132787303 132787311 CREB1 JASPAR yes 105312592
chr6 132787304 132787312 NR4A2 JASPAR yes 70436202
chr6 132787304 132787312 NR4A2 JASPAR yes 105312593
chr6 132787306 132787310 ESR1 TRANSFAC yes 70436203
chr6 132787306 132787310 ESR1 TRANSFAC yes 105312594
chr6 132787308 132787322 RXRG JASPAR yes 70436204
chr6 132787308 132787322 RXRG JASPAR yes 105312595
chr6 132787341 132787353 HNF1B JASPAR yes 70436205
chr6 132787341 132787353 HNF1B JASPAR yes 105312596
chr6 132787348 132787357 PITX3 JASPAR yes 70436206
chr6 132787348 132787357 PITX3 JASPAR yes 105312597
chr6 132787348 132787358 GSC2 JASPAR yes 70436207
chr6 132787348 132787358 GSC JASPAR yes 70436208
chr6 132787348 132787358 GSC2 JASPAR yes 105312598
chr6 132787348 132787358 GSC JASPAR yes 105312599
chr6 132787349 132787357 OTX1 JASPAR yes 70436209
chr6 132787349 132787357 OTX2 JASPAR yes 70436210
chr6 132787349 132787357 OTX1 JASPAR yes 105312600
chr6 132787349 132787357 OTX2 JASPAR yes 105312601
chr6 132787357 132787361 YY1 TRANSFAC yes 70436211
chr6 132787357 132787361 YY1 TRANSFAC yes 105312602
chr6 132787364 132787371 E2F1 TRANSFAC yes 70436212
chr6 132787364 132787371 E2F1 TRANSFAC yes 105312603
chr6 132787371 132787374 MYB TRANSFAC yes 70436213
chr6 132787371 132787374 MYB TRANSFAC yes 105312604
chr6 132787376 132787395 REST JASPAR yes 70436214
chr6 132787376 132787395 REST JASPAR yes 105312605
chr6 132787378 132787388 NKX2-3 JASPAR yes 70436215
chr6 132787378 132787388 NKX2-3 JASPAR yes 105312606
chr6 132787379 132787388 NKX2-8 JASPAR yes 70436216
chr6 132787379 132787388 NKX2-8 JASPAR yes 105312607
chr6 132787386 132787397 NRL JASPAR yes 70436217
chr6 132787386 132787397 NRL JASPAR yes 105312608
chr6 132787387 132787397 MSC JASPAR yes 70436218
chr6 132787387 132787397 TFAP4 JASPAR yes 70436219
chr6 132787387 132787397 MSC JASPAR yes 105312609
chr6 132787387 132787397 TFAP4 JASPAR yes 105312610
chr6 132787400 132787409 SOX9 JASPAR yes 70436220
chr6 132787400 132787409 SOX9 JASPAR yes 105312611
chr6 132787401 132787414 HSF2 JASPAR yes 70436221
chr6 132787401 132787414 HSF2 JASPAR yes 105312612
chr6 132787416 132787437 IRF1 JASPAR yes 70436222
chr6 132787416 132787437 IRF1 JASPAR yes 105312613
chr6 132787420 132787432 IRF1 JASPAR yes 70436223
chr6 132787420 132787432 IRF1 JASPAR yes 105312614
chr6 132787450 132787454 YY1 TRANSFAC yes 70436224
chr6 132787450 132787454 YY1 TRANSFAC yes 105312615
chr6 132787453 132787463 RELA JASPAR yes 70436225
chr6 132787453 132787463 RELA JASPAR yes 105312616
chr6 132787456 132787461 H4TF1 TRANSFAC yes 70436226
chr6 132787456 132787461 H4TF1 TRANSFAC yes 105312617
chr6 132787457 132787465 FEV JASPAR yes 70436227
chr6 132787457 132787465 FEV JASPAR yes 105312618
chr6 132787479 132787484 ETS2 TRANSFAC yes 70436228
chr6 132787479 132787484 ETS2 TRANSFAC yes 105312619
chr6 132787489 132787499 HOXB13 JASPAR yes 70436229
chr6 132787489 132787499 HOXB13 JASPAR yes 105312620
chr6 132787493 132787497 YY1 TRANSFAC yes 70436230
chr6 132787493 132787497 YY1 TRANSFAC yes 105312621
chr6 132787510 132787514 NFE TRANSFAC yes 70436231
