EnhancerDB
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  3. vista5373[chr1:226867069-226867278]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5373[chr1:226867069-226867278]
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Tissue distribution of vista5373
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Transcription factor that possibly regulate vista5373[chr1:226867069-226867278]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226867111 226867121 NOTO JASPAR yes 35831946
chr1 226867111 226867121 NOTO JASPAR yes 118471971
chr1 226867118 226867129 NFKB1 JASPAR yes 35831947
chr1 226867118 226867129 NFKB1 JASPAR yes 118471972
chr1 226867119 226867129 RELA JASPAR yes 35831948
chr1 226867119 226867129 REL JASPAR yes 35831949
chr1 226867119 226867129 RELA JASPAR yes 118471973
chr1 226867119 226867129 REL JASPAR yes 118471974
chr1 226867146 226867150 NFE TRANSFAC yes 35831950
chr1 226867146 226867150 NFE TRANSFAC yes 118471975
chr1 226867162 226867172 NFATC3 JASPAR yes 35831951
chr1 226867162 226867172 NFATC3 JASPAR yes 118471976
chr1 226867172 226867187 RUNX2 JASPAR yes 35831952
chr1 226867172 226867187 RUNX2 JASPAR yes 118471977
chr1 226867173 226867176 MYB TRANSFAC yes 35831953
chr1 226867173 226867176 MYB TRANSFAC yes 118471978
chr1 226867173 226867183 RUNX3 JASPAR yes 35831954
chr1 226867173 226867183 RUNX3 JASPAR yes 118471979
chr1 226867173 226867184 RUNX1 JASPAR yes 35831955
chr1 226867173 226867184 RUNX1 JASPAR yes 118471980
chr1 226867195 226867199 NFE TRANSFAC yes 35831956
chr1 226867195 226867199 NFE TRANSFAC yes 118471981
chr1 226867195 226867200 GATA1 TRANSFAC yes 35831957
chr1 226867195 226867200 GATA1 TRANSFAC yes 118471982
chr1 226867195 226867201 GATA3 JASPAR yes 35831958
chr1 226867195 226867201 GATA3 JASPAR yes 118471983
chr1 226867224 226867229 GATA2 JASPAR yes 35831959
chr1 226867224 226867229 GATA2 JASPAR yes 118471984
chr1 226867228 226867243 MEF2C JASPAR yes 35831960
chr1 226867228 226867243 MEF2C JASPAR yes 118471985
chr1 226867233 226867251 MAFF JASPAR yes 35831961
chr1 226867233 226867251 MAFF JASPAR yes 118471986
chr1 226867235 226867250 MAFK JASPAR yes 35831962
chr1 226867235 226867250 MAFK JASPAR yes 118471987
chr1 226867249 226867254 TFAP2A TRANSFAC yes 35831963
chr1 226867249 226867254 TFAP2A TRANSFAC yes 118471988
chr1 226867249 226867255 MZF1 JASPAR yes 35831964
chr1 226867249 226867255 MZF1 JASPAR yes 118471989
chr1 226867256 226867259 MYB TRANSFAC yes 35831965
chr1 226867256 226867259 MYB TRANSFAC yes 118471990
SNP sites on vista5373[chr1:226867069-226867278]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226867136 rs143266236 TTG T no 993787
chr1 226867161 rs367702002 A G no 993788
chr1 226867197 rs144331260 T C
GATA1 GATA3 NFE
993789
chr1 226867268 rs7517463 G C no 993790
Genes possibly regulated by vista5373[chr1:226867069-226867278]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226819391 226927024 - ITPKB ENSG00000143772.5 226927024 0.8 0.99 1902 40254
Expression level of Genes
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miRNAs possibly regulated by vista5373[chr1:226867069-226867278]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results