EnhancerDB
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  3. vista5378[chr1:226875915-226876346]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5378[chr1:226875915-226876346]
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Tissue distribution of vista5378
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Transcription factor that possibly regulate vista5378[chr1:226875915-226876346]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226875910 226875923 TFAP2A JASPAR yes 35833163
chr1 226875910 226875923 TFAP2B JASPAR yes 35833164
chr1 226875910 226875923 TFAP2C JASPAR yes 35833165
chr1 226875910 226875923 TFAP2A JASPAR yes 118472271
chr1 226875910 226875923 TFAP2B JASPAR yes 118472272
chr1 226875910 226875923 TFAP2C JASPAR yes 118472273
chr1 226875911 226875922 EBF1 JASPAR yes 35833166
chr1 226875911 226875922 EBF1 JASPAR yes 118472274
chr1 226875916 226875931 HSF1 JASPAR yes 35833167
chr1 226875916 226875931 HSF1 JASPAR yes 118472275
chr1 226875917 226875930 HSF1 JASPAR yes 35833168
chr1 226875917 226875930 HSF2 JASPAR yes 35833169
chr1 226875917 226875930 HSF4 JASPAR yes 35833170
chr1 226875917 226875930 HSF1 JASPAR yes 118472276
chr1 226875917 226875930 HSF2 JASPAR yes 118472277
chr1 226875917 226875930 HSF4 JASPAR yes 118472278
chr1 226875919 226875934 STAT1 JASPAR yes 35833171
chr1 226875919 226875934 STAT1 JASPAR yes 118472279
chr1 226875921 226875932 STAT1 JASPAR yes 35833172
chr1 226875921 226875932 STAT1 JASPAR yes 118472280
chr1 226875950 226875960 NHLH1 JASPAR yes 35833173
chr1 226875950 226875960 NHLH1 JASPAR yes 118472281
chr1 226875954 226875972 SRF JASPAR yes 35833174
chr1 226875954 226875972 SRF JASPAR yes 118472282
chr1 226875956 226875971 MEF2A JASPAR yes 35833175
chr1 226875956 226875971 MEF2A JASPAR yes 118472283
chr1 226875956 226875972 SRF JASPAR yes 35833176
chr1 226875956 226875972 SRF JASPAR yes 118472284
chr1 226875956 226875974 SRF JASPAR yes 35833177
chr1 226875956 226875974 SRF JASPAR yes 118472285
chr1 226875957 226875969 SRF JASPAR yes 35833178
chr1 226875957 226875969 SRF JASPAR yes 118472286
chr1 226875958 226875970 MEF2B JASPAR yes 35833179
chr1 226875958 226875970 MEF2B JASPAR yes 118472287
chr1 226875959 226875969 MEF2A JASPAR yes 35833180
chr1 226875959 226875969 MEF2A JASPAR yes 118472288
chr1 226875959 226875971 SRF JASPAR yes 35833181
chr1 226875959 226875971 SRF JASPAR yes 118472289
chr1 226875966 226875978 PKNOX1 JASPAR yes 35833182
chr1 226875966 226875978 PKNOX2 JASPAR yes 35833183
chr1 226875966 226875978 PKNOX1 JASPAR yes 118472290
chr1 226875966 226875978 PKNOX2 JASPAR yes 118472291
chr1 226875976 226875987 GCM1 JASPAR yes 35833184
chr1 226875976 226875987 GCM1 JASPAR yes 118472292
chr1 226875990 226876003 POU2F2 JASPAR yes 35833185
chr1 226875990 226876003 POU2F2 JASPAR yes 118472293
chr1 226875993 226875999 TCF4 TRANSFAC yes 35833186
chr1 226875993 226875999 TCF4 TRANSFAC yes 118472294
chr1 226876001 226876009 PAX4 JASPAR yes 35833187
