EnhancerDB
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  3. vista5360[chr1:226815517-226815910]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5360[chr1:226815517-226815910]
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Tissue distribution of vista5360
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Transcription factor that possibly regulate vista5360[chr1:226815517-226815910]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226815511 226815520 ZEB1 JASPAR yes 35826349
chr1 226815511 226815520 ZEB1 JASPAR yes 118471178
chr1 226815512 226815522 TCF3 JASPAR yes 35826350
chr1 226815512 226815522 TCF4 JASPAR yes 35826351
chr1 226815512 226815522 TCF3 JASPAR yes 118471179
chr1 226815512 226815522 TCF4 JASPAR yes 118471180
chr1 226815513 226815522 SNAI2 JASPAR yes 35826352
chr1 226815513 226815522 SNAI2 JASPAR yes 118471181
chr1 226815514 226815519 USF2 TRANSFAC yes 35826353
chr1 226815514 226815519 USF2 TRANSFAC yes 118471182
chr1 226815520 226815524 YY1 TRANSFAC yes 35826354
chr1 226815520 226815524 YY1 TRANSFAC yes 118471183
chr1 226815528 226815532 YY1 TRANSFAC yes 35826355
chr1 226815528 226815532 YY1 TRANSFAC yes 118471184
chr1 226815541 226815551 MEF2A JASPAR yes 35826356
chr1 226815541 226815551 MEF2A JASPAR yes 118471185
chr1 226815542 226815546 TEAD2 TRANSFAC yes 35826357
chr1 226815542 226815546 TEAD2 TRANSFAC yes 118471186
chr1 226815542 226815547 TBP TRANSFAC yes 35826358
chr1 226815542 226815547 TBP TRANSFAC yes 118471187
chr1 226815572 226815587 FOXP1 JASPAR yes 35826359
chr1 226815572 226815587 FOXP1 JASPAR yes 118471188
chr1 226815592 226815603 FOSL1 JASPAR yes 35826360
chr1 226815592 226815603 FOSL1 JASPAR yes 118471189
chr1 226815602 226815619 PAX1 JASPAR yes 35826361
chr1 226815602 226815619 PAX9 JASPAR yes 35826362
chr1 226815602 226815619 PAX1 JASPAR yes 118471190
chr1 226815602 226815619 PAX9 JASPAR yes 118471191
chr1 226815615 226815620 TFAP2A TRANSFAC yes 35826363
chr1 226815615 226815620 TFAP2A TRANSFAC yes 118471192
chr1 226815615 226815621 MZF1 JASPAR yes 35826364
chr1 226815615 226815621 MZF1 JASPAR yes 118471193
chr1 226815617 226815622 ETS2 TRANSFAC yes 35826365
chr1 226815617 226815622 ETS2 TRANSFAC yes 118471194
chr1 226815643 226815657 TLX1 JASPAR yes 35826366
chr1 226815643 226815657 TLX1 JASPAR yes 118471195
chr1 226815648 226815669 IRF1 JASPAR yes 35826367
chr1 226815648 226815669 IRF1 JASPAR yes 118471196
chr1 226815652 226815666 SPI1 JASPAR yes 35826368
chr1 226815652 226815666 SPIC JASPAR yes 35826369
chr1 226815652 226815666 SPI1 JASPAR yes 118471197
chr1 226815652 226815666 SPIC JASPAR yes 118471198
chr1 226815653 226815666 ELF1 JASPAR yes 35826370
chr1 226815653 226815666 ELF1 JASPAR yes 118471199
chr1 226815655 226815666 ELF5 JASPAR yes 35826371
chr1 226815655 226815666 ELF5 JASPAR yes 118471200
chr1 226815656 226815663 SPIB JASPAR yes 35826372
chr1 226815656 226815663 SPIB JASPAR yes 118471201
chr1 226815656 226815667 FLI1 JASPAR yes 35826373
chr1 226815656 226815667 FLI1 JASPAR yes 118471202
chr1 226815684 226815699 PRDM1 JASPAR yes 35826374
chr1 226815684 226815699 PRDM1 JASPAR yes 118471203
chr1 226815700 226815710 SP1 JASPAR yes 35826375
chr1 226815700 226815710 SP1 JASPAR yes 118471204
chr1 226815701 226815711 SP1 JASPAR yes 35826376
chr1 226815701 226815711 SP1 JASPAR yes 118471205
chr1 226815702 226815707 SP1 TRANSFAC yes 35826377
chr1 226815702 226815707 SP1 TRANSFAC yes 118471206
chr1 226815703 226815708 SP1 TRANSFAC yes 35826378
chr1 226815703 226815708 SP1 TRANSFAC yes 118471207
chr1 226815703 226815709 SP1 TRANSFAC yes 35826379
chr1 226815703 226815709 SP1 TRANSFAC yes 118471208
chr1 226815707 226815718 NFKB1 JASPAR yes 35826380
chr1 226815707 226815718 NFKB1 JASPAR yes 118471209
chr1 226815708 226815718 REL JASPAR yes 35826381
chr1 226815708 226815718 REL JASPAR yes 118471210
chr1 226815713 226815719 NFIC JASPAR yes 35826382
