EnhancerDB
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  3. vista53643[chr6:135859214-135859375]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53643[chr6:135859214-135859375]
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Tissue distribution of vista53643
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Transcription factor that possibly regulate vista53643[chr6:135859214-135859375]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 135859212 135859217 MYC TRANSFAC yes 70441150
chr6 135859212 135859217 MYC TRANSFAC yes 105528209
chr6 135859224 135859238 GATA2 JASPAR yes 70441151
chr6 135859224 135859238 GATA2 JASPAR yes 105528210
chr6 135859226 135859234 GATA3 JASPAR yes 70441152
chr6 135859226 135859234 GATA5 JASPAR yes 70441153
chr6 135859226 135859234 GATA3 JASPAR yes 105528211
chr6 135859226 135859234 GATA5 JASPAR yes 105528212
chr6 135859230 135859245 AR JASPAR yes 70441154
chr6 135859230 135859245 AR JASPAR yes 105528213
chr6 135859238 135859254 SOX4 JASPAR yes 70441155
chr6 135859238 135859254 SOX4 JASPAR yes 105528214
chr6 135859250 135859261 CEBPB JASPAR yes 70441156
chr6 135859250 135859261 CEBPB JASPAR yes 105528215
chr6 135859250 135859263 ATF4 JASPAR yes 70441157
chr6 135859250 135859263 ATF4 JASPAR yes 105528216
chr6 135859251 135859262 CEBPA JASPAR yes 70441158
chr6 135859251 135859262 CEBPA JASPAR yes 105528217
chr6 135859251 135859264 JUN JASPAR yes 70441159
chr6 135859251 135859264 JUN JASPAR yes 105528218
chr6 135859277 135859287 ZNF740 JASPAR yes 70441160
chr6 135859277 135859287 ZNF740 JASPAR yes 105528219
chr6 135859279 135859299 RREB1 JASPAR yes 70441161
chr6 135859279 135859299 RREB1 JASPAR yes 105528220
chr6 135859281 135859291 SP1 JASPAR yes 70441162
chr6 135859281 135859291 SP1 JASPAR yes 105528221
chr6 135859288 135859298 TFAP4 JASPAR yes 70441163
chr6 135859288 135859298 TFAP4 JASPAR yes 105528222
chr6 135859293 135859297 NFE TRANSFAC yes 70441164
chr6 135859293 135859297 NFE TRANSFAC yes 105528223
chr6 135859336 135859341 GATA1 TRANSFAC yes 70441165
chr6 135859336 135859341 GATA1 TRANSFAC yes 105528224
chr6 135859353 135859363 SMAD3 JASPAR yes 70441166
chr6 135859353 135859363 SMAD3 JASPAR yes 105528225
chr6 135859358 135859370 PKNOX2 JASPAR yes 70441167
chr6 135859358 135859370 PKNOX2 JASPAR yes 105528226
chr6 135859363 135859371 MEIS2 JASPAR yes 70441168
chr6 135859363 135859371 MEIS3 JASPAR yes 70441169
chr6 135859363 135859371 MEIS2 JASPAR yes 105528227
chr6 135859363 135859371 MEIS3 JASPAR yes 105528228
chr6 135859364 135859368 NFE TRANSFAC yes 70441170
chr6 135859364 135859368 NFE TRANSFAC yes 105528229
chr6 135859370 135859382 PROX1 JASPAR yes 70441171
chr6 135859370 135859382 PROX1 JASPAR yes 105528230
chr6 135859375 135859395 RREB1 JASPAR yes 70441172
chr6 135859375 135859395 RREB1 JASPAR yes 105528231
SNP sites on vista53643[chr6:135859214-135859375]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 135859295 rs377755601 T C
NFE RREB1 TFAP4
9359975
chr6 135859361 rs186783128 G A
PKNOX2 SMAD3
9359976
Genes possibly regulated by vista53643[chr6:135859214-135859375]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 135604670 135818914 - AHI1 ENSG00000135541.16 135818914 0.86 1.0 6979 59700
Expression level of Genes
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miRNAs possibly regulated by vista53643[chr6:135859214-135859375]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results