EnhancerDB
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  3. vista53795[chr6:138523816-138523995]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53795[chr6:138523816-138523995]
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Tissue distribution of vista53795
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Transcription factor that possibly regulate vista53795[chr6:138523816-138523995]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 138523816 138523831 FOXP1 JASPAR yes 70449087
chr6 138523817 138523832 FOXP1 JASPAR yes 70449088
chr6 138523818 138523833 FOXP1 JASPAR yes 70449089
chr6 138523818 138523839 IRF1 JASPAR yes 70449090
chr6 138523819 138523834 FOXP1 JASPAR yes 70449091
chr6 138523822 138523837 STAT2 JASPAR yes 70449092
chr6 138523846 138523850 YY1 TRANSFAC yes 70449093
chr6 138523851 138523855 YY1 TRANSFAC yes 70449094
chr6 138523855 138523866 FOXA1 JASPAR yes 70449095
chr6 138523855 138523870 FOXA1 JASPAR yes 70449096
chr6 138523856 138523863 NKX3-1 JASPAR yes 70449097
chr6 138523856 138523867 FOXB1 JASPAR yes 70449098
chr6 138523856 138523867 FOXC1 JASPAR yes 70449099
chr6 138523856 138523868 FOXC2 JASPAR yes 70449100
chr6 138523862 138523877 IRF9 JASPAR yes 70449101
chr6 138523870 138523876 TCF4 TRANSFAC yes 70449102
chr6 138523888 138523892 ESR1 TRANSFAC yes 70449103
chr6 138523905 138523916 CDX2 JASPAR yes 70449104
chr6 138523906 138523917 HOXA10 JASPAR yes 70449105
chr6 138523907 138523916 CDX1 JASPAR yes 70449106
chr6 138523907 138523917 HOXA13 JASPAR yes 70449107
chr6 138523907 138523917 HOXB13 JASPAR yes 70449108
chr6 138523907 138523917 HOXD13 JASPAR yes 70449109
chr6 138523907 138523919 MEF2B JASPAR yes 70449110
chr6 138523907 138523919 MEF2D JASPAR yes 70449111
chr6 138523908 138523920 FOXI1 JASPAR yes 70449112
chr6 138523924 138523929 ATF1 TRANSFAC yes 70449113
chr6 138523933 138523937 YY1 TRANSFAC yes 70449114
chr6 138523950 138523954 H4TF2 TRANSFAC yes 70449115
chr6 138523962 138523971 SOX9 JASPAR yes 70449116
chr6 138523963 138523978 SOX21 JASPAR yes 70449117
chr6 138523972 138523987 FOXA1 JASPAR yes 70449118
chr6 138523973 138523988 FOXP1 JASPAR yes 70449119
chr6 138523974 138523986 FOXC2 JASPAR yes 70449120
chr6 138523974 138523988 FOXF2 JASPAR yes 70449121
chr6 138523975 138523986 FOXB1 JASPAR yes 70449122
chr6 138523975 138523986 FOXC1 JASPAR yes 70449123
chr6 138523976 138523980 YY1 TRANSFAC yes 70449124
chr6 138523978 138523989 STAT1 JASPAR yes 70449125
chr6 138523983 138523987 TEAD2 TRANSFAC yes 70449126
chr6 138523983 138523988 TBP TRANSFAC yes 70449127
chr6 138523983 138523989 TFIID TRANSFAC yes 70449128
SNP sites on vista53795[chr6:138523816-138523995]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 138523833 rs55833674 A C
FOXP1 IRF1 STAT2
9375862
chr6 138523846 rs189522220 G A
YY1
9375863
chr6 138523884 rs147827758 G C no 9375864
chr6 138523928 rs7739127 C T
ATF1
9375865
Genes possibly regulated by vista53795[chr6:138523816-138523995]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 138409642 138428648 - PERP ENSG00000112378.11 138428648 0.93 1.0 6992 4832
chr6 138483058 138665800 + KIAA1244 ENSG00000112379.8 138483058 0.87 1.0 6993 59242
chr6 138537129 138539627 - PBOV1 ENSG00000254440.2 138539627 0.91 1.0 6994 84368
Expression level of Genes
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miRNAs possibly regulated by vista53795[chr6:138523816-138523995]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results