EnhancerDB
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  3. vista537[chr1:16826315-16826438]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista537[chr1:16826315-16826438]
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Tissue distribution of vista537
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Transcription factor that possibly regulate vista537[chr1:16826315-16826438]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 16826318 16826322 NFE TRANSFAC yes 27047130
chr1 16826318 16826322 NFE TRANSFAC yes 118239583
chr1 16826336 16826347 DMRT3 JASPAR yes 27047131
chr1 16826336 16826347 DMRT3 JASPAR yes 118239584
chr1 16826338 16826355 NR3C2 JASPAR yes 27047132
chr1 16826338 16826355 NR3C2 JASPAR yes 118239585
chr1 16826340 16826343 MYB TRANSFAC yes 27047133
chr1 16826340 16826343 MYB TRANSFAC yes 118239586
chr1 16826342 16826352 OLIG1 JASPAR yes 27047134
chr1 16826342 16826352 OLIG2 JASPAR yes 27047135
chr1 16826342 16826352 OLIG3 JASPAR yes 27047136
chr1 16826342 16826352 OLIG1 JASPAR yes 118239587
chr1 16826342 16826352 OLIG2 JASPAR yes 118239588
chr1 16826342 16826352 OLIG3 JASPAR yes 118239589
chr1 16826342 16826354 TAL1 JASPAR yes 27047137
chr1 16826342 16826354 TAL1 JASPAR yes 118239590
chr1 16826356 16826368 ZBTB7B JASPAR yes 27047138
chr1 16826356 16826368 ZBTB7C JASPAR yes 27047139
chr1 16826356 16826368 ZBTB7B JASPAR yes 118239591
chr1 16826356 16826368 ZBTB7C JASPAR yes 118239592
chr1 16826376 16826391 ZIC3 JASPAR yes 27047140
chr1 16826376 16826391 ZIC3 JASPAR yes 118239593
chr1 16826390 16826395 MYB TRANSFAC yes 27047141
chr1 16826390 16826395 MYB TRANSFAC yes 118239594
chr1 16826410 16826431 IRF1 JASPAR yes 27047142
chr1 16826410 16826431 IRF1 JASPAR yes 118239595
chr1 16826413 16826427 SPI1 JASPAR yes 27047143
chr1 16826413 16826427 SPI1 JASPAR yes 118239596
chr1 16826413 16826434 IRF1 JASPAR yes 27047144
chr1 16826413 16826434 IRF1 JASPAR yes 118239597
chr1 16826414 16826435 IRF1 JASPAR yes 27047145
chr1 16826414 16826435 IRF1 JASPAR yes 118239598
chr1 16826415 16826436 IRF1 JASPAR yes 27047146
chr1 16826415 16826436 IRF1 JASPAR yes 118239599
chr1 16826416 16826431 FOXP1 JASPAR yes 27047147
chr1 16826416 16826431 FOXP1 JASPAR yes 118239600
chr1 16826416 16826437 IRF1 JASPAR yes 27047148
chr1 16826416 16826437 IRF1 JASPAR yes 118239601
chr1 16826418 16826433 FOXP1 JASPAR yes 27047149
chr1 16826418 16826433 FOXP1 JASPAR yes 118239602
chr1 16826419 16826434 FOXP1 JASPAR yes 27047150
chr1 16826419 16826434 FOXP1 JASPAR yes 118239603
chr1 16826420 16826435 FOXP1 JASPAR yes 27047151
chr1 16826420 16826435 FOXP1 JASPAR yes 118239604
chr1 16826421 16826436 FOXP1 JASPAR yes 27047152
chr1 16826421 16826436 FOXP1 JASPAR yes 118239605
chr1 16826422 16826437 FOXP1 JASPAR yes 27047153
chr1 16826422 16826437 FOXP1 JASPAR yes 118239606
chr1 16826423 16826438 FOXP1 JASPAR yes 27047154
chr1 16826423 16826438 FOXP1 JASPAR yes 118239607
chr1 16826424 16826439 FOXP1 JASPAR yes 27047155
chr1 16826424 16826439 FOXP1 JASPAR yes 118239608
SNP sites on vista537[chr1:16826315-16826438]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 16826325 rs190105228 C T no 112516
Genes possibly regulated by vista537[chr1:16826315-16826438]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 16713612 16763919 - SPATA21 ENSG00000187144.7 16763919 0.91 1.0 231 37604
chr1 16767167 16786573 + NECAP2 ENSG00000157191.15 16767167 0.64 0.99 232 40852
chr1 16865561 16866070 + AL355149.2 ENSG00000268674.1 16865561 0.0 0.0 233 60877
Expression level of Genes
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miRNAs possibly regulated by vista537[chr1:16826315-16826438]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results