EnhancerDB
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  3. vista53627[chr6:135346100-135346282]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53627[chr6:135346100-135346282]
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Tissue distribution of vista53627
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Transcription factor that possibly regulate vista53627[chr6:135346100-135346282]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 135346125 135346136 NFE2L2 JASPAR yes 70440571
chr6 135346128 135346145 ZNF410 JASPAR yes 70440572
chr6 135346131 135346143 HNF1B JASPAR yes 70440573
chr6 135346184 135346189 MYC TRANSFAC yes 70440574
chr6 135346198 135346203 GATA1 TRANSFAC yes 70440575
chr6 135346208 135346211 MYB TRANSFAC yes 70440576
chr6 135346208 135346220 HES5 JASPAR yes 70440577
chr6 135346213 135346224 ESRRA JASPAR yes 70440578
chr6 135346219 135346229 NFATC3 JASPAR yes 70440579
chr6 135346221 135346228 NFATC2 JASPAR yes 70440580
chr6 135346246 135346250 H1TF2 TRANSFAC yes 70440581
chr6 135346246 135346250 NFE TRANSFAC yes 70440582
chr6 135346246 135346250 SRF TRANSFAC yes 70440583
chr6 135346250 135346256 TCF4 TRANSFAC yes 70440584
chr6 135346263 135346267 NFE TRANSFAC yes 70440585
chr6 135346264 135346269 GATA2 JASPAR yes 70440586
chr6 135346268 135346272 H1TF2 TRANSFAC yes 70440587
chr6 135346268 135346272 NFE TRANSFAC yes 70440588
chr6 135346268 135346272 SRF TRANSFAC yes 70440589
SNP sites on vista53627[chr6:135346100-135346282]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 135346168 rs141408639 A C no 9357374
chr6 135346196 rs114601260 G C,T no 9357375
Genes possibly regulated by vista53627[chr6:135346100-135346282]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 135238528 135271260 - ALDH8A1 ENSG00000118514.9 135271260 0.98 1.0 6976 25160
chr6 135281516 135424194 - HBS1L ENSG00000112339.10 135424194 0.81 0.99 6977 22088
Expression level of Genes
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miRNAs possibly regulated by vista53627[chr6:135346100-135346282]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results