EnhancerDB
  1. Home
  2. Enhancers
  3. vista53571[chr6:134395597-134395721]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53571[chr6:134395597-134395721]
Back to top
Tissue distribution of vista53571
Back to top
Transcription factor that possibly regulate vista53571[chr6:134395597-134395721]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 134395453 134395956 POLR2A UCSC Txn Factor no Conserved 108541672
chr6 134395622 134395628 SOX10 JASPAR yes 70437507
chr6 134395631 134395646 ZIC3 JASPAR yes 70437508
chr6 134395633 134395646 ELF1 JASPAR yes 70437509
chr6 134395634 134395646 EHF JASPAR yes 70437510
chr6 134395634 134395647 ELF3 JASPAR yes 70437511
chr6 134395635 134395646 ELF5 JASPAR yes 70437512
chr6 134395636 134395646 ERF JASPAR yes 70437513
chr6 134395636 134395646 ETV6 JASPAR yes 70437514
chr6 134395636 134395647 FLI1 JASPAR yes 70437515
chr6 134395637 134395645 EHF JASPAR yes 70437516
chr6 134395637 134395645 FEV JASPAR yes 70437517
chr6 134395638 134395645 SPI1 JASPAR yes 70437518
chr6 134395644 134395649 GATA2 JASPAR yes 70437519
chr6 134395644 134395663 RFX2 JASPAR yes 70437520
chr6 134395671 134395677 SP1 TRANSFAC yes 70437521
chr6 134395671 134395681 SP1 JASPAR yes 70437522
chr6 134395683 134395695 IRF1 JASPAR yes 70437523
chr6 134395685 134395691 TCF4 TRANSFAC yes 70437524
chr6 134395685 134395700 FOXP1 JASPAR yes 70437525
SNP sites on vista53571[chr6:134395597-134395721]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 134395650 rs190882614 G A
POLR2A RFX2
9349372
chr6 134395695 rs73554938 G T
FOXP1 IRF1 POLR2A
9349373
Genes possibly regulated by vista53571[chr6:134395597-134395721]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 134309835 134373774 - SLC2A12 ENSG00000146411.5 134373774 0.89 1.0 6974 78177
Expression level of Genes
Back to top
miRNAs possibly regulated by vista53571[chr6:134395597-134395721]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results