chr6 132787510 132787514 NFE TRANSFAC yes 105312622
chr6 132787548 132787554 TCF4 TRANSFAC yes 70436232
chr6 132787548 132787554 TCF4 TRANSFAC yes 105312623
chr6 132787558 132787572 IRF7 JASPAR yes 70436233
chr6 132787558 132787572 IRF7 JASPAR yes 105312624
chr6 132787559 132787573 ONECUT3 JASPAR yes 70436234
chr6 132787559 132787573 ONECUT3 JASPAR yes 105312625
chr6 132787561 132787572 BATF JASPAR yes 70436235
chr6 132787561 132787572 BATF JASPAR yes 105312626
chr6 132787568 132787584 ZNF143 JASPAR yes 70436236
chr6 132787568 132787584 ZNF143 JASPAR yes 105312627
chr6 132787570 132787585 RUNX2 JASPAR yes 70436237
chr6 132787570 132787585 RUNX2 JASPAR yes 105312628
chr6 132787570 132787587 ZNF410 JASPAR yes 70436238
chr6 132787570 132787587 ZNF410 JASPAR yes 105312629
chr6 132787573 132787579 SOX10 JASPAR yes 70436239
chr6 132787573 132787579 SOX10 JASPAR yes 105312630
chr6 132787574 132787584 RUNX3 JASPAR yes 70436240
chr6 132787574 132787584 RUNX3 JASPAR yes 105312631
chr6 132787632 132787643 CDX2 JASPAR yes 70436241
chr6 132787632 132787643 CDX2 JASPAR yes 105312632
chr6 132787669 132787684 AR JASPAR yes 70436242
chr6 132787669 132787684 AR JASPAR yes 105312633
chr6 132787680 132787688 FOXO3 JASPAR yes 70436243
chr6 132787680 132787688 FOXO3 JASPAR yes 105312634
chr6 132787686 132787690 YY1 TRANSFAC yes 70436244
chr6 132787686 132787690 YY1 TRANSFAC yes 105312635
chr6 132787739 132787748 PITX3 JASPAR yes 70436245
chr6 132787739 132787748 PITX3 JASPAR yes 105312636
chr6 132787739 132787749 GSC2 JASPAR yes 70436246
chr6 132787739 132787749 GSC JASPAR yes 70436247
chr6 132787739 132787749 GSC2 JASPAR yes 105312637
chr6 132787739 132787749 GSC JASPAR yes 105312638
chr6 132787740 132787748 OTX1 JASPAR yes 70436248
chr6 132787740 132787748 OTX2 JASPAR yes 70436249
chr6 132787740 132787748 RHOXF1 JASPAR yes 70436250
chr6 132787740 132787748 OTX1 JASPAR yes 105312639
chr6 132787740 132787748 OTX2 JASPAR yes 105312640
chr6 132787740 132787748 RHOXF1 JASPAR yes 105312641
chr6 132787748 132787756 RHOXF1 JASPAR yes 70436251
chr6 132787748 132787756 RHOXF1 JASPAR yes 105312642
chr6 132787750 132787765 JUND JASPAR yes 70436252
chr6 132787750 132787765 JUND JASPAR yes 105312643
chr6 132787756 132787766 SREBF1 JASPAR yes 70436253
chr6 132787756 132787766 SREBF1 JASPAR yes 105312644
chr6 132787761 132787765 H1TF2 TRANSFAC yes 70436254
chr6 132787761 132787765 NFE TRANSFAC yes 70436255
chr6 132787761 132787765 SRF TRANSFAC yes 70436256
chr6 132787761 132787765 H1TF2 TRANSFAC yes 105312645
chr6 132787761 132787765 NFE TRANSFAC yes 105312646
chr6 132787761 132787765 SRF TRANSFAC yes 105312647
chr6 132787769 132787780 TBX2 JASPAR yes 70436257
chr6 132787769 132787780 TBX2 JASPAR yes 105312648
chr6 132787774 132787786 HNF1B JASPAR yes 70436258
chr6 132787774 132787786 HNF1B JASPAR yes 105312649
chr6 132787781 132787796 FOXA1 JASPAR yes 70436259
chr6 132787781 132787796 FOXA1 JASPAR yes 105312650
chr6 132787796 132787812 SOX8 JASPAR yes 70436260
chr6 132787796 132787812 SOX8 JASPAR yes 105312651