chr1 226815713 226815719 NFIC JASPAR yes 118471211
chr1 226815744 226815754 RELA JASPAR yes 35826383
chr1 226815744 226815754 RELA JASPAR yes 118471212
chr1 226815765 226815780 ZIC3 JASPAR yes 35826384
chr1 226815765 226815780 ZIC4 JASPAR yes 35826385
chr1 226815765 226815780 ZIC3 JASPAR yes 118471213
chr1 226815765 226815780 ZIC4 JASPAR yes 118471214
chr1 226815766 226815780 ZIC1 JASPAR yes 35826386
chr1 226815766 226815780 ZIC1 JASPAR yes 118471215
chr1 226815775 226815788 NFKB1 JASPAR yes 35826387
chr1 226815775 226815788 NFKB2 JASPAR yes 35826388
chr1 226815775 226815788 NFKB1 JASPAR yes 118471216
chr1 226815775 226815788 NFKB2 JASPAR yes 118471217
chr1 226815788 226815803 NFYB JASPAR yes 35826389
chr1 226815788 226815803 NFYB JASPAR yes 118471218
chr1 226815788 226815806 RARA JASPAR yes 35826390
chr1 226815788 226815806 RARA JASPAR yes 118471219
chr1 226815790 226815803 DUXA JASPAR yes 35826391
chr1 226815790 226815803 DUXA JASPAR yes 118471220
chr1 226815790 226815806 NFYA JASPAR yes 35826392
chr1 226815790 226815806 NFYA JASPAR yes 118471221
chr1 226815791 226815802 DUX4 JASPAR yes 35826393
chr1 226815791 226815802 DUX4 JASPAR yes 118471222
chr1 226815791 226815809 NFYA JASPAR yes 35826394
chr1 226815791 226815809 NFYA JASPAR yes 118471223
chr1 226815795 226815799 H1TF2 TRANSFAC yes 35826395
chr1 226815795 226815799 NFE TRANSFAC yes 35826396
chr1 226815795 226815799 SRF TRANSFAC yes 35826397
chr1 226815795 226815799 H1TF2 TRANSFAC yes 118471224
chr1 226815795 226815799 NFE TRANSFAC yes 118471225
chr1 226815795 226815799 SRF TRANSFAC yes 118471226
chr1 226815800 226815814 GLIS3 JASPAR yes 35826398
chr1 226815800 226815814 GLIS3 JASPAR yes 118471227
chr1 226815803 226815824 ZNF263 JASPAR yes 35826399
chr1 226815803 226815824 ZNF263 JASPAR yes 118471228
chr1 226815812 226815816 H4TF2 TRANSFAC yes 35826400
chr1 226815812 226815816 H4TF2 TRANSFAC yes 118471229
chr1 226815824 226815834 NEUROG2 JASPAR yes 35826401
chr1 226815824 226815834 NEUROG2 JASPAR yes 118471230
chr1 226815846 226815857 DUX4 JASPAR yes 35826402
chr1 226815846 226815857 DUX4 JASPAR yes 118471231
chr1 226815859 226815869 ZNF740 JASPAR yes 35826403
chr1 226815859 226815869 ZNF740 JASPAR yes 118471232
chr1 226815883 226815888 GATA2 JASPAR yes 35826404
chr1 226815883 226815888 GATA2 JASPAR yes 118471233
chr1 226815885 226815891 MZF1 JASPAR yes 35826405
chr1 226815885 226815891 MZF1 JASPAR yes 118471234
chr1 226815886 226815906 RREB1 JASPAR yes 35826406
chr1 226815886 226815906 RREB1 JASPAR yes 118471235
chr1 226815888 226815908 RREB1 JASPAR yes 35826407
chr1 226815888 226815908 RREB1 JASPAR yes 118471236
chr1 226815888 226815909 ZNF263 JASPAR yes 35826408
chr1 226815888 226815909 ZNF263 JASPAR yes 118471237
chr1 226815890 226815900 SP1 JASPAR yes 35826409
chr1 226815890 226815900 SP1 JASPAR yes 118471238
chr1 226815890 226815910 RREB1 JASPAR yes 35826410
chr1 226815890 226815910 RREB1 JASPAR yes 118471239
chr1 226815891 226815911 RREB1 JASPAR yes 35826411
chr1 226815891 226815911 RREB1 JASPAR yes 118471240
chr1 226815894 226815914 RREB1 JASPAR yes 35826412
chr1 226815894 226815914 RREB1 JASPAR yes 118471241
SNP sites on vista5360[chr1:226815517-226815910]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226815739 rs561534104 T A no 993252
chr1 226815824 rs550148835 C T
NEUROG2 ZNF263
993253
chr1 226815840 rs565324197 C A,T no 993254
chr1 226815904 rs57469347 TC T
RREB1 ZNF263
993255
chr1 226815904 rs762850396 TC T
RREB1 ZNF263
993256
Genes possibly regulated by vista5360[chr1:226815517-226815910]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226736501 226796915 + C1orf95 ENSG00000203685.5 226736501 0.9 0.94 1901 20984
Expression level of Genes
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miRNAs possibly regulated by vista5360[chr1:226815517-226815910]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results