EnhancerDB
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  3. vista53781[chr6:138280144-138280298]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53781[chr6:138280144-138280298]
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Tissue distribution of vista53781
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Transcription factor that possibly regulate vista53781[chr6:138280144-138280298]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 138280143 138280152 NKX3-2 JASPAR yes 70448507
chr6 138280143 138280152 NKX3-2 JASPAR yes 105697106
chr6 138280161 138280165 YY1 TRANSFAC yes 70448508
chr6 138280161 138280165 YY1 TRANSFAC yes 105697107
chr6 138280184 138280188 YY1 TRANSFAC yes 70448509
chr6 138280184 138280188 YY1 TRANSFAC yes 105697108
chr6 138280190 138280202 POU2F1 JASPAR yes 70448510
chr6 138280190 138280202 POU2F1 JASPAR yes 105697109
chr6 138280191 138280200 POU3F4 JASPAR yes 70448511
chr6 138280191 138280200 POU3F4 JASPAR yes 105697110
chr6 138280192 138280207 ESR2 JASPAR yes 70448512
chr6 138280192 138280207 ESR2 JASPAR yes 105697111
chr6 138280200 138280208 NR4A2 JASPAR yes 70448513
chr6 138280200 138280208 NR4A2 JASPAR yes 105697112
chr6 138280201 138280209 CREB1 JASPAR yes 70448514
chr6 138280201 138280209 CREB1 JASPAR yes 105697113
chr6 138280208 138280224 SOX8 JASPAR yes 70448515
chr6 138280208 138280224 SOX8 JASPAR yes 105697114
chr6 138280213 138280225 YY1 JASPAR yes 70448516
chr6 138280213 138280225 YY1 JASPAR yes 105697115
chr6 138280216 138280234 TP53 JASPAR yes 70448517
chr6 138280216 138280234 TP63 JASPAR yes 70448518
chr6 138280216 138280234 TP73 JASPAR yes 70448519
chr6 138280216 138280234 TP53 JASPAR yes 105697116
chr6 138280216 138280234 TP63 JASPAR yes 105697117
chr6 138280216 138280234 TP73 JASPAR yes 105697118
chr6 138280218 138280233 TP53 JASPAR yes 70448520
chr6 138280218 138280233 TP53 JASPAR yes 105697119
chr6 138280225 138280228 MYB TRANSFAC yes 70448521
chr6 138280225 138280228 MYB TRANSFAC yes 105697120
chr6 138280225 138280237 PKNOX1 JASPAR yes 70448522
chr6 138280225 138280237 PKNOX2 JASPAR yes 70448523
chr6 138280225 138280237 TGIF1 JASPAR yes 70448524
chr6 138280225 138280237 TGIF2 JASPAR yes 70448525
chr6 138280225 138280237 PKNOX1 JASPAR yes 105697121
chr6 138280225 138280237 PKNOX2 JASPAR yes 105697122
chr6 138280225 138280237 TGIF1 JASPAR yes 105697123
chr6 138280225 138280237 TGIF2 JASPAR yes 105697124
chr6 138280226 138280236 CLOCK JASPAR yes 70448526
chr6 138280226 138280236 NEUROG2 JASPAR yes 70448527
chr6 138280226 138280236 CLOCK JASPAR yes 105697125
chr6 138280226 138280236 NEUROG2 JASPAR yes 105697126
chr6 138280229 138280238 JDP2 JASPAR yes 70448528
chr6 138280229 138280238 JDP2 JASPAR yes 105697127
chr6 138280239 138280247 FEV JASPAR yes 70448529
chr6 138280239 138280247 FEV JASPAR yes 105697128
chr6 138280239 138280260 IRF1 JASPAR yes 70448530
chr6 138280239 138280260 IRF1 JASPAR yes 105697129
chr6 138280241 138280246 ETS2 TRANSFAC yes 70448531
