EnhancerDB
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  3. vista53549[chr6:133067303-133067613]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53549[chr6:133067303-133067613]
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Tissue distribution of vista53549
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Transcription factor that possibly regulate vista53549[chr6:133067303-133067613]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 133067293 133067308 SOX21 JASPAR yes 70436501
chr6 133067293 133067308 SOX21 JASPAR yes 105325804
chr6 133067322 133067343 REST JASPAR yes 70436502
chr6 133067322 133067343 REST JASPAR yes 105325805
chr6 133067332 133067342 TBX21 JASPAR yes 70436503
chr6 133067332 133067342 TBX21 JASPAR yes 105325806
chr6 133067332 133067343 TBX2 JASPAR yes 70436504
chr6 133067332 133067343 TBX2 JASPAR yes 105325807
chr6 133067332 133067345 EOMES JASPAR yes 70436505
chr6 133067332 133067345 EOMES JASPAR yes 105325808
chr6 133067333 133067343 TBR1 JASPAR yes 70436506
chr6 133067333 133067343 TBR1 JASPAR yes 105325809
chr6 133067349 133067357 FOXO3 JASPAR yes 70436507
chr6 133067349 133067357 FOXO3 JASPAR yes 105325810
chr6 133067357 133067361 YY1 TRANSFAC yes 70436508
chr6 133067357 133067361 YY1 TRANSFAC yes 105325811
chr6 133067361 133067370 HIC2 JASPAR yes 70436509
chr6 133067361 133067370 HIC2 JASPAR yes 105325812
chr6 133067363 133067373 SP1 JASPAR yes 70436510
chr6 133067363 133067373 SP1 JASPAR yes 105325813
chr6 133067364 133067368 LFA1 TRANSFAC yes 70436511
chr6 133067364 133067368 LFA1 TRANSFAC yes 105325814
chr6 133067369 133067380 FOSL2 JASPAR yes 70436512
chr6 133067369 133067380 JUNB JASPAR yes 70436513
chr6 133067369 133067380 FOSL2 JASPAR yes 105325815
chr6 133067369 133067380 JUNB JASPAR yes 105325816
chr6 133067370 133067378 FOXC1 JASPAR yes 70436514
chr6 133067370 133067378 FOXC1 JASPAR yes 105325817
chr6 133067372 133067378 JUN TRANSFAC yes 70436515
chr6 133067372 133067378 JUN TRANSFAC yes 105325818
chr6 133067376 133067379 MYB TRANSFAC yes 70436516
chr6 133067376 133067379 MYB TRANSFAC yes 105325819
chr6 133067390 133067393 MYB TRANSFAC yes 70436517
chr6 133067390 133067393 MYB TRANSFAC yes 105325820
chr6 133067393 133067407 IRF7 JASPAR yes 70436518
chr6 133067393 133067407 IRF7 JASPAR yes 105325821
chr6 133067399 133067419 RREB1 JASPAR yes 70436519
chr6 133067399 133067419 RREB1 JASPAR yes 105325822
chr6 133067401 133067410 NKX3-2 JASPAR yes 70436520
chr6 133067401 133067410 NKX3-2 JASPAR yes 105325823
chr6 133067404 133067425 ZNF263 JASPAR yes 70436521
chr6 133067404 133067425 ZNF263 JASPAR yes 105325824
chr6 133067410 133067415 SP1 TRANSFAC yes 70436522
chr6 133067410 133067415 SP1 TRANSFAC yes 105325825
chr6 133067422 133067427 GATA2 JASPAR yes 70436523
chr6 133067422 133067427 GATA2 JASPAR yes 105325826
chr6 133067426 133067439 SCRT2 JASPAR yes 70436524
chr6 133067426 133067439 SCRT2 JASPAR yes 105325827
chr6 133067426 133067441 SCRT1 JASPAR yes 70436525
chr6 133067426 133067441 SCRT1 JASPAR yes 105325828
chr6 133067436 133067447 CEBPA JASPAR yes 70436526
chr6 133067436 133067447 CEBPA JASPAR yes 105325829
chr6 133067437 133067448 CEBPB JASPAR yes 70436527
chr6 133067437 133067448 CEBPB JASPAR yes 105325830
chr6 133067468 133067476 GATA5 JASPAR yes 70436528
chr6 133067468 133067476 GATA5 JASPAR yes 105325831
chr6 133067468 133067482 CREB3 JASPAR yes 70436529
chr6 133067468 133067482 CREB3 JASPAR yes 105325832
chr6 133067469 133067483 XBP1 JASPAR yes 70436530
chr6 133067469 133067483 XBP1 JASPAR yes 105325833
chr6 133067471 133067474 MYB TRANSFAC yes 70436531
chr6 133067471 133067474 MYB TRANSFAC yes 105325834
chr6 133067474 133067485 FOXB1 JASPAR yes 70436532
chr6 133067474 133067485 FOXC1 JASPAR yes 70436533
chr6 133067474 133067485 FOXB1 JASPAR yes 105325835
chr6 133067474 133067485 FOXC1 JASPAR yes 105325836
chr6 133067500 133067512 PBX1 JASPAR yes 70436534
chr6 133067500 133067512 PBX1 JASPAR yes 105325837
chr6 133067538 133067548 POU6F2 JASPAR yes 70436535
chr6 133067538 133067548 POU6F2 JASPAR yes 105325838
chr6 133067548 133067560 PKNOX2 JASPAR yes 70436536
chr6 133067548 133067560 TGIF1 JASPAR yes 70436537
chr6 133067548 133067560 PKNOX2 JASPAR yes 105325839
chr6 133067548 133067560 TGIF1 JASPAR yes 105325840
chr6 133067560 133067570 MYF6 JASPAR yes 70436538
chr6 133067560 133067570 MYF6 JASPAR yes 105325841
chr6 133067562 133067566 YY1 TRANSFAC yes 70436539
chr6 133067562 133067566 YY1 TRANSFAC yes 105325842
chr6 133067584 133067594 MYF6 JASPAR yes 70436540
chr6 133067584 133067594 MYF6 JASPAR yes 105325843
chr6 133067587 133067602 MEF2C JASPAR yes 70436541
chr6 133067587 133067602 MEF2C JASPAR yes 105325844
SNP sites on vista53549[chr6:133067303-133067613]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 133067364 rs12663385 T C
HIC2 LFA1 SP1
9342443
chr6 133067371 rs547490986 GGTGA G
FOSL2 FOXC1 JUNB SP1
9342444
chr6 133067401 rs147731611 C A
IRF7 NKX3-2 RREB1
9342445
Genes possibly regulated by vista53549[chr6:133067303-133067613]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 133002729 133035188 - VNN1 ENSG00000112299.7 133035188 0.98 0.96 6966 67885
chr6 133043926 133055904 - VNN3 ENSG00000093134.9 133055904 0.95 0.98 6967 88601
chr6 133065009 133084598 - VNN2 ENSG00000112303.9 133084598 0.95 0.94 6968 83015
chr6 133090509 133119701 - SLC18B1 ENSG00000146409.6 133119701 0.73 0.99 6969 47912
chr6 133135580 133138703 + RPS12 ENSG00000112306.7 133135580 0.77 1.0 6970 32033
Expression level of Genes
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miRNAs possibly regulated by vista53549[chr6:133067303-133067613]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results