EnhancerDB
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  3. vista53553[chr6:133133336-133133580]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53553[chr6:133133336-133133580]
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Tissue distribution of vista53553
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Transcription factor that possibly regulate vista53553[chr6:133133336-133133580]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 133133333 133133348 FOXP1 JASPAR yes 70436674
chr6 133133333 133133348 FOXP1 JASPAR yes 105328033
chr6 133133334 133133349 FOXP1 JASPAR yes 70436675
chr6 133133334 133133349 FOXP1 JASPAR yes 105328034
chr6 133133335 133133350 FOXP1 JASPAR yes 70436676
chr6 133133335 133133350 FOXP1 JASPAR yes 105328035
chr6 133133335 133133356 IRF1 JASPAR yes 70436677
chr6 133133335 133133356 IRF1 JASPAR yes 105328036
chr6 133133336 133133351 FOXP1 JASPAR yes 70436678
chr6 133133336 133133351 FOXP1 JASPAR yes 105328037
chr6 133133336 133133357 IRF1 JASPAR yes 70436679
chr6 133133336 133133357 IRF1 JASPAR yes 105328038
chr6 133133337 133133352 FOXP1 JASPAR yes 70436680
chr6 133133337 133133352 FOXP1 JASPAR yes 105328039
chr6 133133337 133133358 IRF1 JASPAR yes 70436681
chr6 133133337 133133358 IRF1 JASPAR yes 105328040
chr6 133133338 133133353 FOXP1 JASPAR yes 70436682
chr6 133133338 133133353 FOXP1 JASPAR yes 105328041
chr6 133133338 133133359 IRF1 JASPAR yes 70436683
chr6 133133338 133133359 IRF1 JASPAR yes 105328042
chr6 133133339 133133354 FOXP1 JASPAR yes 70436684
chr6 133133339 133133354 FOXP1 JASPAR yes 105328043
chr6 133133339 133133360 IRF1 JASPAR yes 70436685
chr6 133133339 133133360 IRF1 JASPAR yes 105328044
chr6 133133340 133133355 FOXP1 JASPAR yes 70436686
chr6 133133340 133133355 FOXP1 JASPAR yes 105328045
chr6 133133340 133133361 IRF1 JASPAR yes 70436687
chr6 133133340 133133361 IRF1 JASPAR yes 105328046
chr6 133133341 133133356 FOXP1 JASPAR yes 70436688
chr6 133133341 133133356 FOXP1 JASPAR yes 105328047
chr6 133133341 133133362 IRF1 JASPAR yes 70436689
chr6 133133341 133133362 IRF1 JASPAR yes 105328048
chr6 133133342 133133357 FOXP1 JASPAR yes 70436690
chr6 133133342 133133357 FOXP1 JASPAR yes 105328049
chr6 133133342 133133363 IRF1 JASPAR yes 70436691
chr6 133133342 133133363 IRF1 JASPAR yes 105328050
chr6 133133343 133133358 FOXP1 JASPAR yes 70436692
chr6 133133343 133133358 FOXP1 JASPAR yes 105328051
chr6 133133344 133133359 FOXP1 JASPAR yes 70436693
chr6 133133344 133133359 FOXP1 JASPAR yes 105328052
chr6 133133344 133133365 IRF1 JASPAR yes 70436694
chr6 133133344 133133365 IRF1 JASPAR yes 105328053
chr6 133133345 133133360 FOXP1 JASPAR yes 70436695
chr6 133133345 133133360 FOXP1 JASPAR yes 105328054
chr6 133133348 133133363 PRDM1 JASPAR yes 70436696
chr6 133133348 133133363 STAT2 JASPAR yes 70436697
chr6 133133348 133133363 PRDM1 JASPAR yes 105328055
chr6 133133348 133133363 STAT2 JASPAR yes 105328056
chr6 133133396 133133410 PLAG1 JASPAR yes 70436698
chr6 133133396 133133410 PLAG1 JASPAR yes 105328057
chr6 133133404 133133416 INSM1 JASPAR yes 70436699
chr6 133133404 133133416 INSM1 JASPAR yes 105328058
chr6 133133417 133133421 YY1 TRANSFAC yes 70436700
chr6 133133417 133133421 YY1 TRANSFAC yes 105328059
chr6 133133430 133133442 GRHL1 JASPAR yes 70436701
chr6 133133430 133133442 GRHL1 JASPAR yes 105328060
chr6 133133431 133133441 TFCP2 JASPAR yes 70436702
chr6 133133431 133133441 TFCP2 JASPAR yes 105328061
chr6 133133435 133133446 NFIL3 JASPAR yes 70436703
chr6 133133435 133133446 NFIL3 JASPAR yes 105328062
chr6 133133436 133133448 DBP JASPAR yes 70436704
chr6 133133436 133133448 HLF JASPAR yes 70436705
chr6 133133436 133133448 TEF JASPAR yes 70436706
chr6 133133436 133133448 DBP JASPAR yes 105328063
chr6 133133436 133133448 HLF JASPAR yes 105328064
chr6 133133436 133133448 TEF JASPAR yes 105328065
chr6 133133438 133133449 NFIL3 JASPAR yes 70436707
chr6 133133438 133133449 NFIL3 JASPAR yes 105328066
chr6 133133441 133133445 TEAD2 TRANSFAC yes 70436708
chr6 133133441 133133445 TEAD2 TRANSFAC yes 105328067
