EnhancerDB
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  3. vista53623[chr6:135171035-135171388]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53623[chr6:135171035-135171388]
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Tissue distribution of vista53623
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Transcription factor that possibly regulate vista53623[chr6:135171035-135171388]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 135171038 135171042 YY1 TRANSFAC yes 70440428
chr6 135171038 135171042 YY1 TRANSFAC yes 105486679
chr6 135171054 135171057 MYB TRANSFAC yes 70440429
chr6 135171054 135171057 MYB TRANSFAC yes 105486680
chr6 135171055 135171069 NR2F1 JASPAR yes 70440430
chr6 135171055 135171069 NR2F1 JASPAR yes 105486681
chr6 135171059 135171069 RORA JASPAR yes 70440431
chr6 135171059 135171069 RORA JASPAR yes 105486682
chr6 135171061 135171079 ESR2 JASPAR yes 70440432
chr6 135171061 135171079 ESR2 JASPAR yes 105486683
chr6 135171062 135171070 NR4A2 JASPAR yes 70440433
chr6 135171062 135171070 NR4A2 JASPAR yes 105486684
chr6 135171063 135171078 ESR2 JASPAR yes 70440434
chr6 135171063 135171078 ESR2 JASPAR yes 105486685
chr6 135171063 135171083 ESR1 JASPAR yes 70440435
chr6 135171063 135171083 ESR1 JASPAR yes 105486686
chr6 135171064 135171068 ESR1 TRANSFAC yes 70440436
chr6 135171064 135171068 ESR1 TRANSFAC yes 105486687
chr6 135171079 135171091 PKNOX1 JASPAR yes 70440437
chr6 135171079 135171091 PKNOX2 JASPAR yes 70440438
chr6 135171079 135171091 TGIF1 JASPAR yes 70440439
chr6 135171079 135171091 TGIF2 JASPAR yes 70440440
chr6 135171079 135171091 PKNOX1 JASPAR yes 105486688
chr6 135171079 135171091 PKNOX2 JASPAR yes 105486689
chr6 135171079 135171091 TGIF1 JASPAR yes 105486690
chr6 135171079 135171091 TGIF2 JASPAR yes 105486691
chr6 135171080 135171090 MSC JASPAR yes 70440441
chr6 135171080 135171090 MYF6 JASPAR yes 70440442
chr6 135171080 135171090 MSC JASPAR yes 105486692
chr6 135171080 135171090 MYF6 JASPAR yes 105486693
chr6 135171086 135171092 NFIC JASPAR yes 70440443
chr6 135171086 135171092 NFIC JASPAR yes 105486694
chr6 135171088 135171092 H1TF2 TRANSFAC yes 70440444
chr6 135171088 135171092 NFE TRANSFAC yes 70440445
chr6 135171088 135171092 SRF TRANSFAC yes 70440446
chr6 135171088 135171092 H1TF2 TRANSFAC yes 105486695
chr6 135171088 135171092 NFE TRANSFAC yes 105486696
chr6 135171088 135171092 SRF TRANSFAC yes 105486697
chr6 135171092 135171103 CEBPB JASPAR yes 70440447
chr6 135171092 135171103 CEBPB JASPAR yes 105486698
chr6 135171092 135171105 ATF4 JASPAR yes 70440448
chr6 135171092 135171105 ATF4 JASPAR yes 105486699
chr6 135171093 135171104 CEBPA JASPAR yes 70440449
chr6 135171093 135171104 CEBPA JASPAR yes 105486700
chr6 135171108 135171117 NFIX JASPAR yes 70440450
chr6 135171108 135171117 NFIX JASPAR yes 105486701
chr6 135171108 135171118 NFIA JASPAR yes 70440451
chr6 135171108 135171118 NFIA JASPAR yes 105486702
chr6 135171110 135171116 NFIC JASPAR yes 70440452
chr6 135171110 135171116 NFIC JASPAR yes 105486703
chr6 135171126 135171137 E2F6 JASPAR yes 70440453
chr6 135171126 135171137 E2F6 JASPAR yes 105486704
chr6 135171159 135171175 ZNF143 JASPAR yes 70440454
chr6 135171159 135171175 ZNF143 JASPAR yes 105486705
chr6 135171175 135171193 NFYA JASPAR yes 70440455
chr6 135171175 135171193 NFYA JASPAR yes 105486706
chr6 135171178 135171194 SOX8 JASPAR yes 70440456
chr6 135171178 135171194 SOX8 JASPAR yes 105486707
chr6 135171179 135171183 H1TF2 TRANSFAC yes 70440457
chr6 135171179 135171183 NFE TRANSFAC yes 70440458
chr6 135171179 135171183 SRF TRANSFAC yes 70440459
chr6 135171179 135171183 H1TF2 TRANSFAC yes 105486708
chr6 135171179 135171183 NFE TRANSFAC yes 105486709
chr6 135171179 135171183 SRF TRANSFAC yes 105486710
chr6 135171194 135171207 ZBTB18 JASPAR yes 70440460
chr6 135171194 135171207 ZBTB18 JASPAR yes 105486711
chr6 135171195 135171205 FIGLA JASPAR yes 70440461
chr6 135171195 135171205 ID4 JASPAR yes 70440462
chr6 135171195 135171205 MSC JASPAR yes 70440463
chr6 135171195 135171205 TCF3 JASPAR yes 70440464
chr6 135171195 135171205 TCF4 JASPAR yes 70440465
chr6 135171195 135171205 FIGLA JASPAR yes 105486712
chr6 135171195 135171205 ID4 JASPAR yes 105486713
chr6 135171195 135171205 MSC JASPAR yes 105486714
