EnhancerDB
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  3. vista53570[chr6:134264415-134264799]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53570[chr6:134264415-134264799]
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Tissue distribution of vista53570
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Transcription factor that possibly regulate vista53570[chr6:134264415-134264799]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 134264416 134264427 CDX2 JASPAR yes 70437422
chr6 134264417 134264428 HOXA10 JASPAR yes 70437423
chr6 134264418 134264427 CDX1 JASPAR yes 70437424
chr6 134264418 134264428 HOXA13 JASPAR yes 70437425
chr6 134264418 134264428 HOXB13 JASPAR yes 70437426
chr6 134264418 134264428 HOXD13 JASPAR yes 70437427
chr6 134264429 134264432 MYB TRANSFAC yes 70437428
chr6 134264459 134264463 YY1 TRANSFAC yes 70437429
chr6 134264460 134264470 NFIA JASPAR yes 70437430
chr6 134264461 134264470 NFIX JASPAR yes 70437431
chr6 134264462 134264468 NFIC JASPAR yes 70437432
chr6 134264469 134264479 POU6F2 JASPAR yes 70437433
chr6 134264470 134264480 GSX1 JASPAR yes 70437434
chr6 134264470 134264480 GSX2 JASPAR yes 70437435
chr6 134264470 134264481 HOXC13 JASPAR yes 70437436
chr6 134264471 134264479 NKX6-1 JASPAR yes 70437437
chr6 134264471 134264479 NKX6-2 JASPAR yes 70437438
chr6 134264471 134264481 HOXC10 JASPAR yes 70437439
chr6 134264471 134264481 HOXD13 JASPAR yes 70437440
chr6 134264473 134264477 YY1 TRANSFAC yes 70437441
chr6 134264499 134264514 LEF1 JASPAR yes 70437442
chr6 134264508 134264514 GATA3 JASPAR yes 70437443
chr6 134264525 134264535 TEAD1 JASPAR yes 70437444
chr6 134264525 134264535 TEAD4 JASPAR yes 70437445
chr6 134264529 134264544 MEF2A JASPAR yes 70437446
chr6 134264530 134264545 MEF2C JASPAR yes 70437447
chr6 134264533 134264537 YY1 TRANSFAC yes 70437448
chr6 134264536 134264542 TCF4 TRANSFAC yes 70437449
chr6 134264539 134264550 CEBPA JASPAR yes 70437450
chr6 134264540 134264551 CEBPB JASPAR yes 70437451
chr6 134264551 134264565 GATA2 JASPAR yes 70437452
chr6 134264555 134264563 GATA5 JASPAR yes 70437453
chr6 134264567 134264571 YY1 TRANSFAC yes 70437454
chr6 134264569 134264584 MEF2C JASPAR yes 70437455
chr6 134264570 134264585 MEF2A JASPAR yes 70437456
chr6 134264579 134264582 MYB TRANSFAC yes 70437457
chr6 134264582 134264586 H1TF2 TRANSFAC yes 70437458
chr6 134264582 134264586 NFE TRANSFAC yes 70437459
chr6 134264582 134264586 SRF TRANSFAC yes 70437460
chr6 134264582 134264596 POU1F1 JASPAR yes 70437461
chr6 134264595 134264598 MYB TRANSFAC yes 70437462
chr6 134264598 134264602 YY1 TRANSFAC yes 70437463
chr6 134264613 134264618 GATA2 JASPAR yes 70437464
chr6 134264618 134264625 NFATC2 JASPAR yes 70437465
chr6 134264640 134264656 POU4F2 JASPAR yes 70437466
chr6 134264640 134264656 POU4F3 JASPAR yes 70437467
chr6 134264642 134264656 POU4F1 JASPAR yes 70437468
chr6 134264643 134264654 CDX2 JASPAR yes 70437469
chr6 134264649 134264653 YY1 TRANSFAC yes 70437470
chr6 134264660 134264665 ETS2 TRANSFAC yes 70437471
chr6 134264676 134264691 FOXP1 JASPAR yes 70437472
chr6 134264677 134264688 FOXP2 JASPAR yes 70437473
chr6 134264678 134264693 FOXP1 JASPAR yes 70437474
chr6 134264691 134264695 YY1 TRANSFAC yes 70437475
chr6 134264692 134264702 NFATC3 JASPAR yes 70437476
chr6 134264693 134264700 NFATC2 JASPAR yes 70437477
chr6 134264704 134264708 YY1 TRANSFAC yes 70437478
chr6 134264719 134264723 NFE TRANSFAC yes 70437479
chr6 134264724 134264728 H1TF2 TRANSFAC yes 70437480
chr6 134264724 134264728 NFE TRANSFAC yes 70437481
chr6 134264724 134264728 SRF TRANSFAC yes 70437482
chr6 134264736 134264752 POU4F2 JASPAR yes 70437483
chr6 134264736 134264752 POU4F3 JASPAR yes 70437484
chr6 134264738 134264752 POU4F1 JASPAR yes 70437485
chr6 134264738 134264753 HNF1A JASPAR yes 70437486
chr6 134264739 134264749 LHX6 JASPAR yes 70437487
chr6 134264739 134264749 MNX1 JASPAR yes 70437488
chr6 134264739 134264749 POU6F1 JASPAR yes 70437489
chr6 134264739 134264752 HNF1B JASPAR yes 70437490
chr6 134264739 134264755 POU4F3 JASPAR yes 70437491
chr6 134264740 134264748 LMX1A JASPAR yes 70437492
chr6 134264740 134264748 LMX1B JASPAR yes 70437493
chr6 134264740 134264748 NKX6-1 JASPAR yes 70437494
chr6 134264740 134264748 NKX6-2 JASPAR yes 70437495
chr6 134264740 134264748 VAX1 JASPAR yes 70437496
chr6 134264740 134264748 VAX2 JASPAR yes 70437497
chr6 134264740 134264748 VSX1 JASPAR yes 70437498
chr6 134264740 134264748 VSX2 JASPAR yes 70437499
chr6 134264746 134264760 ONECUT1 JASPAR yes 70437500
chr6 134264746 134264760 ONECUT2 JASPAR yes 70437501
chr6 134264746 134264760 ONECUT3 JASPAR yes 70437502
chr6 134264770 134264775 GATA1 TRANSFAC yes 70437503
chr6 134264782 134264797 FOXP1 JASPAR yes 70437504
chr6 134264783 134264798 FOXP1 JASPAR yes 70437505
chr6 134264784 134264799 FOXP1 JASPAR yes 70437506
SNP sites on vista53570[chr6:134264415-134264799]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 134264554 rs552101827 GATCTT G
GATA2
9348412
chr6 134264754 rs4896015 C T
ONECUT1 ONECUT2 ONECUT3 POU4F3
9348413
chr6 134264784 rs34846464 C CTT,CTTT
FOXP1
9348414
chr6 134264784 rs372069744 C CTT,CTTT
FOXP1
9348415
chr6 134264784 rs386408674 C CTTT
FOXP1
9348416
Genes possibly regulated by vista53570[chr6:134264415-134264799]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 134210276 134216691 + TCF21 ENSG00000118526.6 134210276 0.93 0.99 6972 45861
chr6 134273308 134311570 + TBPL1 ENSG00000028839.5 134273308 0.76 0.99 6973 91491
Expression level of Genes
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miRNAs possibly regulated by vista53570[chr6:134264415-134264799]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results