EnhancerDB
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  3. vista53696[chr6:137487023-137487270]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53696[chr6:137487023-137487270]
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Tissue distribution of vista53696
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Transcription factor that possibly regulate vista53696[chr6:137487023-137487270]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 137486934 137487502 RELA UCSC Txn Factor no Conserved 108541810
chr6 137487158 137487548 CTCF UCSC Txn Factor no Conserved 108541811
chr6 137487190 137487482 RAD21 UCSC Txn Factor no Conserved 108541812
chr6 137487219 137487507 SMC3 UCSC Txn Factor no Conserved 108541813
chr6 137487031 137487034 MYB TRANSFAC yes 70443516
chr6 137487031 137487034 MYB TRANSFAC yes 105624221
chr6 137487034 137487046 TEAD1 JASPAR yes 70443517
chr6 137487034 137487046 TEAD1 JASPAR yes 105624222
chr6 137487065 137487078 NFKB1 JASPAR yes 70443518
chr6 137487065 137487078 NFKB1 JASPAR yes 105624223
chr6 137487067 137487077 REL JASPAR yes 70443519
chr6 137487067 137487077 REL JASPAR yes 105624224
chr6 137487081 137487084 MYB TRANSFAC yes 70443520
chr6 137487081 137487084 MYB TRANSFAC yes 105624225
chr6 137487110 137487122 GLI2 JASPAR yes 70443521
chr6 137487110 137487122 GLI2 JASPAR yes 105624226
chr6 137487135 137487140 SP1 TRANSFAC yes 70443522
chr6 137487135 137487140 SP1 TRANSFAC yes 105624227
chr6 137487145 137487156 NFKB1 JASPAR yes 70443523
chr6 137487145 137487156 NFKB1 JASPAR yes 105624228
chr6 137487146 137487156 NFKB1 JASPAR yes 70443524
chr6 137487146 137487156 RELA JASPAR yes 70443525
chr6 137487146 137487156 REL JASPAR yes 70443526
chr6 137487146 137487156 NFKB1 JASPAR yes 105624229
chr6 137487146 137487156 RELA JASPAR yes 105624230
chr6 137487146 137487156 REL JASPAR yes 105624231
chr6 137487194 137487200 ZNF354C JASPAR yes 70443527
chr6 137487194 137487200 ZNF354C JASPAR yes 105624232
chr6 137487235 137487247 SRF JASPAR yes 70443528
chr6 137487235 137487247 SRF JASPAR yes 105624233
chr6 137487245 137487258 ZBTB18 JASPAR yes 70443529
chr6 137487245 137487258 ZBTB18 JASPAR yes 105624234
chr6 137487261 137487272 NRL JASPAR yes 70443530
chr6 137487261 137487272 NRL JASPAR yes 105624235
chr6 137487262 137487268 TCF4 TRANSFAC yes 70443531
chr6 137487262 137487268 TCF4 TRANSFAC yes 105624236
SNP sites on vista53696[chr6:137487023-137487270]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 137487079 rs185867714 A G
RELA
9367820
chr6 137487134 rs138812141 A G
RELA
9367821
chr6 137487139 rs115636109 C T
RELA SP1
9367822
chr6 137487148 rs377650239 G T
NFKB1 REL RELA
9367823
Genes possibly regulated by vista53696[chr6:137487023-137487270]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 137464968 137494785 - IL22RA2 ENSG00000164485.10 137494785 0.95 0.98 6988 92485
chr6 137518621 137540586 - IFNGR1 ENSG00000027697.8 137540586 0.82 0.99 6989 46684
Expression level of Genes
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miRNAs possibly regulated by vista53696[chr6:137487023-137487270]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results