chr1 226876001 226876009 PAX4 JASPAR yes 118472295
chr1 226876013 226876027 EBF1 JASPAR yes 35833188
chr1 226876013 226876027 EBF1 JASPAR yes 118472296
chr1 226876015 226876026 EBF1 JASPAR yes 35833189
chr1 226876015 226876026 EBF1 JASPAR yes 118472297
chr1 226876020 226876025 TFAP2A TRANSFAC yes 35833190
chr1 226876020 226876025 TFAP2A TRANSFAC yes 118472298
chr1 226876020 226876026 MZF1 JASPAR yes 35833191
chr1 226876020 226876026 MZF1 JASPAR yes 118472299
chr1 226876040 226876055 STAT1 JASPAR yes 35833192
chr1 226876040 226876055 STAT1 JASPAR yes 118472300
chr1 226876042 226876053 STAT1 JASPAR yes 35833193
chr1 226876042 226876053 STAT3 JASPAR yes 35833194
chr1 226876042 226876053 STAT1 JASPAR yes 118472301
chr1 226876042 226876053 STAT3 JASPAR yes 118472302
chr1 226876048 226876058 RELA JASPAR yes 35833195
chr1 226876048 226876058 RELA JASPAR yes 118472303
chr1 226876058 226876069 DMRT3 JASPAR yes 35833196
chr1 226876058 226876069 DMRT3 JASPAR yes 118472304
chr1 226876062 226876065 MYB TRANSFAC yes 35833197
chr1 226876062 226876065 MYB TRANSFAC yes 118472305
chr1 226876065 226876075 ZNF740 JASPAR yes 35833198
chr1 226876065 226876075 ZNF740 JASPAR yes 118472306
chr1 226876068 226876089 ZNF263 JASPAR yes 35833199
chr1 226876068 226876089 ZNF263 JASPAR yes 118472307
chr1 226876081 226876086 SP1 TRANSFAC yes 35833200
chr1 226876081 226876086 SP1 TRANSFAC yes 118472308
chr1 226876081 226876087 SP1 TRANSFAC yes 35833201
chr1 226876081 226876087 SP1 TRANSFAC yes 118472309
chr1 226876081 226876088 SP1 TRANSFAC yes 35833202
chr1 226876081 226876088 SP1 TRANSFAC yes 118472310
chr1 226876114 226876118 H4TF2 TRANSFAC yes 35833203
chr1 226876114 226876118 H4TF2 TRANSFAC yes 118472311
chr1 226876139 226876149 ZNF740 JASPAR yes 35833204
chr1 226876139 226876149 ZNF740 JASPAR yes 118472312
chr1 226876152 226876157 GATA1 TRANSFAC yes 35833205
chr1 226876152 226876157 GATA1 TRANSFAC yes 118472313
chr1 226876158 226876164 NFIC JASPAR yes 35833206
chr1 226876158 226876164 NFIC JASPAR yes 118472314
chr1 226876162 226876166 YY1 TRANSFAC yes 35833207
chr1 226876162 226876166 YY1 TRANSFAC yes 118472315
chr1 226876166 226876172 GATA3 JASPAR yes 35833208
chr1 226876166 226876172 GATA3 JASPAR yes 118472316
chr1 226876171 226876181 POU6F2 JASPAR yes 35833209
chr1 226876171 226876181 POU6F2 JASPAR yes 118472317
chr1 226876172 226876193 ZNF263 JASPAR yes 35833210
chr1 226876172 226876193 ZNF263 JASPAR yes 118472318
chr1 226876176 226876190 PLAG1 JASPAR yes 35833211
chr1 226876176 226876190 PLAG1 JASPAR yes 118472319
chr1 226876184 226876205 ZNF263 JASPAR yes 35833212
chr1 226876184 226876205 ZNF263 JASPAR yes 118472320
chr1 226876186 226876207 ZNF263 JASPAR yes 35833213
chr1 226876186 226876207 ZNF263 JASPAR yes 118472321
chr1 226876216 226876222 TCF4 TRANSFAC yes 35833214
chr1 226876216 226876222 TCF4 TRANSFAC yes 118472322
chr1 226876229 226876236 MEIS1 JASPAR yes 35833215