chr6 132787801 132787816 MEF2A JASPAR yes 70436261
chr6 132787801 132787816 MEF2A JASPAR yes 105312652
chr6 132787802 132787814 MEF2A JASPAR yes 70436262
chr6 132787802 132787814 MEF2B JASPAR yes 70436263
chr6 132787802 132787814 MEF2D JASPAR yes 70436264
chr6 132787802 132787814 MEF2A JASPAR yes 105312653
chr6 132787802 132787814 MEF2B JASPAR yes 105312654
chr6 132787802 132787814 MEF2D JASPAR yes 105312655
chr6 132787803 132787813 MEF2A JASPAR yes 70436265
chr6 132787803 132787813 MEF2A JASPAR yes 105312656
chr6 132787818 132787827 THAP1 JASPAR yes 70436266
chr6 132787818 132787827 THAP1 JASPAR yes 105312657
chr6 132787878 132787889 TBX20 JASPAR yes 70436267
chr6 132787878 132787889 TBX20 JASPAR yes 105312658
chr6 132787889 132787893 LFA1 TRANSFAC yes 70436268
chr6 132787889 132787893 LFA1 TRANSFAC yes 105312659
chr6 132787899 132787911 POU3F1 JASPAR yes 70436269
chr6 132787899 132787911 POU3F2 JASPAR yes 70436270
chr6 132787899 132787911 POU3F1 JASPAR yes 105312660
chr6 132787899 132787911 POU3F2 JASPAR yes 105312661
chr6 132787899 132787912 POU3F3 JASPAR yes 70436271
chr6 132787899 132787912 POU3F3 JASPAR yes 105312662
chr6 132787900 132787912 POU2F1 JASPAR yes 70436272
chr6 132787900 132787912 POU2F1 JASPAR yes 105312663
chr6 132787903 132787906 MYB TRANSFAC yes 70436273
chr6 132787903 132787906 MYB TRANSFAC yes 105312664
chr6 132787916 132787928 PBX1 JASPAR yes 70436274
chr6 132787916 132787928 PBX1 JASPAR yes 105312665
chr6 132787917 132787930 DUXA JASPAR yes 70436275
chr6 132787917 132787930 DUXA JASPAR yes 105312666
chr6 132787917 132787931 ONECUT1 JASPAR yes 70436276
chr6 132787917 132787931 ONECUT2 JASPAR yes 70436277
chr6 132787917 132787931 ONECUT3 JASPAR yes 70436278
chr6 132787917 132787931 ONECUT1 JASPAR yes 105312667
chr6 132787917 132787931 ONECUT2 JASPAR yes 105312668
chr6 132787917 132787931 ONECUT3 JASPAR yes 105312669
chr6 132787918 132787928 PAX3 JASPAR yes 70436279
chr6 132787918 132787928 PAX7 JASPAR yes 70436280
chr6 132787918 132787928 PAX3 JASPAR yes 105312670
chr6 132787918 132787928 PAX7 JASPAR yes 105312671
chr6 132787918 132787929 DUX4 JASPAR yes 70436281
chr6 132787918 132787929 DUX4 JASPAR yes 105312672
SNP sites on vista53540[chr6:132787299-132787948]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 132787591 rs79981415 T C no 9341021
chr6 132787706 rs12213360 T A no 9341022
chr6 132787863 rs138577010 T C,G no 9341023
chr6 132787922 rs149329502 T C
DUX4 DUXA ONECUT1 ONECUT2 ONECUT3 PAX3 PAX7 PBX1
9341024
Genes possibly regulated by vista53540[chr6:132787299-132787948]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 132617194 132722684 - MOXD1 ENSG00000079931.10 132722684 0.95 0.98 6959 35385
chr6 132767006 132834337 - STX7 ENSG00000079950.9 132834337 0.82 0.99 6960 53611
chr6 132873832 132874860 + TAAR8 ENSG00000146385.1 132873832 0.0 0.0 6961 14116
Expression level of Genes
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miRNAs possibly regulated by vista53540[chr6:132787299-132787948]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results