chr6 138280241 138280246 ETS2 TRANSFAC yes 105697130
chr6 138280242 138280256 SPI1 JASPAR yes 70448532
chr6 138280242 138280256 SPIC JASPAR yes 70448533
chr6 138280242 138280256 SPI1 JASPAR yes 105697131
chr6 138280242 138280256 SPIC JASPAR yes 105697132
chr6 138280243 138280251 EHF JASPAR yes 70448534
chr6 138280243 138280251 EHF JASPAR yes 105697133
chr6 138280245 138280252 SPIB JASPAR yes 70448535
chr6 138280245 138280252 SPIB JASPAR yes 105697134
chr6 138280263 138280266 MYB TRANSFAC yes 70448536
chr6 138280263 138280266 MYB TRANSFAC yes 105697135
chr6 138280272 138280283 DMRT3 JASPAR yes 70448537
chr6 138280272 138280283 DMRT3 JASPAR yes 105697136
chr6 138280285 138280296 HOXA10 JASPAR yes 70448538
chr6 138280285 138280296 HOXA10 JASPAR yes 105697137
chr6 138280286 138280295 CDX1 JASPAR yes 70448539
chr6 138280286 138280295 CDX1 JASPAR yes 105697138
chr6 138280286 138280296 HOXA13 JASPAR yes 70448540
chr6 138280286 138280296 HOXB13 JASPAR yes 70448541
chr6 138280286 138280296 HOXD13 JASPAR yes 70448542
chr6 138280286 138280296 HOXA13 JASPAR yes 105697139
chr6 138280286 138280296 HOXB13 JASPAR yes 105697140
chr6 138280286 138280296 HOXD13 JASPAR yes 105697141
chr6 138280288 138280299 FOXC1 JASPAR yes 70448543
chr6 138280288 138280299 FOXC1 JASPAR yes 105697142
chr6 138280288 138280300 FOXC2 JASPAR yes 70448544
chr6 138280288 138280300 FOXC2 JASPAR yes 105697143
chr6 138280296 138280308 TAL1 JASPAR yes 70448545
chr6 138280296 138280308 TAL1 JASPAR yes 105697144
chr6 138280297 138280309 BHLHE23 JASPAR yes 70448546
chr6 138280297 138280309 BHLHE23 JASPAR yes 105697145
chr6 138280298 138280308 BHLHE22 JASPAR yes 70448547
chr6 138280298 138280308 NEUROD2 JASPAR yes 70448548
chr6 138280298 138280308 OLIG1 JASPAR yes 70448549
chr6 138280298 138280308 OLIG2 JASPAR yes 70448550
chr6 138280298 138280308 OLIG3 JASPAR yes 70448551
chr6 138280298 138280308 BHLHE22 JASPAR yes 105697146
chr6 138280298 138280308 NEUROD2 JASPAR yes 105697147
chr6 138280298 138280308 OLIG1 JASPAR yes 105697148
chr6 138280298 138280308 OLIG2 JASPAR yes 105697149
chr6 138280298 138280308 OLIG3 JASPAR yes 105697150
chr6 138280298 138280310 TAL1 JASPAR yes 70448552
chr6 138280298 138280310 TAL1 JASPAR yes 105697151
SNP sites on vista53781[chr6:138280144-138280298]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 138280159 rs570406972 C T no 9374346
chr6 138280174 rs79043776 T C no 9374347
chr6 138280228 rs76426328 A G,T
CLOCK MYB NEUROG2 PKNOX1 PKNOX2 TGIF1 TGIF2 TP53 TP63 TP73
9374348
chr6 138280257 rs560637090 G A
IRF1
9374349
Genes possibly regulated by vista53781[chr6:138280144-138280298]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 138188351 138204449 + TNFAIP3 ENSG00000118503.10 138188351 0.77 0.98 6991 8207
Expression level of Genes
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miRNAs possibly regulated by vista53781[chr6:138280144-138280298]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results