chr1 226876229 226876236 MEIS1 JASPAR yes 118472323
chr1 226876229 226876237 MEIS2 JASPAR yes 35833216
chr1 226876229 226876237 MEIS3 JASPAR yes 35833217
chr1 226876229 226876237 MEIS2 JASPAR yes 118472324
chr1 226876229 226876237 MEIS3 JASPAR yes 118472325
chr1 226876241 226876253 NHLH1 JASPAR yes 35833218
chr1 226876241 226876253 NHLH1 JASPAR yes 118472326
chr1 226876242 226876252 NHLH1 JASPAR yes 35833219
chr1 226876242 226876252 NHLH1 JASPAR yes 118472327
chr1 226876253 226876258 SP1 TRANSFAC yes 35833220
chr1 226876253 226876258 SP1 TRANSFAC yes 118472328
chr1 226876256 226876277 REST JASPAR yes 35833221
chr1 226876256 226876277 REST JASPAR yes 118472329
chr1 226876266 226876278 POU2F1 JASPAR yes 35833222
chr1 226876266 226876278 POU2F1 JASPAR yes 118472330
chr1 226876266 226876279 POU3F3 JASPAR yes 35833223
chr1 226876266 226876279 POU3F3 JASPAR yes 118472331
chr1 226876266 226876280 POU1F1 JASPAR yes 35833224
chr1 226876266 226876280 POU1F1 JASPAR yes 118472332
chr1 226876267 226876279 POU3F1 JASPAR yes 35833225
chr1 226876267 226876279 POU3F2 JASPAR yes 35833226
chr1 226876267 226876279 POU3F1 JASPAR yes 118472333
chr1 226876267 226876279 POU3F2 JASPAR yes 118472334
chr1 226876268 226876277 POU3F4 JASPAR yes 35833227
chr1 226876268 226876277 POU5F1B JASPAR yes 35833228
chr1 226876268 226876277 POU3F4 JASPAR yes 118472335
chr1 226876268 226876277 POU5F1B JASPAR yes 118472336
chr1 226876286 226876296 EN2 JASPAR yes 35833229
chr1 226876286 226876296 EN2 JASPAR yes 118472337
chr1 226876287 226876295 BARX1 JASPAR yes 35833230
chr1 226876287 226876295 BARX1 JASPAR yes 118472338
chr1 226876306 226876316 NFKB1 JASPAR yes 35833231
chr1 226876306 226876316 NFKB1 JASPAR yes 118472339
chr1 226876306 226876317 NFKB1 JASPAR yes 35833232
chr1 226876306 226876317 NFKB1 JASPAR yes 118472340
chr1 226876310 226876319 THAP1 JASPAR yes 35833233
chr1 226876310 226876319 THAP1 JASPAR yes 118472341
chr1 226876315 226876330 RUNX2 JASPAR yes 35833234
chr1 226876315 226876330 RUNX2 JASPAR yes 118472342
chr1 226876316 226876326 RUNX3 JASPAR yes 35833235
chr1 226876316 226876326 RUNX3 JASPAR yes 118472343
chr1 226876338 226876348 TFAP4 JASPAR yes 35833236
chr1 226876338 226876348 TFAP4 JASPAR yes 118472344
SNP sites on vista5378[chr1:226875915-226876346]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226875938 rs191487887 T C no 993866
chr1 226876003 rs575735463 G A
PAX4 POU2F2
993867
chr1 226876013 rs537841520 A G
EBF1
993868
chr1 226876172 rs574741794 G A
GATA3 POU6F2 ZNF263
993869
chr1 226876256 rs550781284 G C
REST SP1
993870
Genes possibly regulated by vista5378[chr1:226875915-226876346]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226819391 226927024 - ITPKB ENSG00000143772.5 226927024 0.8 0.99 1902 49322
Expression level of Genes
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miRNAs possibly regulated by vista5378[chr1:226875915-226876346]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results