chr6 135171195 135171205 TCF3 JASPAR yes 105486715
chr6 135171195 135171205 TCF4 JASPAR yes 105486716
chr6 135171196 135171205 SNAI2 JASPAR yes 70440466
chr6 135171196 135171205 SNAI2 JASPAR yes 105486717
chr6 135171197 135171202 USF2 TRANSFAC yes 70440467
chr6 135171197 135171202 USF2 TRANSFAC yes 105486718
chr6 135171197 135171211 PLAG1 JASPAR yes 70440468
chr6 135171197 135171211 PLAG1 JASPAR yes 105486719
chr6 135171224 135171242 ESR2 JASPAR yes 70440469
chr6 135171224 135171242 ESR2 JASPAR yes 105486720
chr6 135171237 135171251 BATF3 JASPAR yes 70440470
chr6 135171237 135171251 BATF3 JASPAR yes 105486721
chr6 135171238 135171250 JDP2 JASPAR yes 70440471
chr6 135171238 135171250 JDP2 JASPAR yes 105486722
chr6 135171240 135171245 ATF1 TRANSFAC yes 70440472
chr6 135171240 135171245 ATF1 TRANSFAC yes 105486723
chr6 135171240 135171248 CREB1 JASPAR yes 70440473
chr6 135171240 135171248 CREB1 JASPAR yes 105486724
chr6 135171241 135171253 CREB1 JASPAR yes 70440474
chr6 135171241 135171253 CREB1 JASPAR yes 105486725
chr6 135171242 135171247 ATF1 TRANSFAC yes 70440475
chr6 135171242 135171247 ATF1 TRANSFAC yes 105486726
chr6 135171256 135171262 YY1 JASPAR yes 70440476
chr6 135171256 135171262 YY1 JASPAR yes 105486727
chr6 135171272 135171277 SP1 TRANSFAC yes 70440477
chr6 135171272 135171277 SP1 TRANSFAC yes 105486728
chr6 135171286 135171300 POU1F1 JASPAR yes 70440478
chr6 135171286 135171300 POU1F1 JASPAR yes 105486729
chr6 135171287 135171299 POU3F1 JASPAR yes 70440479
chr6 135171287 135171299 POU3F2 JASPAR yes 70440480
chr6 135171287 135171299 POU3F1 JASPAR yes 105486730
chr6 135171287 135171299 POU3F2 JASPAR yes 105486731
chr6 135171292 135171305 NR2F1 JASPAR yes 70440481
chr6 135171292 135171305 NR2F1 JASPAR yes 105486732
chr6 135171294 135171305 ESRRA JASPAR yes 70440482
chr6 135171294 135171305 ESRRB JASPAR yes 70440483
chr6 135171294 135171305 ESRRA JASPAR yes 105486733
chr6 135171294 135171305 ESRRB JASPAR yes 105486734
chr6 135171300 135171306 TCF4 TRANSFAC yes 70440484
chr6 135171300 135171306 TCF4 TRANSFAC yes 105486735
chr6 135171319 135171328 NFIX JASPAR yes 70440485
chr6 135171319 135171328 NFIX JASPAR yes 105486736
chr6 135171321 135171327 NFIC JASPAR yes 70440486
chr6 135171321 135171327 NFIC JASPAR yes 105486737
chr6 135171331 135171345 RORA JASPAR yes 70440487
chr6 135171331 135171345 RORA JASPAR yes 105486738
chr6 135171332 135171347 ESR2 JASPAR yes 70440488
chr6 135171332 135171347 ESR2 JASPAR yes 105486739
chr6 135171336 135171354 ESR2 JASPAR yes 70440489
chr6 135171336 135171354 ESR2 JASPAR yes 105486740
chr6 135171337 135171343 ESR1 TRANSFAC yes 70440490
chr6 135171337 135171343 ESR1 TRANSFAC yes 105486741
chr6 135171337 135171354 ESR1 JASPAR yes 70440491
chr6 135171337 135171354 ESR1 JASPAR yes 105486742
chr6 135171338 135171353 ESR2 JASPAR yes 70440492
chr6 135171338 135171353 ESR2 JASPAR yes 105486743
chr6 135171338 135171355 RARA JASPAR yes 70440493
chr6 135171338 135171355 RARA JASPAR yes 105486744
chr6 135171339 135171343 ESR1 TRANSFAC yes 70440494
chr6 135171339 135171343 ESR1 TRANSFAC yes 105486745
chr6 135171350 135171370 TBX19 JASPAR yes 70440495
chr6 135171350 135171370 TBX19 JASPAR yes 105486746
chr6 135171352 135171368 T JASPAR yes 70440496
chr6 135171352 135171368 T JASPAR yes 105486747
chr6 135171355 135171367 TEAD1 JASPAR yes 70440497
chr6 135171355 135171367 TEAD1 JASPAR yes 105486748
SNP sites on vista53623[chr6:135171035-135171388]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 135171062 rs144524507 T C
ESR2 NR2F1 NR4A2 RORA
9356343
chr6 135171146 rs760661 T A,G no 9356344
chr6 135171162 rs556862835 G A
ZNF143
9356345
chr6 135171186 rs148485055 T A
NFYA SOX8
9356346
chr6 135171202 rs80175567 T C
FIGLA ID4 MSC PLAG1 SNAI2 TCF3 TCF4 USF2 ZBTB18
9356347
chr6 135171217 rs571098044 T C no 9356348
chr6 135171228 rs142658784 G A
ESR2
9356349
chr6 135171263 rs737153 A C no 9356350
Genes possibly regulated by vista53623[chr6:135171035-135171388]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 135238528 135271260 - ALDH8A1 ENSG00000118514.9 135271260 0.98 1.0 6976 128
Expression level of Genes
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miRNAs possibly regulated by vista53623[chr6:135171035-135171388]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results