EnhancerDB
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  3. vista53690[chr6:137310723-137310892]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53690[chr6:137310723-137310892]
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Tissue distribution of vista53690
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Transcription factor that possibly regulate vista53690[chr6:137310723-137310892]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 137310717 137310727 HOXA13 JASPAR yes 70443268
chr6 137310717 137310727 HOXB13 JASPAR yes 70443269
chr6 137310717 137310727 HOXA13 JASPAR yes 105611911
chr6 137310717 137310727 HOXB13 JASPAR yes 105611912
chr6 137310720 137310730 MZF1 JASPAR yes 70443270
chr6 137310720 137310730 MZF1 JASPAR yes 105611913
chr6 137310723 137310728 TFAP2A TRANSFAC yes 70443271
chr6 137310723 137310728 TFAP2A TRANSFAC yes 105611914
chr6 137310723 137310729 MZF1 JASPAR yes 70443272
chr6 137310723 137310729 MZF1 JASPAR yes 105611915
chr6 137310727 137310735 NR4A2 JASPAR yes 70443273
chr6 137310727 137310735 NR4A2 JASPAR yes 105611916
chr6 137310729 137310733 ESR1 TRANSFAC yes 70443274
chr6 137310729 137310733 ESR1 TRANSFAC yes 105611917
chr6 137310758 137310763 SP1 TRANSFAC yes 70443275
chr6 137310758 137310763 SP1 TRANSFAC yes 105611918
chr6 137310768 137310780 ELF1 JASPAR yes 70443276
chr6 137310768 137310780 ELF4 JASPAR yes 70443277
chr6 137310768 137310780 ELF1 JASPAR yes 105611919
chr6 137310768 137310780 ELF4 JASPAR yes 105611920
chr6 137310768 137310781 ELF3 JASPAR yes 70443278
chr6 137310768 137310781 ELF3 JASPAR yes 105611921
chr6 137310769 137310780 SPDEF JASPAR yes 70443279
chr6 137310769 137310780 SPDEF JASPAR yes 105611922
chr6 137310770 137310779 ELK4 JASPAR yes 70443280
chr6 137310770 137310779 ELK4 JASPAR yes 105611923
chr6 137310770 137310780 ETV3 JASPAR yes 70443281
chr6 137310770 137310780 ETV5 JASPAR yes 70443282
chr6 137310770 137310780 ETV3 JASPAR yes 105611924
chr6 137310770 137310780 ETV5 JASPAR yes 105611925
chr6 137310777 137310787 SP1 JASPAR yes 70443283
chr6 137310777 137310787 SP1 JASPAR yes 105611926
chr6 137310801 137310818 RXRA JASPAR yes 70443284
chr6 137310801 137310818 RXRA JASPAR yes 105611927
chr6 137310812 137310829 RARA JASPAR yes 70443285
chr6 137310812 137310829 RARA JASPAR yes 105611928
chr6 137310813 137310832 REST JASPAR yes 70443286
chr6 137310813 137310832 REST JASPAR yes 105611929
chr6 137310844 137310849 SP1 TRANSFAC yes 70443287
chr6 137310844 137310849 SP1 TRANSFAC yes 105611930
chr6 137310844 137310862 ESR1 JASPAR yes 70443288
chr6 137310844 137310862 ESR1 JASPAR yes 105611931
chr6 137310845 137310865 ESR1 JASPAR yes 70443289
chr6 137310845 137310865 ESR1 JASPAR yes 105611932
SNP sites on vista53690[chr6:137310723-137310892]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 137310731 rs139079194 G T
ESR1 NR4A2
9366678
chr6 137310788 rs374664784 C T no 9366679
chr6 137310862 rs1318358 G A
ESR1
9366680
chr6 137310872 rs1775321 A G no 9366681
Genes possibly regulated by vista53690[chr6:137310723-137310892]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 137243402 137246777 + SLC35D3 ENSG00000182747.4 137243402 0.89 1.0 6986 32679
chr6 137321108 137366298 - IL20RA ENSG00000016402.8 137366298 0.81 1.0 6987 44594
Expression level of Genes
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miRNAs possibly regulated by vista53690[chr6:137310723-137310892]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results