chr6 133133450 133133461 NFIL3 JASPAR yes 70436709
chr6 133133450 133133461 NFIL3 JASPAR yes 105328068
chr6 133133453 133133464 NFIL3 JASPAR yes 70436710
chr6 133133453 133133464 NFIL3 JASPAR yes 105328069
chr6 133133456 133133460 TEAD2 TRANSFAC yes 70436711
chr6 133133456 133133460 TEAD2 TRANSFAC yes 105328070
chr6 133133456 133133470 RORA JASPAR yes 70436712
chr6 133133456 133133470 RORA JASPAR yes 105328071
chr6 133133463 133133474 NFIL3 JASPAR yes 70436713
chr6 133133463 133133474 NFIL3 JASPAR yes 105328072
chr6 133133464 133133476 DBP JASPAR yes 70436714
chr6 133133464 133133476 HLF JASPAR yes 70436715
chr6 133133464 133133476 TEF JASPAR yes 70436716
chr6 133133464 133133476 DBP JASPAR yes 105328073
chr6 133133464 133133476 HLF JASPAR yes 105328074
chr6 133133464 133133476 TEF JASPAR yes 105328075
chr6 133133466 133133477 NFIL3 JASPAR yes 70436717
chr6 133133466 133133477 NFIL3 JASPAR yes 105328076
chr6 133133469 133133473 TEAD2 TRANSFAC yes 70436718
chr6 133133469 133133473 TEAD2 TRANSFAC yes 105328077
chr6 133133472 133133483 NFIL3 JASPAR yes 70436719
chr6 133133472 133133483 NFIL3 JASPAR yes 105328078
chr6 133133473 133133485 DBP JASPAR yes 70436720
chr6 133133473 133133485 HLF JASPAR yes 70436721
chr6 133133473 133133485 DBP JASPAR yes 105328079
chr6 133133473 133133485 HLF JASPAR yes 105328080
chr6 133133475 133133486 NFIL3 JASPAR yes 70436722
chr6 133133475 133133486 NFIL3 JASPAR yes 105328081
chr6 133133478 133133482 TEAD2 TRANSFAC yes 70436723
chr6 133133478 133133482 TEAD2 TRANSFAC yes 105328082
chr6 133133478 133133492 RORA JASPAR yes 70436724
chr6 133133478 133133492 RORA JASPAR yes 105328083
chr6 133133485 133133496 NFIL3 JASPAR yes 70436725
chr6 133133485 133133496 NFIL3 JASPAR yes 105328084
chr6 133133486 133133498 DBP JASPAR yes 70436726
chr6 133133486 133133498 HLF JASPAR yes 70436727
chr6 133133486 133133498 TEF JASPAR yes 70436728
chr6 133133486 133133498 DBP JASPAR yes 105328085
chr6 133133486 133133498 HLF JASPAR yes 105328086
chr6 133133486 133133498 TEF JASPAR yes 105328087
chr6 133133488 133133499 NFIL3 JASPAR yes 70436729
chr6 133133488 133133499 NFIL3 JASPAR yes 105328088
chr6 133133491 133133495 TEAD2 TRANSFAC yes 70436730
chr6 133133491 133133495 TEAD2 TRANSFAC yes 105328089
chr6 133133504 133133510 TBP TRANSFAC yes 70436731
chr6 133133504 133133510 TBP TRANSFAC yes 105328090
chr6 133133528 133133539 E2F6 JASPAR yes 70436732
chr6 133133528 133133539 E2F6 JASPAR yes 105328091
chr6 133133552 133133556 YY1 TRANSFAC yes 70436733
chr6 133133552 133133556 YY1 TRANSFAC yes 105328092
chr6 133133563 133133578 HNF1A JASPAR yes 70436734
chr6 133133563 133133578 HNF1A JASPAR yes 105328093
chr6 133133564 133133576 HNF1B JASPAR yes 70436735
chr6 133133564 133133576 HNF1B JASPAR yes 105328094
chr6 133133564 133133577 HNF1B JASPAR yes 70436736
chr6 133133564 133133577 HNF1B JASPAR yes 105328095
chr6 133133567 133133582 LEF1 JASPAR yes 70436737
chr6 133133567 133133582 LEF1 JASPAR yes 105328096
chr6 133133570 133133574 YY1 TRANSFAC yes 70436738
chr6 133133570 133133574 YY1 TRANSFAC yes 105328097
SNP sites on vista53553[chr6:133133336-133133580]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 133133375 rs79267511 C T no 9342730
chr6 133133388 rs191915892 C T no 9342731
chr6 133133537 rs73772960 G T
E2F6
9342732
Genes possibly regulated by vista53553[chr6:133133336-133133580]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 133002729 133035188 - VNN1 ENSG00000112299.7 133035188 0.98 0.96 6966 1852
chr6 133043926 133055904 - VNN3 ENSG00000093134.9 133055904 0.95 0.98 6967 22568
chr6 133065009 133084598 - VNN2 ENSG00000112303.9 133084598 0.95 0.94 6968 51262
chr6 133090509 133119701 - SLC18B1 ENSG00000146409.6 133119701 0.73 0.99 6969 86365
chr6 133135580 133138703 + RPS12 ENSG00000112306.7 133135580 0.77 1.0 6970 98000
Expression level of Genes
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miRNAs possibly regulated by vista53553[chr6:133133336-133133580]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results