EnhancerDB
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  3. vista53775[chr6:138230089-138230240]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53775[chr6:138230089-138230240]
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Tissue distribution of vista53775
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Transcription factor that possibly regulate vista53775[chr6:138230089-138230240]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 138229845 138230302 RELA UCSC Txn Factor no Conserved 108541915
chr6 138229862 138230288 NFIC UCSC Txn Factor no Conserved 108541916
chr6 138229918 138230234 EBF1 UCSC Txn Factor no Conserved 108541917
chr6 138229926 138230243 RUNX3 UCSC Txn Factor no Conserved 108541918
chr6 138229930 138230191 MEF2A UCSC Txn Factor no Conserved 108541919
chr6 138229946 138230193 MEF2C UCSC Txn Factor no Conserved 108541920
chr6 138230107 138230122 NR2C2 JASPAR yes 70448363
chr6 138230107 138230122 NR2C2 JASPAR yes 105690199
chr6 138230111 138230125 SPIC JASPAR yes 70448364
chr6 138230111 138230125 SPIC JASPAR yes 105690200
chr6 138230119 138230130 STAT3 JASPAR yes 70448365
chr6 138230119 138230130 STAT3 JASPAR yes 105690201
chr6 138230123 138230134 NFKB1 JASPAR yes 70448366
chr6 138230123 138230134 NFKB1 JASPAR yes 105690202
chr6 138230124 138230129 ETS2 TRANSFAC yes 70448367
chr6 138230124 138230129 ETS2 TRANSFAC yes 105690203
chr6 138230135 138230146 GCM1 JASPAR yes 70448368
chr6 138230135 138230146 GCM1 JASPAR yes 105690204
chr6 138230136 138230146 GCM2 JASPAR yes 70448369
chr6 138230136 138230146 GCM2 JASPAR yes 105690205
chr6 138230180 138230190 RELA JASPAR yes 70448370
chr6 138230180 138230190 REL JASPAR yes 70448371
chr6 138230180 138230190 RELA JASPAR yes 105690206
chr6 138230180 138230190 REL JASPAR yes 105690207
chr6 138230180 138230191 NFKB1 JASPAR yes 70448372
chr6 138230180 138230191 NFKB1 JASPAR yes 105690208
chr6 138230186 138230191 ETS2 TRANSFAC yes 70448373
chr6 138230186 138230191 ETS2 TRANSFAC yes 105690209
chr6 138230210 138230213 MYB TRANSFAC yes 70448374
chr6 138230210 138230213 MYB TRANSFAC yes 105690210
chr6 138230212 138230224 HLF JASPAR yes 70448375
chr6 138230212 138230224 HLF JASPAR yes 105690211
chr6 138230213 138230223 CEBPB JASPAR yes 70448376
chr6 138230213 138230223 CEBPD JASPAR yes 70448377
chr6 138230213 138230223 CEBPE JASPAR yes 70448378
chr6 138230213 138230223 CEBPG JASPAR yes 70448379
chr6 138230213 138230223 CEBPB JASPAR yes 105690212
chr6 138230213 138230223 CEBPD JASPAR yes 105690213
chr6 138230213 138230223 CEBPE JASPAR yes 105690214
chr6 138230213 138230223 CEBPG JASPAR yes 105690215
chr6 138230225 138230228 MYB TRANSFAC yes 70448380
chr6 138230225 138230228 MYB TRANSFAC yes 105690216
chr6 138230235 138230239 YY1 TRANSFAC yes 70448381
chr6 138230235 138230239 YY1 TRANSFAC yes 105690217
SNP sites on vista53775[chr6:138230089-138230240]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 138230145 rs5880365 T TGA
EBF1 GCM1 GCM2 MEF2A MEF2C NFIC RELA RUNX3
9373813
chr6 138230178 rs76907765 A G
EBF1 MEF2A MEF2C NFIC RELA RUNX3
9373814
Genes possibly regulated by vista53775[chr6:138230089-138230240]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 138188351 138204449 + TNFAIP3 ENSG00000118503.10 138188351 0.77 0.98 6991 58262
Expression level of Genes
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miRNAs possibly regulated by vista53775[chr6:138230089-138230240]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results