EnhancerDB
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  3. vista53792[chr6:138427134-138427492]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53792[chr6:138427134-138427492]
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Tissue distribution of vista53792
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Transcription factor that possibly regulate vista53792[chr6:138427134-138427492]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 138425635 138429216 POLR2A UCSC Txn Factor no Conserved 108541933
chr6 138425635 138429216 POLR2A UCSC Txn Factor no Conserved 108541934
chr6 138427134 138427146 HLF JASPAR yes 70448926
chr6 138427134 138427146 HLF JASPAR yes 105707814
chr6 138427150 138427154 LFA1 TRANSFAC yes 70448927
chr6 138427150 138427154 LFA1 TRANSFAC yes 105707815
chr6 138427155 138427173 MAFF JASPAR yes 70448928
chr6 138427155 138427173 MAFF JASPAR yes 105707816
chr6 138427157 138427168 NRL JASPAR yes 70448929
chr6 138427157 138427168 NRL JASPAR yes 105707817
chr6 138427157 138427172 MAFK JASPAR yes 70448930
chr6 138427157 138427172 MAFK JASPAR yes 105707818
chr6 138427177 138427183 ETS1 JASPAR yes 70448931
chr6 138427177 138427183 ETS1 JASPAR yes 105707819
chr6 138427180 138427186 HiNF-A TRANSFAC yes 70448932
chr6 138427180 138427186 HiNF-A TRANSFAC yes 105707820
chr6 138427182 138427194 FOXI1 JASPAR yes 70448933
chr6 138427182 138427194 FOXI1 JASPAR yes 105707821
chr6 138427183 138427197 FOXF2 JASPAR yes 70448934
chr6 138427183 138427197 FOXF2 JASPAR yes 105707822
chr6 138427183 138427198 FOXP1 JASPAR yes 70448935
chr6 138427183 138427198 FOXP1 JASPAR yes 105707823
chr6 138427186 138427197 FOXP2 JASPAR yes 70448936
chr6 138427186 138427197 FOXP2 JASPAR yes 105707824
chr6 138427186 138427198 FOXI1 JASPAR yes 70448937
chr6 138427186 138427198 FOXI1 JASPAR yes 105707825
chr6 138427196 138427201 NFY TRANSFAC yes 70448938
chr6 138427196 138427201 NFY TRANSFAC yes 105707826
chr6 138427208 138427220 TFAP2A JASPAR yes 70448939
chr6 138427208 138427220 TFAP2B JASPAR yes 70448940
chr6 138427208 138427220 TFAP2C JASPAR yes 70448941
chr6 138427208 138427220 TFAP2A JASPAR yes 105707827
chr6 138427208 138427220 TFAP2B JASPAR yes 105707828
chr6 138427208 138427220 TFAP2C JASPAR yes 105707829
chr6 138427209 138427218 TFAP2A JASPAR yes 70448942
chr6 138427209 138427218 TFAP2A JASPAR yes 105707830
chr6 138427216 138427226 NKX2-3 JASPAR yes 70448943
chr6 138427216 138427226 NKX2-3 JASPAR yes 105707831
chr6 138427217 138427226 NKX2-8 JASPAR yes 70448944
chr6 138427217 138427226 NKX2-8 JASPAR yes 105707832
chr6 138427217 138427231 TCF7L2 JASPAR yes 70448945
chr6 138427217 138427231 TCF7L2 JASPAR yes 105707833
chr6 138427221 138427227 TCF1 TRANSFAC yes 70448946
chr6 138427221 138427227 TCF1 TRANSFAC yes 105707834
chr6 138427255 138427261 HiNF-A TRANSFAC yes 70448947
chr6 138427255 138427267 IRF1 JASPAR yes 70448948
chr6 138427255 138427270 STAT2 JASPAR yes 70448949
chr6 138427256 138427271 FOXP1 JASPAR yes 70448950
chr6 138427257 138427268 FOXA1 JASPAR yes 70448951
chr6 138427259 138427270 FOXP2 JASPAR yes 70448952
chr6 138427260 138427268 FOXO3 JASPAR yes 70448953
chr6 138427282 138427286 NFE TRANSFAC yes 70448954
chr6 138427322 138427326 YY1 TRANSFAC yes 70448955
chr6 138427336 138427346 HOXA13 JASPAR yes 70448956
chr6 138427336 138427346 HOXB13 JASPAR yes 70448957
chr6 138427336 138427346 HOXD13 JASPAR yes 70448958
chr6 138427336 138427347 HOXA10 JASPAR yes 70448959
chr6 138427337 138427346 CDX1 JASPAR yes 70448960
chr6 138427357 138427377 RREB1 JASPAR yes 70448961
chr6 138427365 138427375 ZNF740 JASPAR yes 70448962
chr6 138427367 138427377 ZNF740 JASPAR yes 70448963
chr6 138427397 138427409 NHLH1 JASPAR yes 70448964
chr6 138427398 138427408 NHLH1 JASPAR yes 70448965
chr6 138427414 138427420 ZNF354C JASPAR yes 70448966
chr6 138427417 138427429 INSM1 JASPAR yes 70448967
chr6 138427417 138427431 GLIS2 JASPAR yes 70448968
chr6 138427430 138427440 SP1 JASPAR yes 70448969
chr6 138427434 138427447 NFKB1 JASPAR yes 70448970
chr6 138427435 138427446 NFKB1 JASPAR yes 70448971
chr6 138427436 138427446 NFKB1 JASPAR yes 70448972
chr6 138427436 138427446 RELA JASPAR yes 70448973
chr6 138427436 138427447 NFKB1 JASPAR yes 70448974
chr6 138427438 138427452 ZIC1 JASPAR yes 70448975
chr6 138427438 138427453 ZIC3 JASPAR yes 70448976
chr6 138427438 138427453 ZIC4 JASPAR yes 70448977
SNP sites on vista53792[chr6:138427134-138427492]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 138427179 rs2152013 G A,C
ETS1 POLR2A
9375323
chr6 138427189 rs72984652 A G
FOXF2 FOXI1 FOXP1 FOXP2 POLR2A
9375324
chr6 138427274 rs554546705 G C
POLR2A
9375325
chr6 138427420 rs143715046 C A
GLIS2 INSM1 POLR2A ZNF354C
9375326
chr6 138427424 rs2152012 C T
GLIS2 INSM1 POLR2A
9375327
chr6 138427428 rs2152011 A C
GLIS2 INSM1 POLR2A
9375328
Genes possibly regulated by vista53792[chr6:138427134-138427492]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 138409642 138428648 - PERP ENSG00000112378.11 138428648 0.93 1.0 6992 98844
chr6 138483058 138665800 + KIAA1244 ENSG00000112379.8 138483058 0.87 1.0 6993 44434
Expression level of Genes
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miRNAs possibly regulated by vista53792[chr6:138427134-138427492]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results