EnhancerDB
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  3. vista53550[chr6:133070302-133070479]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53550[chr6:133070302-133070479]
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Tissue distribution of vista53550
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Transcription factor that possibly regulate vista53550[chr6:133070302-133070479]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 133070304 133070314 HOXB13 JASPAR yes 70436542
chr6 133070304 133070314 HOXD13 JASPAR yes 70436543
chr6 133070305 133070314 CDX1 JASPAR yes 70436544
chr6 133070305 133070316 CDX2 JASPAR yes 70436545
chr6 133070325 133070340 NR2C2 JASPAR yes 70436546
chr6 133070333 133070347 SPI1 JASPAR yes 70436547
chr6 133070341 133070345 YY1 TRANSFAC yes 70436548
chr6 133070352 133070356 YY1 TRANSFAC yes 70436549
chr6 133070356 133070362 JUN TRANSFAC yes 70436550
chr6 133070375 133070378 MYB TRANSFAC yes 70436551
chr6 133070375 133070386 ELK4 JASPAR yes 70436552
chr6 133070375 133070386 FLI1 JASPAR yes 70436553
chr6 133070376 133070386 ELK3 JASPAR yes 70436554
chr6 133070376 133070386 ERF JASPAR yes 70436555
chr6 133070376 133070386 ERG JASPAR yes 70436556
chr6 133070376 133070386 ETS1 JASPAR yes 70436557
chr6 133070376 133070386 ETV6 JASPAR yes 70436558
chr6 133070376 133070386 FEV JASPAR yes 70436559
chr6 133070376 133070386 FLI1 JASPAR yes 70436560
chr6 133070376 133070386 GABPA JASPAR yes 70436561
chr6 133070376 133070387 ETV2 JASPAR yes 70436562
chr6 133070376 133070388 ELF4 JASPAR yes 70436563
chr6 133070376 133070389 ELF1 JASPAR yes 70436564
chr6 133070376 133070390 SPIC JASPAR yes 70436565
chr6 133070377 133070384 SPI1 JASPAR yes 70436566
chr6 133070377 133070385 EHF JASPAR yes 70436567
chr6 133070377 133070385 FEV JASPAR yes 70436568
chr6 133070385 133070398 ATF4 JASPAR yes 70436569
chr6 133070396 133070400 YY1 TRANSFAC yes 70436570
chr6 133070397 133070408 FOXA1 JASPAR yes 70436571
chr6 133070425 133070431 TCF4 TRANSFAC yes 70436572
chr6 133070436 133070442 TCF4 TRANSFAC yes 70436573
chr6 133070443 133070458 FOXP1 JASPAR yes 70436574
SNP sites on vista53550[chr6:133070302-133070479]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 133070331 rs34350418 T C
NR2C2
9342477
chr6 133070397 rs9483498 C T
ATF4 FOXA1 YY1
9342478
chr6 133070398 rs9493422 A G
ATF4 FOXA1 YY1
9342479
Genes possibly regulated by vista53550[chr6:133070302-133070479]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 133002729 133035188 - VNN1 ENSG00000112299.7 133035188 0.98 0.96 6966 64886
chr6 133043926 133055904 - VNN3 ENSG00000093134.9 133055904 0.95 0.98 6967 85602
chr6 133065009 133084598 - VNN2 ENSG00000112303.9 133084598 0.95 0.94 6968 85881
chr6 133090509 133119701 - SLC18B1 ENSG00000146409.6 133119701 0.73 0.99 6969 50778
chr6 133135580 133138703 + RPS12 ENSG00000112306.7 133135580 0.77 1.0 6970 34899
Expression level of Genes
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miRNAs possibly regulated by vista53550[chr6:133070302-133070479]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results